RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 SCXQ7RTU7 201 aa12.88□□□□□ -0.35
PDXDC1-205ENST00000535621 SIGMAR1Q99720 223 aa12.88□□□□□ -0.35
PDXDC1-205ENST00000535621 PDE6GP18545 87 aa12.88□□□□□ -0.35
PDXDC1-205ENST00000535621 SMIM29Q86T20 159 aa12.86□□□□□ -0.35
PDXDC1-205ENST00000535621 LINC00846Q9NV44 126 aa12.84□□□□□ -0.35
PDXDC1-205ENST00000535621 MT-ATP8P03928 68 aa12.84□□□□□ -0.35
PDXDC1-205ENST00000535621 C1orf137Q5JT78 98 aa12.84□□□□□ -0.35
PDXDC1-205ENST00000535621 APOBP04114 4563 aaKnown RBP12.81□□□□□ -0.36
PDXDC1-205ENST00000535621 SPRR1BP22528 89 aa12.79□□□□□ -0.36
PDXDC1-205ENST00000535621 ZNF861PO60384 105 aa12.78□□□□□ -0.36
PDXDC1-205ENST00000535621 LINC00643Q86TS7 51 aa12.76□□□□□ -0.37
PDXDC1-205ENST00000535621 F8WEM9 126 aa12.74□□□□□ -0.37
PDXDC1-205ENST00000535621 IGLV7-43P04211 117 aa12.74□□□□□ -0.37
PDXDC1-205ENST00000535621 IGLV8-61A0A075B6I0 122 aa12.72□□□□□ -0.37
PDXDC1-205ENST00000535621 SPRR4Q96PI1 79 aa12.72□□□□□ -0.37
PDXDC1-205ENST00000535621 EPPK1P58107 5090 aaKnown RBP12.71□□□□□ -0.38
PDXDC1-205ENST00000535621 VPS13BQ7Z7G8 4022 aa12.69□□□□□ -0.38
PDXDC1-205ENST00000535621 A0A1W2PNM2 257 aa12.69□□□□□ -0.38
PDXDC1-205ENST00000535621 UBL5Q9BZL1 73 aa12.69□□□□□ -0.38
PDXDC1-205ENST00000535621 LINC00483Q53H64 154 aa12.68□□□□□ -0.38
PDXDC1-205ENST00000535621 ZNF706Q9Y5V0 76 aaPredicted RBP12.68□□□□□ -0.38
PDXDC1-205ENST00000535621 IGFL1Q6UW32 110 aa12.67□□□□□ -0.38
PDXDC1-205ENST00000535621 Q8NBF4 154 aa12.66□□□□□ -0.38
PDXDC1-205ENST00000535621 FAT1Q14517 4588 aa12.65□□□□□ -0.38
PDXDC1-205ENST00000535621 TRBV7-7A0A0K0K1E9 115 aa12.65□□□□□ -0.38
PDXDC1-205ENST00000535621 A0A0G2JQZ4 141 aa12.64□□□□□ -0.39
PDXDC1-205ENST00000535621 SMR3BP02814 79 aaPredicted RBP12.64□□□□□ -0.39
PDXDC1-205ENST00000535621 Q6JHZ5 121 aa12.64□□□□□ -0.39
PDXDC1-205ENST00000535621 Q6ZVQ6 151 aa12.64□□□□□ -0.39
PDXDC1-205ENST00000535621 A0A1B0GW54 56 aa12.63□□□□□ -0.39
PDXDC1-205ENST00000535621 SCGB1A1P11684 91 aa12.63□□□□□ -0.39
PDXDC1-205ENST00000535621 Q6Q795 121 aa12.61□□□□□ -0.39
PDXDC1-205ENST00000535621 IGKV3D-7A0A0C4DH55 119 aa12.6□□□□□ -0.39
PDXDC1-205ENST00000535621 CRYGAP11844 174 aa12.59□□□□□ -0.39
PDXDC1-205ENST00000535621 IMUPQ9GZP8 106 aa12.59□□□□□ -0.39
PDXDC1-205ENST00000535621 ANAPC11Q9NYG5 84 aa12.58□□□□□ -0.4
PDXDC1-205ENST00000535621 ATP5EP2Q5VTU8 51 aa12.57□□□□□ -0.4
PDXDC1-205ENST00000535621 IGLV9-49A0A0B4J1Y8 123 aa12.56□□□□□ -0.4
PDXDC1-205ENST00000535621 HSPG2P98160 4391 aa12.55□□□□□ -0.4
PDXDC1-205ENST00000535621 NREPQ16612 68 aa12.54□□□□□ -0.4
PDXDC1-205ENST00000535621 C9orf153Q5TBE3 101 aa12.53□□□□□ -0.4
PDXDC1-205ENST00000535621 KIAA1109Q2LD37 5005 aa12.51□□□□□ -0.41
PDXDC1-205ENST00000535621 RYR1P21817 5038 aa12.51□□□□□ -0.41
PDXDC1-205ENST00000535621 RPL37AP61513 92 aaKnown RBP12.5□□□□□ -0.41
PDXDC1-205ENST00000535621 CXCL6P80162 114 aa12.5□□□□□ -0.41
PDXDC1-205ENST00000535621 MOBPQ13875 183 aa12.49□□□□□ -0.41
PDXDC1-205ENST00000535621 A0A087WSZ3 146 aa12.47□□□□□ -0.41
PDXDC1-205ENST00000535621 HIST1H4AP62805 103 aaKnown RBP12.45□□□□□ -0.42
PDXDC1-205ENST00000535621 KRTAP10-4P60372 401 aaPredicted RBP12.44□□□□□ -0.42
PDXDC1-205ENST00000535621 KRTAP17-1Q9BYP8 105 aa12.44□□□□□ -0.42
PDXDC1-205ENST00000535621 A0A087WVE0 104 aa12.44□□□□□ -0.42
PDXDC1-205ENST00000535621 FAM236AA0A1B0GUQ0 79 aa12.41□□□□□ -0.42
PDXDC1-205ENST00000535621 FAM236BA0A1B0GV22 79 aa12.41□□□□□ -0.42
PDXDC1-205ENST00000535621 BPY2O14599 106 aa12.41□□□□□ -0.42
PDXDC1-205ENST00000535621 CDK2AP2O75956 126 aa12.41□□□□□ -0.42
PDXDC1-205ENST00000535621 KRTAP1-4P0C5Y4 121 aa12.4□□□□□ -0.42
PDXDC1-205ENST00000535621 A0A087X002 238 aa12.38□□□□□ -0.43
PDXDC1-205ENST00000535621 FAM229BQ4G0N7 80 aa12.37□□□□□ -0.43
PDXDC1-205ENST00000535621 SPINK6Q6UWN8 80 aa12.37□□□□□ -0.43
PDXDC1-205ENST00000535621 HRCT1Q6UXD1 115 aa12.36□□□□□ -0.43
PDXDC1-205ENST00000535621 SSBP3-AS1Q7Z2R9 100 aa12.35□□□□□ -0.43
PDXDC1-205ENST00000535621 KRTAP13-2Q52LG2 175 aa12.34□□□□□ -0.43
PDXDC1-205ENST00000535621 Q8N9L7 120 aa12.34□□□□□ -0.43
PDXDC1-205ENST00000535621 DSCR10P59022 87 aa12.32□□□□□ -0.44
PDXDC1-205ENST00000535621 IGKV4-1P06312 121 aa12.31□□□□□ -0.44
PDXDC1-205ENST00000535621 DEFB116Q30KQ4 102 aa12.31□□□□□ -0.44
PDXDC1-205ENST00000535621 Q5VSD8 79 aa12.31□□□□□ -0.44
PDXDC1-205ENST00000535621 LINC00472Q9H8W2 130 aa12.31□□□□□ -0.44
PDXDC1-205ENST00000535621 PLA2G1BP04054 148 aaKnown RBP12.3□□□□□ -0.44
PDXDC1-205ENST00000535621 ANAPC13Q9BS18 74 aa12.29□□□□□ -0.44
PDXDC1-205ENST00000535621 PKHD1L1Q86WI1 4243 aa12.28□□□□□ -0.44
PDXDC1-205ENST00000535621 FAM229AH3BQW9 127 aa12.28□□□□□ -0.44
PDXDC1-205ENST00000535621 CD164Q04900 197 aa12.27□□□□□ -0.44
PDXDC1-205ENST00000535621 SS18L2Q9UHA2 77 aa12.27□□□□□ -0.45
PDXDC1-205ENST00000535621 K7EQZ3 153 aa12.25□□□□□ -0.45
PDXDC1-205ENST00000535621 Q96NJ1 140 aa12.23□□□□□ -0.45
PDXDC1-205ENST00000535621 ATOX1O00244 68 aa12.22□□□□□ -0.45
PDXDC1-205ENST00000535621 BIRC6Q9NR09 4857 aa12.2□□□□□ -0.46
PDXDC1-205ENST00000535621 J3KT08 172 aa12.18□□□□□ -0.46
PDXDC1-205ENST00000535621 Q8N1X5 172 aa12.17□□□□□ -0.46
PDXDC1-205ENST00000535621 TYMSOSQ8TAI1 123 aa12.17□□□□□ -0.46
PDXDC1-205ENST00000535621 LRP1Q07954 4544 aaKnown RBP12.17□□□□□ -0.46
PDXDC1-205ENST00000535621 A8MWP4 228 aa12.16□□□□□ -0.46
PDXDC1-205ENST00000535621 PRR26Q8N8Z3 221 aa12.15□□□□□ -0.46
PDXDC1-205ENST00000535621 FLG2Q5D862 2391 aaPredicted RBP12.13□□□□□ -0.47
PDXDC1-205ENST00000535621 PRR15Q8IV56 129 aa12.13□□□□□ -0.47
PDXDC1-205ENST00000535621 KRTAP4-5Q9BYR2 181 aa12.11□□□□□ -0.47
PDXDC1-205ENST00000535621 ASB16-AS1Q495Z4 193 aa12.11□□□□□ -0.47
PDXDC1-205ENST00000535621 Q5XG85 94 aa12.1□□□□□ -0.47
PDXDC1-205ENST00000535621 HCG22E2RYF7 251 aa12.08□□□□□ -0.48
PDXDC1-205ENST00000535621 SERP2Q8N6R1 65 aa12.08□□□□□ -0.48
PDXDC1-205ENST00000535621 NDUFB1O75438 58 aa12.06□□□□□ -0.48
PDXDC1-205ENST00000535621 FAT3Q8TDW7 4589 aa12.06□□□□□ -0.48
PDXDC1-205ENST00000535621 CCDC179H3BU77 68 aa12.06□□□□□ -0.48
PDXDC1-205ENST00000535621 C4orf48Q5BLP8 95 aa12.06□□□□□ -0.48
PDXDC1-205ENST00000535621 COX7CP15954 63 aa12.05□□□□□ -0.48
PDXDC1-205ENST00000535621 MYCBP2O75592 4640 aa12.05□□□□□ -0.48
PDXDC1-205ENST00000535621 SPINK1P00995 79 aa12.04□□□□□ -0.48
PDXDC1-205ENST00000535621 SMIM20Q8N5G0 67 aa12.04□□□□□ -0.48
PDXDC1-205ENST00000535621 LIMD2Q9BT23 127 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms