RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 A0A0G2JQZ4 141 aa6.43□□□□□ -1.38
TNFRSF1A-208ENST00000536194 H0YGX0 51 aa6.42□□□□□ -1.38
TNFRSF1A-208ENST00000536194 RPS29P62273 56 aaKnown RBP6.42□□□□□ -1.38
TNFRSF1A-208ENST00000536194 HRCT1Q6UXD1 115 aa6.41□□□□□ -1.38
TNFRSF1A-208ENST00000536194 CLEC2BQ92478 149 aa6.41□□□□□ -1.38
TNFRSF1A-208ENST00000536194 IGLV7-46A0A075B6I9 117 aa6.38□□□□□ -1.39
TNFRSF1A-208ENST00000536194 PSMB2P49721 201 aa6.38□□□□□ -1.39
TNFRSF1A-208ENST00000536194 PPDPFLQ8WWR9 84 aa6.38□□□□□ -1.39
TNFRSF1A-208ENST00000536194 IGLV8-61A0A075B6I0 122 aa6.37□□□□□ -1.39
TNFRSF1A-208ENST00000536194 A0A1B0GX51 115 aa6.37□□□□□ -1.39
TNFRSF1A-208ENST00000536194 TSTD3H0UI37 97 aa6.37□□□□□ -1.39
TNFRSF1A-208ENST00000536194 M0R143 59 aa6.37□□□□□ -1.39
TNFRSF1A-208ENST00000536194 CD164Q04900 197 aa6.37□□□□□ -1.39
TNFRSF1A-208ENST00000536194 UBR4Q5T4S7 5183 aa6.37□□□□□ -1.39
TNFRSF1A-208ENST00000536194 FP248Q71RG6 208 aaPredicted RBP6.36□□□□□ -1.39
TNFRSF1A-208ENST00000536194 F8WEM9 126 aa6.35□□□□□ -1.39
TNFRSF1A-208ENST00000536194 TPRXLQ17RH7 258 aa6.35□□□□□ -1.39
TNFRSF1A-208ENST00000536194 OCIAD2Q56VL3 154 aa6.35□□□□□ -1.39
TNFRSF1A-208ENST00000536194 IGFL1Q6UW32 110 aa6.35□□□□□ -1.39
TNFRSF1A-208ENST00000536194 H3BUT2 72 aa6.34□□□□□ -1.39
TNFRSF1A-208ENST00000536194 SNCGO76070 127 aa6.34□□□□□ -1.39
TNFRSF1A-208ENST00000536194 COX6CP09669 75 aa6.34□□□□□ -1.39
TNFRSF1A-208ENST00000536194 SNHG12Q9BXW3 62 aa6.34□□□□□ -1.39
TNFRSF1A-208ENST00000536194 NDUFV3P56181 108 aaKnown RBP6.33□□□□□ -1.4
TNFRSF1A-208ENST00000536194 Q6JHZ5 121 aa6.33□□□□□ -1.4
TNFRSF1A-208ENST00000536194 NAA38Q9BRA0 125 aaKnown RBP6.33□□□□□ -1.4
TNFRSF1A-208ENST00000536194 LIMD2Q9BT23 127 aa6.33□□□□□ -1.4
TNFRSF1A-208ENST00000536194 KRTAP13-3Q3SY46 172 aa6.32□□□□□ -1.4
TNFRSF1A-208ENST00000536194 Q5XG85 94 aa6.32□□□□□ -1.4
TNFRSF1A-208ENST00000536194 LST1O00453 97 aa6.31□□□□□ -1.4
TNFRSF1A-208ENST00000536194 DNAL4O96015 105 aa6.3□□□□□ -1.4
TNFRSF1A-208ENST00000536194 SCGB1C2P0DMR2 95 aa6.3□□□□□ -1.4
TNFRSF1A-208ENST00000536194 FABP2P12104 132 aa6.3□□□□□ -1.4
TNFRSF1A-208ENST00000536194 BATFQ16520 125 aa6.3□□□□□ -1.4
TNFRSF1A-208ENST00000536194 ORMDL1Q9P0S3 153 aa6.3□□□□□ -1.4
TNFRSF1A-208ENST00000536194 TRACP01848 142 aa6.29□□□□□ -1.4
TNFRSF1A-208ENST00000536194 TRBV7-7A0A0K0K1E9 115 aa6.28□□□□□ -1.4
TNFRSF1A-208ENST00000536194 H3BMG7 143 aa6.28□□□□□ -1.4
TNFRSF1A-208ENST00000536194 GHRHP01286 108 aa6.28□□□□□ -1.4
TNFRSF1A-208ENST00000536194 C1orf195Q5TG92 126 aa6.28□□□□□ -1.4
TNFRSF1A-208ENST00000536194 CDIP1Q9H305 208 aa6.28□□□□□ -1.4
TNFRSF1A-208ENST00000536194 TCL1BO95988 128 aa6.26□□□□□ -1.41
TNFRSF1A-208ENST00000536194 A0A1B0GV72 72 aa6.25□□□□□ -1.41
TNFRSF1A-208ENST00000536194 TMEM256-PLSCR3K7ERE1 68 aa6.25□□□□□ -1.41
TNFRSF1A-208ENST00000536194 Q6Q795 121 aa6.25□□□□□ -1.41
TNFRSF1A-208ENST00000536194 H3BQ85 93 aa6.24□□□□□ -1.41
TNFRSF1A-208ENST00000536194 ASB16-AS1Q495Z4 193 aa6.24□□□□□ -1.41
TNFRSF1A-208ENST00000536194 A0A1W2PNM2 257 aa6.23□□□□□ -1.41
TNFRSF1A-208ENST00000536194 TAX1BP3O14907 124 aa6.23□□□□□ -1.41
TNFRSF1A-208ENST00000536194 UBE2V1Q13404 147 aa6.23□□□□□ -1.41
TNFRSF1A-208ENST00000536194 TEN1Q86WV5 123 aa6.23□□□□□ -1.41
TNFRSF1A-208ENST00000536194 ATXN8Q156A1 80 aa6.22□□□□□ -1.41
TNFRSF1A-208ENST00000536194 BAALC-AS2P0C853 105 aa6.21□□□□□ -1.42
TNFRSF1A-208ENST00000536194 XP32Q5T750 250 aa6.21□□□□□ -1.42
TNFRSF1A-208ENST00000536194 RNF213Q63HN8 5207 aa6.2□□□□□ -1.42
TNFRSF1A-208ENST00000536194 A0A087WSZ3 146 aa6.2□□□□□ -1.42
TNFRSF1A-208ENST00000536194 C9orf92A6NGG3 77 aa6.2□□□□□ -1.42
TNFRSF1A-208ENST00000536194 C9orf118A6NHY6 69 aa6.2□□□□□ -1.42
TNFRSF1A-208ENST00000536194 TRBV7-4A0A0J9YYF1 115 aa6.19□□□□□ -1.42
TNFRSF1A-208ENST00000536194 ANKRD29Q8N6D5 301 aa6.19□□□□□ -1.42
TNFRSF1A-208ENST00000536194 A0A1W2PPM0 123 aa6.18□□□□□ -1.42
TNFRSF1A-208ENST00000536194 LYRM7Q5U5X0 104 aa6.18□□□□□ -1.42
TNFRSF1A-208ENST00000536194 MUC17Q685J3 4493 aa6.18□□□□□ -1.42
TNFRSF1A-208ENST00000536194 TRBV20-1A0A075B6N2 111 aa6.17□□□□□ -1.42
TNFRSF1A-208ENST00000536194 Q96NJ1 140 aa6.17□□□□□ -1.42
TNFRSF1A-208ENST00000536194 CCKP06307 115 aa6.16□□□□□ -1.42
TNFRSF1A-208ENST00000536194 RBM3P98179 157 aaKnown RBP6.16□□□□□ -1.42
TNFRSF1A-208ENST00000536194 SS18L2Q9UHA2 77 aa6.16□□□□□ -1.42
TNFRSF1A-208ENST00000536194 C9JAW5 83 aa6.15□□□□□ -1.42
TNFRSF1A-208ENST00000536194 MTURNQ8N3F0 131 aa6.13□□□□□ -1.43
TNFRSF1A-208ENST00000536194 DSCR8Q96T75 97 aa6.13□□□□□ -1.43
TNFRSF1A-208ENST00000536194 KRTAP4-1Q9BYQ7 146 aa6.13□□□□□ -1.43
TNFRSF1A-208ENST00000536194 PCP4L1A6NKN8 68 aa6.12□□□□□ -1.43
TNFRSF1A-208ENST00000536194 COL5A1-AS1Q5SY13 56 aa6.12□□□□□ -1.43
TNFRSF1A-208ENST00000536194 MUC2Q02817 5179 aa6.11□□□□□ -1.43
TNFRSF1A-208ENST00000536194 SEC61BP60468 96 aaKnown RBP6.11□□□□□ -1.43
TNFRSF1A-208ENST00000536194 OBSCN-AS1Q96MR7 158 aa6.11□□□□□ -1.43
TNFRSF1A-208ENST00000536194 VPS25Q9BRG1 176 aa6.11□□□□□ -1.43
TNFRSF1A-208ENST00000536194 JMJD7-PLA2G4BH0Y9G9 81 aa6.1□□□□□ -1.43
TNFRSF1A-208ENST00000536194 Q6ZQT0 140 aa6.1□□□□□ -1.43
TNFRSF1A-208ENST00000536194 C14orf132Q9NPU4 83 aa6.1□□□□□ -1.43
TNFRSF1A-208ENST00000536194 SPCS1Q9Y6A9 102 aa6.1□□□□□ -1.43
TNFRSF1A-208ENST00000536194 LOC110117498A0A087WWA1 95 aa6.09□□□□□ -1.43
TNFRSF1A-208ENST00000536194 H3BT86 120 aa6.09□□□□□ -1.43
TNFRSF1A-208ENST00000536194 LINC00472Q9H8W2 130 aa6.09□□□□□ -1.43
TNFRSF1A-208ENST00000536194 RPL37P61927 97 aaKnown RBP6.07□□□□□ -1.44
TNFRSF1A-208ENST00000536194 DEFB116Q30KQ4 102 aa6.07□□□□□ -1.44
TNFRSF1A-208ENST00000536194 PCOTHQ58A44 107 aa6.07□□□□□ -1.44
TNFRSF1A-208ENST00000536194 IGKV4-1P06312 121 aa6.06□□□□□ -1.44
TNFRSF1A-208ENST00000536194 SMCPP49901 116 aaPredicted RBP6.06□□□□□ -1.44
TNFRSF1A-208ENST00000536194 SIGMAR1Q99720 223 aa6.06□□□□□ -1.44
TNFRSF1A-208ENST00000536194 K7EP34 96 aa6.04□□□□□ -1.44
TNFRSF1A-208ENST00000536194 PDE6GP18545 87 aa6.04□□□□□ -1.44
TNFRSF1A-208ENST00000536194 PRO0461Q9UI25 63 aa6.04□□□□□ -1.44
TNFRSF1A-208ENST00000536194 DSCR10P59022 87 aa6.03□□□□□ -1.44
TNFRSF1A-208ENST00000536194 NOTCH2NLQ7Z3S9 236 aa6.02□□□□□ -1.45
TNFRSF1A-208ENST00000536194 A0A1B0GW54 56 aa6.01□□□□□ -1.45
TNFRSF1A-208ENST00000536194 C21orf62-AS1Q17RA5 79 aa6.01□□□□□ -1.45
TNFRSF1A-208ENST00000536194 Q75L30 129 aa6.01□□□□□ -1.45
TNFRSF1A-208ENST00000536194 KRTAP16-1A8MUX0 517 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms