RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 ZNF706Q9Y5V0 76 aaPredicted RBP14.54□□□□□ -0.08
PTPMT1-205ENST00000534775 LINC00846Q9NV44 126 aa14.53□□□□□ -0.08
PTPMT1-205ENST00000534775 IGLV7-43P04211 117 aa14.52□□□□□ -0.08
PTPMT1-205ENST00000534775 DNAH8Q96JB1 4490 aa14.51□□□□□ -0.09
PTPMT1-205ENST00000534775 LINC00643Q86TS7 51 aa14.51□□□□□ -0.09
PTPMT1-205ENST00000534775 MT-ATP8P03928 68 aa14.5□□□□□ -0.09
PTPMT1-205ENST00000534775 HAMPP81172 84 aa14.48□□□□□ -0.09
PTPMT1-205ENST00000534775 SPRR4Q96PI1 79 aa14.48□□□□□ -0.09
PTPMT1-205ENST00000534775 IGLV8-61A0A075B6I0 122 aa14.48□□□□□ -0.09
PTPMT1-205ENST00000534775 RYR3Q15413 4870 aa14.47□□□□□ -0.09
PTPMT1-205ENST00000534775 UBL5Q9BZL1 73 aa14.46□□□□□ -0.09
PTPMT1-205ENST00000534775 A0A1B0GW54 56 aa14.44□□□□□ -0.1
PTPMT1-205ENST00000534775 LINC00483Q53H64 154 aa14.44□□□□□ -0.1
PTPMT1-205ENST00000534775 Q6JHZ5 121 aa14.41□□□□□ -0.1
PTPMT1-205ENST00000534775 Q8NBF4 154 aa14.41□□□□□ -0.1
PTPMT1-205ENST00000534775 A0A1W2PNM2 257 aa14.39□□□□□ -0.11
PTPMT1-205ENST00000534775 IGFL1Q6UW32 110 aa14.39□□□□□ -0.11
PTPMT1-205ENST00000534775 PKHD1P08F94 4074 aa14.38□□□□□ -0.11
PTPMT1-205ENST00000534775 ATP5EP2Q5VTU8 51 aa14.35□□□□□ -0.11
PTPMT1-205ENST00000534775 TRBV7-7A0A0K0K1E9 115 aa14.34□□□□□ -0.11
PTPMT1-205ENST00000534775 Q6ZVQ6 151 aa14.34□□□□□ -0.11
PTPMT1-205ENST00000534775 SCGB1A1P11684 91 aa14.33□□□□□ -0.12
PTPMT1-205ENST00000534775 Q6Q795 121 aa14.33□□□□□ -0.12
PTPMT1-205ENST00000534775 IMUPQ9GZP8 106 aa14.33□□□□□ -0.12
PTPMT1-205ENST00000534775 CRYGAP11844 174 aa14.32□□□□□ -0.12
PTPMT1-205ENST00000534775 SRRM2Q9UQ35 2752 aaKnown RBP14.31□□□□□ -0.12
PTPMT1-205ENST00000534775 RPL37AP61513 92 aaKnown RBP14.3□□□□□ -0.12
PTPMT1-205ENST00000534775 C9orf153Q5TBE3 101 aa14.3□□□□□ -0.12
PTPMT1-205ENST00000534775 IGLV9-49A0A0B4J1Y8 123 aa14.3□□□□□ -0.12
PTPMT1-205ENST00000534775 LRP1BQ9NZR2 4599 aa14.29□□□□□ -0.12
PTPMT1-205ENST00000534775 DYNC1H1Q14204 4646 aaKnown RBP14.29□□□□□ -0.12
PTPMT1-205ENST00000534775 IGKV3D-7A0A0C4DH55 119 aa14.28□□□□□ -0.12
PTPMT1-205ENST00000534775 NREPQ16612 68 aa14.28□□□□□ -0.12
PTPMT1-205ENST00000534775 A0A0G2JQZ4 141 aa14.26□□□□□ -0.13
PTPMT1-205ENST00000534775 ANAPC11Q9NYG5 84 aa14.24□□□□□ -0.13
PTPMT1-205ENST00000534775 CXCL6P80162 114 aa14.23□□□□□ -0.13
PTPMT1-205ENST00000534775 MOBPQ13875 183 aa14.22□□□□□ -0.13
PTPMT1-205ENST00000534775 A0A087WSZ3 146 aa14.17□□□□□ -0.14
PTPMT1-205ENST00000534775 SMR3BP02814 79 aaPredicted RBP14.16□□□□□ -0.14
PTPMT1-205ENST00000534775 FAM229BQ4G0N7 80 aa14.16□□□□□ -0.14
PTPMT1-205ENST00000534775 SPINK6Q6UWN8 80 aa14.15□□□□□ -0.14
PTPMT1-205ENST00000534775 BPY2O14599 106 aa14.14□□□□□ -0.15
PTPMT1-205ENST00000534775 HIST1H4AP62805 103 aaKnown RBP14.14□□□□□ -0.15
PTPMT1-205ENST00000534775 APOBP04114 4563 aaKnown RBP14.12□□□□□ -0.15
PTPMT1-205ENST00000534775 SSBP3-AS1Q7Z2R9 100 aa14.12□□□□□ -0.15
PTPMT1-205ENST00000534775 PCP4P48539 62 aa14.08□□□□□ -0.15
PTPMT1-205ENST00000534775 FAM236AA0A1B0GUQ0 79 aa14.07□□□□□ -0.16
PTPMT1-205ENST00000534775 FAM236BA0A1B0GV22 79 aa14.07□□□□□ -0.16
PTPMT1-205ENST00000534775 KRTAP1-4P0C5Y4 121 aa14.07□□□□□ -0.16
PTPMT1-205ENST00000534775 A0A087WVE0 104 aa14.04□□□□□ -0.16
PTPMT1-205ENST00000534775 A0A087X002 238 aa14.04□□□□□ -0.16
PTPMT1-205ENST00000534775 HRCT1Q6UXD1 115 aa14.04□□□□□ -0.16
PTPMT1-205ENST00000534775 SS18L2Q9UHA2 77 aa14.04□□□□□ -0.16
PTPMT1-205ENST00000534775 CD164Q04900 197 aa14.03□□□□□ -0.16
PTPMT1-205ENST00000534775 VPS13BQ7Z7G8 4022 aa14.02□□□□□ -0.17
PTPMT1-205ENST00000534775 CDK2AP2O75956 126 aa14.01□□□□□ -0.17
PTPMT1-205ENST00000534775 PLA2G1BP04054 148 aaKnown RBP14.01□□□□□ -0.17
PTPMT1-205ENST00000534775 KRTAP13-2Q52LG2 175 aa14.01□□□□□ -0.17
PTPMT1-205ENST00000534775 KRTAP10-4P60372 401 aaPredicted RBP14.01□□□□□ -0.17
PTPMT1-205ENST00000534775 FAM229AH3BQW9 127 aa13.97□□□□□ -0.17
PTPMT1-205ENST00000534775 IGKV4-1P06312 121 aa13.97□□□□□ -0.17
PTPMT1-205ENST00000534775 LINC00472Q9H8W2 130 aa13.97□□□□□ -0.17
PTPMT1-205ENST00000534775 DSCR10P59022 87 aa13.95□□□□□ -0.18
PTPMT1-205ENST00000534775 Q8N9L7 120 aa13.95□□□□□ -0.18
PTPMT1-205ENST00000534775 ANAPC13Q9BS18 74 aa13.95□□□□□ -0.18
PTPMT1-205ENST00000534775 J3KT08 172 aa13.93□□□□□ -0.18
PTPMT1-205ENST00000534775 EPPK1P58107 5090 aaKnown RBP13.93□□□□□ -0.18
PTPMT1-205ENST00000534775 DEFB116Q30KQ4 102 aa13.93□□□□□ -0.18
PTPMT1-205ENST00000534775 ATOX1O00244 68 aa13.92□□□□□ -0.18
PTPMT1-205ENST00000534775 TYMSOSQ8TAI1 123 aa13.9□□□□□ -0.18
PTPMT1-205ENST00000534775 K7EQZ3 153 aa13.88□□□□□ -0.19
PTPMT1-205ENST00000534775 FAT1Q14517 4588 aa13.87□□□□□ -0.19
PTPMT1-205ENST00000534775 Q96NJ1 140 aa13.86□□□□□ -0.19
PTPMT1-205ENST00000534775 A8MWP4 228 aa13.84□□□□□ -0.19
PTPMT1-205ENST00000534775 HSPG2P98160 4391 aa13.83□□□□□ -0.2
PTPMT1-205ENST00000534775 ASB16-AS1Q495Z4 193 aa13.82□□□□□ -0.2
PTPMT1-205ENST00000534775 C4orf48Q5BLP8 95 aa13.82□□□□□ -0.2
PTPMT1-205ENST00000534775 Q5VSD8 79 aa13.82□□□□□ -0.2
PTPMT1-205ENST00000534775 PRR26Q8N8Z3 221 aa13.82□□□□□ -0.2
PTPMT1-205ENST00000534775 Q5XG85 94 aa13.81□□□□□ -0.2
PTPMT1-205ENST00000534775 RYR1P21817 5038 aa13.81□□□□□ -0.2
PTPMT1-205ENST00000534775 NDUFB1O75438 58 aa13.8□□□□□ -0.2
PTPMT1-205ENST00000534775 PRR15Q8IV56 129 aa13.79□□□□□ -0.2
PTPMT1-205ENST00000534775 LIMD2Q9BT23 127 aa13.79□□□□□ -0.2
PTPMT1-205ENST00000534775 SMIM20Q8N5G0 67 aa13.76□□□□□ -0.21
PTPMT1-205ENST00000534775 SPINK1P00995 79 aa13.75□□□□□ -0.21
PTPMT1-205ENST00000534775 HCG22E2RYF7 251 aa13.75□□□□□ -0.21
PTPMT1-205ENST00000534775 SPAG11AQ6PDA7 123 aa13.74□□□□□ -0.21
PTPMT1-205ENST00000534775 LINC00304Q8N9R0 145 aa13.74□□□□□ -0.21
PTPMT1-205ENST00000534775 KIAA1109Q2LD37 5005 aa13.73□□□□□ -0.21
PTPMT1-205ENST00000534775 SERP2Q8N6R1 65 aa13.72□□□□□ -0.21
PTPMT1-205ENST00000534775 RPS29P62273 56 aaKnown RBP13.69□□□□□ -0.22
PTPMT1-205ENST00000534775 A0A1B0GVX0 72 aa13.68□□□□□ -0.22
PTPMT1-205ENST00000534775 COX7CP15954 63 aa13.68□□□□□ -0.22
PTPMT1-205ENST00000534775 TRAV7A0A075B6U4 112 aa13.66□□□□□ -0.22
PTPMT1-205ENST00000534775 Q8N1X5 172 aa13.66□□□□□ -0.22
PTPMT1-205ENST00000534775 UQCRQO14949 82 aa13.65□□□□□ -0.22
PTPMT1-205ENST00000534775 C1orf195Q5TG92 126 aa13.64□□□□□ -0.23
PTPMT1-205ENST00000534775 KRTAP17-1Q9BYP8 105 aa13.64□□□□□ -0.23
PTPMT1-205ENST00000534775 CASC2Q6XLA1 102 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms