RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 HRCT1Q6UXD1 115 aa8□□□□□ -1.13
VPS11-205ENST00000534551 CLEC2BQ92478 149 aa7.99□□□□□ -1.13
VPS11-205ENST00000534551 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.97□□□□□ -1.13
VPS11-205ENST00000534551 SPINK1P00995 79 aa7.96□□□□□ -1.14
VPS11-205ENST00000534551 PSMB2P49721 201 aa7.96□□□□□ -1.14
VPS11-205ENST00000534551 TSTD3H0UI37 97 aa7.95□□□□□ -1.14
VPS11-205ENST00000534551 H0YGX0 51 aa7.95□□□□□ -1.14
VPS11-205ENST00000534551 NAA38Q9BRA0 125 aaKnown RBP7.94□□□□□ -1.14
VPS11-205ENST00000534551 M0R143 59 aa7.93□□□□□ -1.14
VPS11-205ENST00000534551 F8WEM9 126 aa7.92□□□□□ -1.14
VPS11-205ENST00000534551 H3BUT2 72 aa7.92□□□□□ -1.14
VPS11-205ENST00000534551 IGLV7-46A0A075B6I9 117 aa7.91□□□□□ -1.14
VPS11-205ENST00000534551 RPS29P62273 56 aaKnown RBP7.91□□□□□ -1.14
VPS11-205ENST00000534551 BATFQ16520 125 aa7.9□□□□□ -1.14
VPS11-205ENST00000534551 IGFL1Q6UW32 110 aa7.89□□□□□ -1.15
VPS11-205ENST00000534551 A0A1B0GX51 115 aa7.88□□□□□ -1.15
VPS11-205ENST00000534551 PPDPFLQ8WWR9 84 aa7.88□□□□□ -1.15
VPS11-205ENST00000534551 SNHG12Q9BXW3 62 aa7.88□□□□□ -1.15
VPS11-205ENST00000534551 IGLV8-61A0A075B6I0 122 aa7.87□□□□□ -1.15
VPS11-205ENST00000534551 A0A1B0GV72 72 aa7.87□□□□□ -1.15
VPS11-205ENST00000534551 COX6CP09669 75 aa7.86□□□□□ -1.15
VPS11-205ENST00000534551 CD164Q04900 197 aa7.86□□□□□ -1.15
VPS11-205ENST00000534551 OCIAD2Q56VL3 154 aa7.86□□□□□ -1.15
VPS11-205ENST00000534551 LIMD2Q9BT23 127 aa7.86□□□□□ -1.15
VPS11-205ENST00000534551 SNCGO76070 127 aa7.85□□□□□ -1.15
VPS11-205ENST00000534551 DNAL4O96015 105 aa7.85□□□□□ -1.15
VPS11-205ENST00000534551 SCGB1C2P0DMR2 95 aa7.85□□□□□ -1.15
VPS11-205ENST00000534551 FABP2P12104 132 aa7.85□□□□□ -1.15
VPS11-205ENST00000534551 NDUFV3P56181 108 aaKnown RBP7.85□□□□□ -1.15
VPS11-205ENST00000534551 FP248Q71RG6 208 aaPredicted RBP7.85□□□□□ -1.15
VPS11-205ENST00000534551 RNF213Q63HN8 5207 aa7.84□□□□□ -1.15
VPS11-205ENST00000534551 LST1O00453 97 aa7.84□□□□□ -1.15
VPS11-205ENST00000534551 TPRXLQ17RH7 258 aa7.84□□□□□ -1.15
VPS11-205ENST00000534551 Q6JHZ5 121 aa7.83□□□□□ -1.16
VPS11-205ENST00000534551 ORMDL1Q9P0S3 153 aa7.83□□□□□ -1.16
VPS11-205ENST00000534551 KRTAP13-3Q3SY46 172 aa7.82□□□□□ -1.16
VPS11-205ENST00000534551 MUC17Q685J3 4493 aa7.82□□□□□ -1.16
VPS11-205ENST00000534551 TCL1BO95988 128 aa7.81□□□□□ -1.16
VPS11-205ENST00000534551 TRBV7-7A0A0K0K1E9 115 aa7.8□□□□□ -1.16
VPS11-205ENST00000534551 TRACP01848 142 aa7.8□□□□□ -1.16
VPS11-205ENST00000534551 CDIP1Q9H305 208 aa7.8□□□□□ -1.16
VPS11-205ENST00000534551 H3BMG7 143 aa7.79□□□□□ -1.16
VPS11-205ENST00000534551 C1orf195Q5TG92 126 aa7.78□□□□□ -1.16
VPS11-205ENST00000534551 Q5XG85 94 aa7.78□□□□□ -1.16
VPS11-205ENST00000534551 TAX1BP3O14907 124 aa7.77□□□□□ -1.17
VPS11-205ENST00000534551 A0A1W2PNM2 257 aa7.75□□□□□ -1.17
VPS11-205ENST00000534551 C9orf92A6NGG3 77 aa7.74□□□□□ -1.17
VPS11-205ENST00000534551 TMEM256-PLSCR3K7ERE1 68 aa7.74□□□□□ -1.17
VPS11-205ENST00000534551 GHRHP01286 108 aa7.74□□□□□ -1.17
VPS11-205ENST00000534551 ATXN8Q156A1 80 aa7.74□□□□□ -1.17
VPS11-205ENST00000534551 C9orf118A6NHY6 69 aa7.73□□□□□ -1.17
VPS11-205ENST00000534551 UBE2V1Q13404 147 aa7.72□□□□□ -1.17
VPS11-205ENST00000534551 A0A087WSZ3 146 aa7.71□□□□□ -1.18
VPS11-205ENST00000534551 BAALC-AS2P0C853 105 aa7.71□□□□□ -1.18
VPS11-205ENST00000534551 Q6Q795 121 aa7.71□□□□□ -1.18
VPS11-205ENST00000534551 TEN1Q86WV5 123 aa7.71□□□□□ -1.18
VPS11-205ENST00000534551 MTURNQ8N3F0 131 aa7.71□□□□□ -1.18
VPS11-205ENST00000534551 ANKRD29Q8N6D5 301 aa7.71□□□□□ -1.18
VPS11-205ENST00000534551 PCP4L1A6NKN8 68 aa7.7□□□□□ -1.18
VPS11-205ENST00000534551 H3BQ85 93 aa7.7□□□□□ -1.18
VPS11-205ENST00000534551 XP32Q5T750 250 aa7.7□□□□□ -1.18
VPS11-205ENST00000534551 A0A1W2PPM0 123 aa7.69□□□□□ -1.18
VPS11-205ENST00000534551 ASB16-AS1Q495Z4 193 aa7.69□□□□□ -1.18
VPS11-205ENST00000534551 LYRM7Q5U5X0 104 aa7.69□□□□□ -1.18
VPS11-205ENST00000534551 C9JAW5 83 aa7.68□□□□□ -1.18
VPS11-205ENST00000534551 TRBV7-4A0A0J9YYF1 115 aa7.67□□□□□ -1.18
VPS11-205ENST00000534551 CCKP06307 115 aa7.66□□□□□ -1.18
VPS11-205ENST00000534551 Q96NJ1 140 aa7.66□□□□□ -1.18
VPS11-205ENST00000534551 VPS25Q9BRG1 176 aa7.66□□□□□ -1.18
VPS11-205ENST00000534551 MUC2Q02817 5179 aa7.65□□□□□ -1.18
VPS11-205ENST00000534551 TRBV20-1A0A075B6N2 111 aa7.64□□□□□ -1.19
VPS11-205ENST00000534551 RBM3P98179 157 aaKnown RBP7.64□□□□□ -1.19
VPS11-205ENST00000534551 SS18L2Q9UHA2 77 aa7.64□□□□□ -1.19
VPS11-205ENST00000534551 COL5A1-AS1Q5SY13 56 aa7.62□□□□□ -1.19
VPS11-205ENST00000534551 DSCR8Q96T75 97 aa7.62□□□□□ -1.19
VPS11-205ENST00000534551 SPCS1Q9Y6A9 102 aa7.62□□□□□ -1.19
VPS11-205ENST00000534551 KRTAP4-1Q9BYQ7 146 aa7.6□□□□□ -1.19
VPS11-205ENST00000534551 C14orf132Q9NPU4 83 aa7.6□□□□□ -1.19
VPS11-205ENST00000534551 SIGMAR1Q99720 223 aa7.59□□□□□ -1.19
VPS11-205ENST00000534551 DEFB116Q30KQ4 102 aa7.58□□□□□ -1.2
VPS11-205ENST00000534551 Q6ZQT0 140 aa7.58□□□□□ -1.2
VPS11-205ENST00000534551 OBSCN-AS1Q96MR7 158 aa7.57□□□□□ -1.2
VPS11-205ENST00000534551 JMJD7-PLA2G4BH0Y9G9 81 aa7.56□□□□□ -1.2
VPS11-205ENST00000534551 H3BT86 120 aa7.56□□□□□ -1.2
VPS11-205ENST00000534551 SEC61BP60468 96 aaKnown RBP7.56□□□□□ -1.2
VPS11-205ENST00000534551 LOC110117498A0A087WWA1 95 aa7.55□□□□□ -1.2
VPS11-205ENST00000534551 SMCPP49901 116 aaPredicted RBP7.55□□□□□ -1.2
VPS11-205ENST00000534551 PCOTHQ58A44 107 aa7.55□□□□□ -1.2
VPS11-205ENST00000534551 K7EP34 96 aa7.54□□□□□ -1.2
VPS11-205ENST00000534551 IGKV4-1P06312 121 aa7.54□□□□□ -1.2
VPS11-205ENST00000534551 LINC00472Q9H8W2 130 aa7.54□□□□□ -1.2
VPS11-205ENST00000534551 DSCR10P59022 87 aa7.53□□□□□ -1.2
VPS11-205ENST00000534551 RPL37P61927 97 aaKnown RBP7.53□□□□□ -1.2
VPS11-205ENST00000534551 PRO0461Q9UI25 63 aa7.51□□□□□ -1.21
VPS11-205ENST00000534551 FAT4Q6V0I7 4981 aa7.51□□□□□ -1.21
VPS11-205ENST00000534551 NOTCH2NLQ7Z3S9 236 aa7.49□□□□□ -1.21
VPS11-205ENST00000534551 PDE6GP18545 87 aa7.46□□□□□ -1.22
VPS11-205ENST00000534551 IGHV6-1A0A0B4J1U7 121 aa7.45□□□□□ -1.22
VPS11-205ENST00000534551 KRTAP16-1A8MUX0 517 aa7.44□□□□□ -1.22
VPS11-205ENST00000534551 Q75L30 129 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms