RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 HRCT1Q6UXD1 115 aa12.47□□□□□ -0.41
SSPN-204ENST00000535504 CD164Q04900 197 aa12.46□□□□□ -0.41
SSPN-204ENST00000535504 OCIAD2Q56VL3 154 aa12.46□□□□□ -0.41
SSPN-204ENST00000535504 LRP2P98164 4655 aa12.45□□□□□ -0.42
SSPN-204ENST00000535504 SMIM29Q86T20 159 aa12.45□□□□□ -0.42
SSPN-204ENST00000535504 SNHG12Q9BXW3 62 aa12.45□□□□□ -0.42
SSPN-204ENST00000535504 CDIP1Q9H305 208 aa12.45□□□□□ -0.42
SSPN-204ENST00000535504 SMIM6P0DI80 62 aa12.44□□□□□ -0.42
SSPN-204ENST00000535504 PSMB2P49721 201 aa12.44□□□□□ -0.42
SSPN-204ENST00000535504 COX6CP09669 75 aa12.43□□□□□ -0.42
SSPN-204ENST00000535504 TPRXLQ17RH7 258 aa12.43□□□□□ -0.42
SSPN-204ENST00000535504 A0A1B0GX51 115 aa12.41□□□□□ -0.42
SSPN-204ENST00000535504 Q6JHZ5 121 aa12.4□□□□□ -0.42
SSPN-204ENST00000535504 DNAL4O96015 105 aa12.38□□□□□ -0.43
SSPN-204ENST00000535504 TRIAP1O43715 76 aa12.37□□□□□ -0.43
SSPN-204ENST00000535504 UBR4Q5T4S7 5183 aa12.36□□□□□ -0.43
SSPN-204ENST00000535504 K7ERJ3 54 aa12.36□□□□□ -0.43
SSPN-204ENST00000535504 M0R143 59 aa12.35□□□□□ -0.43
SSPN-204ENST00000535504 TCL1BO95988 128 aa12.33□□□□□ -0.44
SSPN-204ENST00000535504 CLEC2BQ92478 149 aa12.33□□□□□ -0.44
SSPN-204ENST00000535504 H3BQ85 93 aa12.32□□□□□ -0.44
SSPN-204ENST00000535504 FAM218AQ96MZ4 157 aa12.32□□□□□ -0.44
SSPN-204ENST00000535504 LPAP08519 4548 aa12.31□□□□□ -0.44
SSPN-204ENST00000535504 TSTD3H0UI37 97 aa12.31□□□□□ -0.44
SSPN-204ENST00000535504 IGLV8-61A0A075B6I0 122 aa12.3□□□□□ -0.44
SSPN-204ENST00000535504 SCGB1C2P0DMR2 95 aa12.3□□□□□ -0.44
SSPN-204ENST00000535504 FABP2P12104 132 aa12.29□□□□□ -0.44
SSPN-204ENST00000535504 Q5XG85 94 aa12.28□□□□□ -0.44
SSPN-204ENST00000535504 ORMDL1Q9P0S3 153 aa12.27□□□□□ -0.45
SSPN-204ENST00000535504 A0A0G2JQZ4 141 aa12.26□□□□□ -0.45
SSPN-204ENST00000535504 NDUFV3P56181 108 aaKnown RBP12.26□□□□□ -0.45
SSPN-204ENST00000535504 IGFL1Q6UW32 110 aa12.26□□□□□ -0.45
SSPN-204ENST00000535504 KRTAP13-3Q3SY46 172 aa12.25□□□□□ -0.45
SSPN-204ENST00000535504 H3BUT2 72 aa12.23□□□□□ -0.45
SSPN-204ENST00000535504 TRBV7-7A0A0K0K1E9 115 aa12.21□□□□□ -0.45
SSPN-204ENST00000535504 H3BMG7 143 aa12.2□□□□□ -0.46
SSPN-204ENST00000535504 TMEM256-PLSCR3K7ERE1 68 aa12.2□□□□□ -0.46
SSPN-204ENST00000535504 LOC105371267A0A1B0GV96 52 aa12.18□□□□□ -0.46
SSPN-204ENST00000535504 TRACP01848 142 aa12.17□□□□□ -0.46
SSPN-204ENST00000535504 SS18L2Q9UHA2 77 aa12.17□□□□□ -0.46
SSPN-204ENST00000535504 C1orf195Q5TG92 126 aa12.15□□□□□ -0.46
SSPN-204ENST00000535504 TEN1Q86WV5 123 aa12.15□□□□□ -0.46
SSPN-204ENST00000535504 A0A0U1RQV1 116 aa12.14□□□□□ -0.47
SSPN-204ENST00000535504 LYRM7Q5U5X0 104 aa12.14□□□□□ -0.47
SSPN-204ENST00000535504 LST1O00453 97 aa12.13□□□□□ -0.47
SSPN-204ENST00000535504 SEC61BP60468 96 aaKnown RBP12.13□□□□□ -0.47
SSPN-204ENST00000535504 BATFQ16520 125 aa12.12□□□□□ -0.47
SSPN-204ENST00000535504 ASB16-AS1Q495Z4 193 aa12.12□□□□□ -0.47
SSPN-204ENST00000535504 Q6Q795 121 aa12.11□□□□□ -0.47
SSPN-204ENST00000535504 ANKRD29Q8N6D5 301 aa12.1□□□□□ -0.47
SSPN-204ENST00000535504 UBE2V1Q13404 147 aa12.09□□□□□ -0.47
SSPN-204ENST00000535504 ATXN8Q156A1 80 aa12.09□□□□□ -0.47
SSPN-204ENST00000535504 C9orf92A6NGG3 77 aa12.08□□□□□ -0.48
SSPN-204ENST00000535504 A0A1B0GV72 72 aa12.06□□□□□ -0.48
SSPN-204ENST00000535504 XP32Q5T750 250 aa12.05□□□□□ -0.48
SSPN-204ENST00000535504 A0A087WSZ3 146 aa12.03□□□□□ -0.48
SSPN-204ENST00000535504 RNF213Q63HN8 5207 aa12.03□□□□□ -0.48
SSPN-204ENST00000535504 NAA38Q9BRA0 125 aaKnown RBP12.02□□□□□ -0.49
SSPN-204ENST00000535504 BAALC-AS2P0C853 105 aa12.01□□□□□ -0.49
SSPN-204ENST00000535504 RBM3P98179 157 aaKnown RBP12□□□□□ -0.49
SSPN-204ENST00000535504 DSCR8Q96T75 97 aa12□□□□□ -0.49
SSPN-204ENST00000535504 TRBV20-1A0A075B6N2 111 aa11.98□□□□□ -0.49
SSPN-204ENST00000535504 TRBV7-4A0A0J9YYF1 115 aa11.98□□□□□ -0.49
SSPN-204ENST00000535504 CCKP06307 115 aa11.98□□□□□ -0.49
SSPN-204ENST00000535504 A0A1W2PNM2 257 aa11.95□□□□□ -0.5
SSPN-204ENST00000535504 VPS25Q9BRG1 176 aa11.95□□□□□ -0.5
SSPN-204ENST00000535504 JMJD7-PLA2G4BH0Y9G9 81 aa11.92□□□□□ -0.5
SSPN-204ENST00000535504 C21orf62-AS1Q17RA5 79 aa11.92□□□□□ -0.5
SSPN-204ENST00000535504 C9JAW5 83 aa11.91□□□□□ -0.5
SSPN-204ENST00000535504 C9orf118A6NHY6 69 aa11.9□□□□□ -0.5
SSPN-204ENST00000535504 SIGMAR1Q99720 223 aa11.89□□□□□ -0.51
SSPN-204ENST00000535504 MUC17Q685J3 4493 aa11.88□□□□□ -0.51
SSPN-204ENST00000535504 PCOTHQ58A44 107 aa11.85□□□□□ -0.51
SSPN-204ENST00000535504 OBSCN-AS1Q96MR7 158 aa11.85□□□□□ -0.51
SSPN-204ENST00000535504 PDE6GP18545 87 aa11.84□□□□□ -0.51
SSPN-204ENST00000535504 A0A1W2PPM0 123 aa11.83□□□□□ -0.52
SSPN-204ENST00000535504 TAX1BP3O14907 124 aa11.83□□□□□ -0.52
SSPN-204ENST00000535504 RPL37P61927 97 aaKnown RBP11.83□□□□□ -0.52
SSPN-204ENST00000535504 IGKV4-1P06312 121 aa11.82□□□□□ -0.52
SSPN-204ENST00000535504 Q96NJ1 140 aa11.79□□□□□ -0.52
SSPN-204ENST00000535504 COL5A1-AS1Q5SY13 56 aa11.78□□□□□ -0.52
SSPN-204ENST00000535504 MUC2Q02817 5179 aa11.77□□□□□ -0.52
SSPN-204ENST00000535504 H3BT86 120 aa11.77□□□□□ -0.53
SSPN-204ENST00000535504 LOC110117498A0A087WWA1 95 aa11.76□□□□□ -0.53
SSPN-204ENST00000535504 A0A1B0GW54 56 aa11.76□□□□□ -0.53
SSPN-204ENST00000535504 ATP11AUNQ6ZP68 121 aa11.76□□□□□ -0.53
SSPN-204ENST00000535504 C14orf132Q9NPU4 83 aa11.74□□□□□ -0.53
SSPN-204ENST00000535504 Q6ZQT0 140 aa11.73□□□□□ -0.53
SSPN-204ENST00000535504 Q75L30 129 aa11.73□□□□□ -0.53
SSPN-204ENST00000535504 SPCS1Q9Y6A9 102 aa11.73□□□□□ -0.53
SSPN-204ENST00000535504 LINC00313P59037 77 aa11.72□□□□□ -0.53
SSPN-204ENST00000535504 LINC00472Q9H8W2 130 aa11.72□□□□□ -0.53
SSPN-204ENST00000535504 J3KT08 172 aa11.71□□□□□ -0.53
SSPN-204ENST00000535504 DEFB116Q30KQ4 102 aa11.71□□□□□ -0.53
SSPN-204ENST00000535504 DSCR10P59022 87 aa11.7□□□□□ -0.54
SSPN-204ENST00000535504 KRTAP4-1Q9BYQ7 146 aa11.67□□□□□ -0.54
SSPN-204ENST00000535504 IGHV6-1A0A0B4J1U7 121 aa11.66□□□□□ -0.54
SSPN-204ENST00000535504 PCP4L1A6NKN8 68 aa11.66□□□□□ -0.54
SSPN-204ENST00000535504 NDUFB1O75438 58 aa11.66□□□□□ -0.54
SSPN-204ENST00000535504 MTURNQ8N3F0 131 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms