RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 GHRHP01286 108 aa11.34□□□□□ -0.59
SMPD1-205ENST00000531303 SMIM29Q86T20 159 aa11.33□□□□□ -0.6
SMPD1-205ENST00000531303 IGLV9-49A0A0B4J1Y8 123 aa11.32□□□□□ -0.6
SMPD1-205ENST00000531303 A0A1B0GV72 72 aa11.32□□□□□ -0.6
SMPD1-205ENST00000531303 TMEM256-PLSCR3K7ERE1 68 aa11.32□□□□□ -0.6
SMPD1-205ENST00000531303 LAMTOR3Q9UHA4 124 aa11.32□□□□□ -0.6
SMPD1-205ENST00000531303 PPDPFLQ8WWR9 84 aa11.32□□□□□ -0.6
SMPD1-205ENST00000531303 A0A087X002 238 aa11.31□□□□□ -0.6
SMPD1-205ENST00000531303 H3BQ85 93 aa11.31□□□□□ -0.6
SMPD1-205ENST00000531303 CRYGAP11844 174 aa11.3□□□□□ -0.6
SMPD1-205ENST00000531303 FAM229BQ4G0N7 80 aa11.3□□□□□ -0.6
SMPD1-205ENST00000531303 PRR26Q8N8Z3 221 aa11.3□□□□□ -0.6
SMPD1-205ENST00000531303 NDUFV3P56181 108 aaKnown RBP11.29□□□□□ -0.6
SMPD1-205ENST00000531303 C9orf153Q5TBE3 101 aa11.29□□□□□ -0.6
SMPD1-205ENST00000531303 F8WEM9 126 aa11.28□□□□□ -0.6
SMPD1-205ENST00000531303 UBE2V1Q13404 147 aa11.27□□□□□ -0.6
SMPD1-205ENST00000531303 ANKRD29Q8N6D5 301 aa11.27□□□□□ -0.6
SMPD1-205ENST00000531303 PRO0461Q9UI25 63 aa11.27□□□□□ -0.6
SMPD1-205ENST00000531303 H3BT86 120 aa11.26□□□□□ -0.61
SMPD1-205ENST00000531303 SMCPP49901 116 aaPredicted RBP11.26□□□□□ -0.61
SMPD1-205ENST00000531303 MOBPQ13875 183 aa11.26□□□□□ -0.61
SMPD1-205ENST00000531303 KRTAP13-2Q52LG2 175 aa11.26□□□□□ -0.61
SMPD1-205ENST00000531303 ABCA13Q86UQ4 5058 aa11.26□□□□□ -0.61
SMPD1-205ENST00000531303 LINC01600Q96MT4 127 aa11.23□□□□□ -0.61
SMPD1-205ENST00000531303 LRP1Q07954 4544 aaKnown RBP11.23□□□□□ -0.61
SMPD1-205ENST00000531303 TYMSOSQ8TAI1 123 aa11.22□□□□□ -0.61
SMPD1-205ENST00000531303 A0A0G2JQZ4 141 aa11.21□□□□□ -0.61
SMPD1-205ENST00000531303 F8W1H4 67 aa11.21□□□□□ -0.61
SMPD1-205ENST00000531303 Q8NBF4 154 aa11.2□□□□□ -0.62
SMPD1-205ENST00000531303 FAT3Q8TDW7 4589 aa11.18□□□□□ -0.62
SMPD1-205ENST00000531303 RBM3P98179 157 aaKnown RBP11.17□□□□□ -0.62
SMPD1-205ENST00000531303 MYCBP2O75592 4640 aa11.16□□□□□ -0.62
SMPD1-205ENST00000531303 IGLV8-61A0A075B6I0 122 aa11.15□□□□□ -0.62
SMPD1-205ENST00000531303 SSBP3-AS1Q7Z2R9 100 aa11.15□□□□□ -0.62
SMPD1-205ENST00000531303 JMJD7-PLA2G4BH0Y9G9 81 aa11.14□□□□□ -0.63
SMPD1-205ENST00000531303 OXTP01178 125 aa11.14□□□□□ -0.63
SMPD1-205ENST00000531303 IGFL1Q6UW32 110 aa11.14□□□□□ -0.63
SMPD1-205ENST00000531303 KRTAP10-8P60410 259 aa11.13□□□□□ -0.63
SMPD1-205ENST00000531303 HRCT1Q6UXD1 115 aa11.13□□□□□ -0.63
SMPD1-205ENST00000531303 C14orf132Q9NPU4 83 aa11.13□□□□□ -0.63
SMPD1-205ENST00000531303 ETDBQ3ZM63 59 aa11.12□□□□□ -0.63
SMPD1-205ENST00000531303 Q6JHZ5 121 aa11.12□□□□□ -0.63
SMPD1-205ENST00000531303 DSCR8Q96T75 97 aa11.12□□□□□ -0.63
SMPD1-205ENST00000531303 OBSCN-AS1Q96MR7 158 aa11.12□□□□□ -0.63
SMPD1-205ENST00000531303 MT1HL1P0DM35 61 aa11.1□□□□□ -0.63
SMPD1-205ENST00000531303 KRTAP29-1A8MX34 341 aaPredicted RBP11.09□□□□□ -0.63
SMPD1-205ENST00000531303 TEN1Q86WV5 123 aa11.09□□□□□ -0.63
SMPD1-205ENST00000531303 TRBV7-4A0A0J9YYF1 115 aa11.08□□□□□ -0.64
SMPD1-205ENST00000531303 LINC00304Q8N9R0 145 aa11.08□□□□□ -0.64
SMPD1-205ENST00000531303 VPS25Q9BRG1 176 aa11.08□□□□□ -0.64
SMPD1-205ENST00000531303 C4orf48Q5BLP8 95 aa11.07□□□□□ -0.64
SMPD1-205ENST00000531303 CCKP06307 115 aa11.06□□□□□ -0.64
SMPD1-205ENST00000531303 A0A1W2PNM2 257 aa11.05□□□□□ -0.64
SMPD1-205ENST00000531303 J3QL48 77 aa11.05□□□□□ -0.64
SMPD1-205ENST00000531303 TNXBP22105 4242 aa11.04□□□□□ -0.64
SMPD1-205ENST00000531303 LOC110117498A0A087WWA1 95 aa11.04□□□□□ -0.64
SMPD1-205ENST00000531303 DMBT1Q9UGM3 2413 aaPredicted RBP11.03□□□□□ -0.64
SMPD1-205ENST00000531303 Q6ZQT0 140 aa11.03□□□□□ -0.64
SMPD1-205ENST00000531303 PCLOQ9Y6V0 5065 aa11.01□□□□□ -0.65
SMPD1-205ENST00000531303 PDE6GP18545 87 aa11□□□□□ -0.65
SMPD1-205ENST00000531303 SPAG11AQ6PDA7 123 aa11□□□□□ -0.65
SMPD1-205ENST00000531303 CD164Q04900 197 aa10.99□□□□□ -0.65
SMPD1-205ENST00000531303 TRBV7-7A0A0K0K1E9 115 aa10.98□□□□□ -0.65
SMPD1-205ENST00000531303 SPINK1P00995 79 aa10.96□□□□□ -0.65
SMPD1-205ENST00000531303 Q6Q795 121 aa10.96□□□□□ -0.65
SMPD1-205ENST00000531303 A0A087WSZ3 146 aa10.95□□□□□ -0.66
SMPD1-205ENST00000531303 LIMD2Q9BT23 127 aa10.89□□□□□ -0.67
SMPD1-205ENST00000531303 C21orf62-AS1Q17RA5 79 aa10.88□□□□□ -0.67
SMPD1-205ENST00000531303 RPS29P62273 56 aaKnown RBP10.87□□□□□ -0.67
SMPD1-205ENST00000531303 RETNLBQ9BQ08 111 aa10.85□□□□□ -0.67
SMPD1-205ENST00000531303 SS18L2Q9UHA2 77 aa10.85□□□□□ -0.67
SMPD1-205ENST00000531303 A0A1B0GW54 56 aa10.83□□□□□ -0.68
SMPD1-205ENST00000531303 Q5XG85 94 aa10.82□□□□□ -0.68
SMPD1-205ENST00000531303 LINC00846Q9NV44 126 aa10.81□□□□□ -0.68
SMPD1-205ENST00000531303 NREPQ16612 68 aa10.8□□□□□ -0.68
SMPD1-205ENST00000531303 DEFB116Q30KQ4 102 aa10.79□□□□□ -0.68
SMPD1-205ENST00000531303 C1orf195Q5TG92 126 aa10.79□□□□□ -0.68
SMPD1-205ENST00000531303 J3QR89 54 aa10.78□□□□□ -0.68
SMPD1-205ENST00000531303 ASB16-AS1Q495Z4 193 aa10.77□□□□□ -0.69
SMPD1-205ENST00000531303 Q96NJ1 140 aa10.75□□□□□ -0.69
SMPD1-205ENST00000531303 ACYP1P07311 99 aa10.74□□□□□ -0.69
SMPD1-205ENST00000531303 Q6ZVQ6 151 aa10.74□□□□□ -0.69
SMPD1-205ENST00000531303 LINC00472Q9H8W2 130 aa10.74□□□□□ -0.69
SMPD1-205ENST00000531303 FAM240AA0A1B0GVK7 77 aa10.74□□□□□ -0.69
SMPD1-205ENST00000531303 UBL5Q9BZL1 73 aa10.74□□□□□ -0.69
SMPD1-205ENST00000531303 IGKV4-1P06312 121 aa10.72□□□□□ -0.69
SMPD1-205ENST00000531303 PRR4Q16378 134 aa10.72□□□□□ -0.69
SMPD1-205ENST00000531303 SIGMAR1Q99720 223 aa10.7□□□□□ -0.7
SMPD1-205ENST00000531303 K7ERU9 68 aa10.69□□□□□ -0.7
SMPD1-205ENST00000531303 BPY2O14599 106 aa10.66□□□□□ -0.7
SMPD1-205ENST00000531303 IGLV7-46A0A075B6I9 117 aa10.65□□□□□ -0.7
SMPD1-205ENST00000531303 HERC1Q15751 4861 aa10.65□□□□□ -0.7
SMPD1-205ENST00000531303 FP248Q71RG6 208 aaPredicted RBP10.64□□□□□ -0.71
SMPD1-205ENST00000531303 J3KT08 172 aa10.63□□□□□ -0.71
SMPD1-205ENST00000531303 IGKV3D-7A0A0C4DH55 119 aa10.59□□□□□ -0.71
SMPD1-205ENST00000531303 DSCR10P59022 87 aa10.59□□□□□ -0.71
SMPD1-205ENST00000531303 CDIP1Q9H305 208 aa10.58□□□□□ -0.72
SMPD1-205ENST00000531303 IGHV6-1A0A0B4J1U7 121 aa10.57□□□□□ -0.72
SMPD1-205ENST00000531303 NDUFB1O75438 58 aa10.57□□□□□ -0.72
SMPD1-205ENST00000531303 C9orf92A6NGG3 77 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms