RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 DMBT1Q9UGM3 2413 aaPredicted RBP9.94□□□□□ -0.82
SF3B2-211ENST00000531041 LST1O00453 97 aa9.93□□□□□ -0.82
SF3B2-211ENST00000531041 COL5A1-AS1Q5SY13 56 aa9.93□□□□□ -0.82
SF3B2-211ENST00000531041 SMIM29Q86T20 159 aa9.93□□□□□ -0.82
SF3B2-211ENST00000531041 TNXBP22105 4242 aa9.93□□□□□ -0.82
SF3B2-211ENST00000531041 IGLV9-49A0A0B4J1Y8 123 aa9.92□□□□□ -0.82
SF3B2-211ENST00000531041 DNAL4O96015 105 aa9.92□□□□□ -0.82
SF3B2-211ENST00000531041 TRACP01848 142 aa9.92□□□□□ -0.82
SF3B2-211ENST00000531041 LYRM7Q5U5X0 104 aa9.92□□□□□ -0.82
SF3B2-211ENST00000531041 GHRHP01286 108 aa9.9□□□□□ -0.82
SF3B2-211ENST00000531041 MOBPQ13875 183 aa9.9□□□□□ -0.82
SF3B2-211ENST00000531041 SSBP3-AS1Q7Z2R9 100 aa9.9□□□□□ -0.82
SF3B2-211ENST00000531041 TCL1BO95988 128 aa9.89□□□□□ -0.83
SF3B2-211ENST00000531041 Q8NBF4 154 aa9.89□□□□□ -0.83
SF3B2-211ENST00000531041 A0A1W2PPM0 123 aa9.88□□□□□ -0.83
SF3B2-211ENST00000531041 ATXN8Q156A1 80 aa9.88□□□□□ -0.83
SF3B2-211ENST00000531041 C9orf153Q5TBE3 101 aa9.88□□□□□ -0.83
SF3B2-211ENST00000531041 ORMDL1Q9P0S3 153 aa9.88□□□□□ -0.83
SF3B2-211ENST00000531041 TRBV20-1A0A075B6N2 111 aa9.87□□□□□ -0.83
SF3B2-211ENST00000531041 H3BQ85 93 aa9.87□□□□□ -0.83
SF3B2-211ENST00000531041 LINC00304Q8N9R0 145 aa9.86□□□□□ -0.83
SF3B2-211ENST00000531041 F8WEM9 126 aa9.84□□□□□ -0.83
SF3B2-211ENST00000531041 FABP2P12104 132 aa9.84□□□□□ -0.83
SF3B2-211ENST00000531041 TMEM256-PLSCR3K7ERE1 68 aa9.83□□□□□ -0.84
SF3B2-211ENST00000531041 IGLV8-61A0A075B6I0 122 aa9.82□□□□□ -0.84
SF3B2-211ENST00000531041 NDUFV3P56181 108 aaKnown RBP9.82□□□□□ -0.84
SF3B2-211ENST00000531041 SPAG11AQ6PDA7 123 aa9.82□□□□□ -0.84
SF3B2-211ENST00000531041 C4orf48Q5BLP8 95 aa9.8□□□□□ -0.84
SF3B2-211ENST00000531041 BAALC-AS2P0C853 105 aa9.79□□□□□ -0.84
SF3B2-211ENST00000531041 UBE2V1Q13404 147 aa9.79□□□□□ -0.84
SF3B2-211ENST00000531041 SPINK1P00995 79 aa9.78□□□□□ -0.84
SF3B2-211ENST00000531041 Q6JHZ5 121 aa9.78□□□□□ -0.84
SF3B2-211ENST00000531041 SPCS1Q9Y6A9 102 aa9.77□□□□□ -0.85
SF3B2-211ENST00000531041 C9JAW5 83 aa9.75□□□□□ -0.85
SF3B2-211ENST00000531041 H3BMG7 143 aa9.75□□□□□ -0.85
SF3B2-211ENST00000531041 CD164Q04900 197 aa9.75□□□□□ -0.85
SF3B2-211ENST00000531041 IGFL1Q6UW32 110 aa9.74□□□□□ -0.85
SF3B2-211ENST00000531041 A0A0G2JQZ4 141 aa9.73□□□□□ -0.85
SF3B2-211ENST00000531041 RPS29P62273 56 aaKnown RBP9.73□□□□□ -0.85
SF3B2-211ENST00000531041 ANKRD29Q8N6D5 301 aa9.73□□□□□ -0.85
SF3B2-211ENST00000531041 K7EP34 96 aa9.7□□□□□ -0.86
SF3B2-211ENST00000531041 HRCT1Q6UXD1 115 aa9.7□□□□□ -0.86
SF3B2-211ENST00000531041 H3BT86 120 aa9.69□□□□□ -0.86
SF3B2-211ENST00000531041 HERC1Q15751 4861 aa9.67□□□□□ -0.86
SF3B2-211ENST00000531041 A0A1B0GV72 72 aa9.66□□□□□ -0.86
SF3B2-211ENST00000531041 RBM3P98179 157 aaKnown RBP9.66□□□□□ -0.86
SF3B2-211ENST00000531041 GTF2H5Q6ZYL4 71 aa9.66□□□□□ -0.86
SF3B2-211ENST00000531041 MTURNQ8N3F0 131 aa9.66□□□□□ -0.86
SF3B2-211ENST00000531041 LIMD2Q9BT23 127 aa9.66□□□□□ -0.86
SF3B2-211ENST00000531041 JMJD7-PLA2G4BH0Y9G9 81 aa9.65□□□□□ -0.86
SF3B2-211ENST00000531041 Q6Q795 121 aa9.65□□□□□ -0.86
SF3B2-211ENST00000531041 TRBV7-4A0A0J9YYF1 115 aa9.65□□□□□ -0.87
SF3B2-211ENST00000531041 Q5XG85 94 aa9.65□□□□□ -0.87
SF3B2-211ENST00000531041 TEN1Q86WV5 123 aa9.65□□□□□ -0.87
SF3B2-211ENST00000531041 TRBV7-7A0A0K0K1E9 115 aa9.64□□□□□ -0.87
SF3B2-211ENST00000531041 DSCR8Q96T75 97 aa9.63□□□□□ -0.87
SF3B2-211ENST00000531041 OBSCN-AS1Q96MR7 158 aa9.62□□□□□ -0.87
SF3B2-211ENST00000531041 A0A1W2PNM2 257 aa9.61□□□□□ -0.87
SF3B2-211ENST00000531041 RETNLBQ9BQ08 111 aa9.61□□□□□ -0.87
SF3B2-211ENST00000531041 PRO0461Q9UI25 63 aa9.61□□□□□ -0.87
SF3B2-211ENST00000531041 SMCPP49901 116 aaPredicted RBP9.6□□□□□ -0.87
SF3B2-211ENST00000531041 CCKP06307 115 aa9.58□□□□□ -0.88
SF3B2-211ENST00000531041 LOC110117498A0A087WWA1 95 aa9.56□□□□□ -0.88
SF3B2-211ENST00000531041 PDE6GP18545 87 aa9.56□□□□□ -0.88
SF3B2-211ENST00000531041 PRR4Q16378 134 aa9.56□□□□□ -0.88
SF3B2-211ENST00000531041 ASB16-AS1Q495Z4 193 aa9.56□□□□□ -0.88
SF3B2-211ENST00000531041 F8W1H4 67 aa9.56□□□□□ -0.88
SF3B2-211ENST00000531041 FP248Q71RG6 208 aaPredicted RBP9.56□□□□□ -0.88
SF3B2-211ENST00000531041 Q6ZQT0 140 aa9.55□□□□□ -0.88
SF3B2-211ENST00000531041 C14orf132Q9NPU4 83 aa9.55□□□□□ -0.88
SF3B2-211ENST00000531041 A0A087WSZ3 146 aa9.54□□□□□ -0.88
SF3B2-211ENST00000531041 SS18L2Q9UHA2 77 aa9.54□□□□□ -0.88
SF3B2-211ENST00000531041 C1orf195Q5TG92 126 aa9.52□□□□□ -0.89
SF3B2-211ENST00000531041 VPS25Q9BRG1 176 aa9.52□□□□□ -0.89
SF3B2-211ENST00000531041 A0A1B0GV90 55 aa9.51□□□□□ -0.89
SF3B2-211ENST00000531041 C21orf62-AS1Q17RA5 79 aa9.51□□□□□ -0.89
SF3B2-211ENST00000531041 IGLV7-46A0A075B6I9 117 aa9.5□□□□□ -0.89
SF3B2-211ENST00000531041 A0A1B0GW54 56 aa9.49□□□□□ -0.89
SF3B2-211ENST00000531041 TPRXLQ17RH7 258 aa9.45□□□□□ -0.9
SF3B2-211ENST00000531041 ETDBQ3ZM63 59 aa9.44□□□□□ -0.9
SF3B2-211ENST00000531041 HMCN2Q8NDA2 5059 aa9.44□□□□□ -0.9
SF3B2-211ENST00000531041 Q96NJ1 140 aa9.43□□□□□ -0.9
SF3B2-211ENST00000531041 KRTAP13-3Q3SY46 172 aa9.4□□□□□ -0.9
SF3B2-211ENST00000531041 LINC00472Q9H8W2 130 aa9.39□□□□□ -0.91
SF3B2-211ENST00000531041 LPAP08519 4548 aa9.37□□□□□ -0.91
SF3B2-211ENST00000531041 IGKV4-1P06312 121 aa9.34□□□□□ -0.91
SF3B2-211ENST00000531041 CDIP1Q9H305 208 aa9.34□□□□□ -0.91
SF3B2-211ENST00000531041 DEFB116Q30KQ4 102 aa9.33□□□□□ -0.92
SF3B2-211ENST00000531041 NREPQ16612 68 aa9.32□□□□□ -0.92
SF3B2-211ENST00000531041 SIGMAR1Q99720 223 aa9.31□□□□□ -0.92
SF3B2-211ENST00000531041 J3KT08 172 aa9.31□□□□□ -0.92
SF3B2-211ENST00000531041 LRP2P98164 4655 aa9.3□□□□□ -0.92
SF3B2-211ENST00000531041 C9orf92A6NGG3 77 aa9.3□□□□□ -0.92
SF3B2-211ENST00000531041 LINC00846Q9NV44 126 aa9.27□□□□□ -0.93
SF3B2-211ENST00000531041 Q6ZVQ6 151 aa9.26□□□□□ -0.93
SF3B2-211ENST00000531041 XP32Q5T750 250 aa9.25□□□□□ -0.93
SF3B2-211ENST00000531041 UBL5Q9BZL1 73 aa9.23□□□□□ -0.93
SF3B2-211ENST00000531041 A0A1B0GVX0 72 aa9.22□□□□□ -0.93
SF3B2-211ENST00000531041 A8MWP4 228 aa9.21□□□□□ -0.94
SF3B2-211ENST00000531041 NDUFB1O75438 58 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms