RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 C14orf177Q52M58 125 aa4.07□□□□□ -1.76
ATPAF1-209ENST00000529214 RNASE13Q5GAN3 156 aaKnown RBP4.07□□□□□ -1.76
ATPAF1-209ENST00000529214 C2orf66Q6UXQ4 117 aa4.07□□□□□ -1.76
ATPAF1-209ENST00000529214 Q6ZRP5 223 aa4.07□□□□□ -1.76
ATPAF1-209ENST00000529214 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.06□□□□□ -1.76
ATPAF1-209ENST00000529214 TMEM223A0PJW6 202 aa4.06□□□□□ -1.76
ATPAF1-209ENST00000529214 IGIPA6NJ69 53 aa4.06□□□□□ -1.76
ATPAF1-209ENST00000529214 KRTAP10-1P60331 282 aa4.06□□□□□ -1.76
ATPAF1-209ENST00000529214 TMEM141Q96I45 108 aa4.06□□□□□ -1.76
ATPAF1-209ENST00000529214 OCR1Q9BZK8 76 aa4.06□□□□□ -1.76
ATPAF1-209ENST00000529214 NDUFA12Q9UI09 145 aa4.06□□□□□ -1.76
ATPAF1-209ENST00000529214 KIAA1109Q2LD37 5005 aa4.06□□□□□ -1.76
ATPAF1-209ENST00000529214 DNAH8Q96JB1 4490 aa4.06□□□□□ -1.76
ATPAF1-209ENST00000529214 IGLV4-3A0A075B6K6 122 aa4.05□□□□□ -1.76
ATPAF1-209ENST00000529214 SMIM1B2RUZ4 78 aa4.05□□□□□ -1.76
ATPAF1-209ENST00000529214 CFC1BP0CG36 223 aa4.05□□□□□ -1.76
ATPAF1-209ENST00000529214 CFC1P0CG37 223 aa4.05□□□□□ -1.76
ATPAF1-209ENST00000529214 ATP5EP2Q5VTU8 51 aa4.05□□□□□ -1.76
ATPAF1-209ENST00000529214 SPTSSBQ8NFR3 76 aa4.05□□□□□ -1.76
ATPAF1-209ENST00000529214 AMELXQ99217 191 aa4.05□□□□□ -1.76
ATPAF1-209ENST00000529214 APOBP04114 4563 aaKnown RBP4.05□□□□□ -1.76
ATPAF1-209ENST00000529214 TRBV30A0A0K0K1B3 111 aa4.05□□□□□ -1.76
ATPAF1-209ENST00000529214 LEPROTO15243 131 aa4.05□□□□□ -1.76
ATPAF1-209ENST00000529214 SLPIP03973 132 aa4.05□□□□□ -1.76
ATPAF1-209ENST00000529214 C15orf56Q8N910 161 aa4.05□□□□□ -1.76
ATPAF1-209ENST00000529214 TTTY13Q9BZ97 58 aa4.05□□□□□ -1.76
ATPAF1-209ENST00000529214 RYR1P21817 5038 aa4.04□□□□□ -1.76
ATPAF1-209ENST00000529214 COX6CP09669 75 aa4.04□□□□□ -1.76
ATPAF1-209ENST00000529214 CNBPP62633 177 aaKnown RBP4.04□□□□□ -1.76
ATPAF1-209ENST00000529214 C9orf163Q8N9P6 203 aa4.04□□□□□ -1.76
ATPAF1-209ENST00000529214 SCGB3A1Q96QR1 104 aa4.04□□□□□ -1.76
ATPAF1-209ENST00000529214 HSPG2P98160 4391 aa4.04□□□□□ -1.76
ATPAF1-209ENST00000529214 A0A096LNJ9 63 aa4.03□□□□□ -1.76
ATPAF1-209ENST00000529214 GVQW2A0A096LPI5 108 aaPredicted RBP4.03□□□□□ -1.76
ATPAF1-209ENST00000529214 COX6A2Q02221 97 aa4.03□□□□□ -1.76
ATPAF1-209ENST00000529214 HERC2O95714 4834 aa4.02□□□□□ -1.77
ATPAF1-209ENST00000529214 TRAV22A0A0B4J277 110 aa4.02□□□□□ -1.77
ATPAF1-209ENST00000529214 IGKV3D-7A0A0C4DH55 119 aa4.02□□□□□ -1.77
ATPAF1-209ENST00000529214 HCG22E2RYF7 251 aa4.02□□□□□ -1.77
ATPAF1-209ENST00000529214 Q1RN00 199 aa4.02□□□□□ -1.77
ATPAF1-209ENST00000529214 HIGD2BQ4VC39 106 aa4.02□□□□□ -1.77
ATPAF1-209ENST00000529214 REG3GQ6UW15 175 aa4.02□□□□□ -1.77
ATPAF1-209ENST00000529214 Q6ZSA8 131 aa4.02□□□□□ -1.77
ATPAF1-209ENST00000529214 CYP4F30PQ9H0H9 118 aa4.02□□□□□ -1.77
ATPAF1-209ENST00000529214 SND1-IT1Q9HBX3 110 aa4.02□□□□□ -1.77
ATPAF1-209ENST00000529214 IGHV3-64A0A075B6Q5 118 aa4.01□□□□□ -1.77
ATPAF1-209ENST00000529214 A0A087WVE0 104 aa4.01□□□□□ -1.77
ATPAF1-209ENST00000529214 ZNF815PA8K554 130 aa4.01□□□□□ -1.77
ATPAF1-209ENST00000529214 PLNP26678 52 aa4.01□□□□□ -1.77
ATPAF1-209ENST00000529214 ASB16-AS1Q495Z4 193 aa4.01□□□□□ -1.77
ATPAF1-209ENST00000529214 IGLV4-69A0A075B6H9 119 aa4□□□□□ -1.77
ATPAF1-209ENST00000529214 TRBV10-3A0A0K0K1G6 114 aa4□□□□□ -1.77
ATPAF1-209ENST00000529214 hDV103S1A0JD37 113 aa4□□□□□ -1.77
ATPAF1-209ENST00000529214 ADAMTSL4-AS1Q5T5F5 129 aa4□□□□□ -1.77
ATPAF1-209ENST00000529214 RETNLBQ9BQ08 111 aa3.99□□□□□ -1.77
ATPAF1-209ENST00000529214 TRAV23DV6A0A075B6W5 121 aa3.98□□□□□ -1.77
ATPAF1-209ENST00000529214 A0A1B0GW54 56 aa3.98□□□□□ -1.77
ATPAF1-209ENST00000529214 RPL37AP8A6NKH3 93 aa3.98□□□□□ -1.77
ATPAF1-209ENST00000529214 ERC2-IT1O76042 136 aa3.98□□□□□ -1.77
ATPAF1-209ENST00000529214 DNAL4O96015 105 aa3.98□□□□□ -1.77
ATPAF1-209ENST00000529214 SPAG11BQ08648 103 aa3.98□□□□□ -1.77
ATPAF1-209ENST00000529214 Q8N1X5 172 aa3.98□□□□□ -1.77
ATPAF1-209ENST00000529214 CDKN2A-AS1Q9UH64 79 aa3.98□□□□□ -1.77
ATPAF1-209ENST00000529214 SNURFQ9Y675 71 aa3.98□□□□□ -1.77
ATPAF1-209ENST00000529214 FAT1Q14517 4588 aa3.98□□□□□ -1.77
ATPAF1-209ENST00000529214 A0A087X002 238 aa3.98□□□□□ -1.77
ATPAF1-209ENST00000529214 CHKB-CPT1BH3BT56 60 aa3.98□□□□□ -1.77
ATPAF1-209ENST00000529214 PANO1I0J062 215 aa3.98□□□□□ -1.77
ATPAF1-209ENST00000529214 HAMPP81172 84 aa3.98□□□□□ -1.77
ATPAF1-209ENST00000529214 C9orf116Q5BN46 136 aaPredicted RBP3.98□□□□□ -1.77
ATPAF1-209ENST00000529214 Q5VV11 94 aa3.98□□□□□ -1.77
ATPAF1-209ENST00000529214 CIRBP-AS1Q8TBR5 109 aa3.98□□□□□ -1.77
ATPAF1-209ENST00000529214 CAMK2N2Q96S95 79 aa3.98□□□□□ -1.77
ATPAF1-209ENST00000529214 CDC42SE1Q9NRR8 79 aa3.98□□□□□ -1.77
ATPAF1-209ENST00000529214 SMR3BP02814 79 aaPredicted RBP3.97□□□□□ -1.77
ATPAF1-209ENST00000529214 RPL28P46779 137 aaKnown RBP3.97□□□□□ -1.77
ATPAF1-209ENST00000529214 UNQ6190/PRO20217Q6UXQ8 127 aa3.97□□□□□ -1.77
ATPAF1-209ENST00000529214 TRAV12-1A0A0B4J245 112 aa3.96□□□□□ -1.78
ATPAF1-209ENST00000529214 NDUFA1O15239 70 aa3.96□□□□□ -1.78
ATPAF1-209ENST00000529214 CHTF8P0CG12 524 aa3.96□□□□□ -1.78
ATPAF1-209ENST00000529214 Q8IZM0 81 aa3.96□□□□□ -1.78
ATPAF1-209ENST00000529214 LIMD2Q9BT23 127 aa3.96□□□□□ -1.78
ATPAF1-209ENST00000529214 A0A087WYN8 130 aa3.95□□□□□ -1.78
ATPAF1-209ENST00000529214 A0A096LNI7 61 aa3.95□□□□□ -1.78
ATPAF1-209ENST00000529214 KRTAP16-1A8MUX0 517 aa3.95□□□□□ -1.78
ATPAF1-209ENST00000529214 SPACA4Q8TDM5 124 aa3.95□□□□□ -1.78
ATPAF1-209ENST00000529214 TOMM7Q9P0U1 55 aa3.95□□□□□ -1.78
ATPAF1-209ENST00000529214 C6orf48Q9UBA6 75 aa3.95□□□□□ -1.78
ATPAF1-209ENST00000529214 IGKV2-24A0A0C4DH68 120 aa3.94□□□□□ -1.78
ATPAF1-209ENST00000529214 C11orf86A6NJI1 115 aa3.94□□□□□ -1.78
ATPAF1-209ENST00000529214 A8MU10 97 aa3.94□□□□□ -1.78
ATPAF1-209ENST00000529214 F8VRH5 84 aa3.94□□□□□ -1.78
ATPAF1-209ENST00000529214 H7C2G1 150 aa3.94□□□□□ -1.78
ATPAF1-209ENST00000529214 TLX1NBP0CAT3 122 aa3.94□□□□□ -1.78
ATPAF1-209ENST00000529214 PLAC8Q9NZF1 115 aa3.94□□□□□ -1.78
ATPAF1-209ENST00000529214 TRBV7-4A0A0J9YYF1 115 aa3.93□□□□□ -1.78
ATPAF1-209ENST00000529214 MOBPQ13875 183 aa3.93□□□□□ -1.78
ATPAF1-209ENST00000529214 Q5VSD8 79 aa3.93□□□□□ -1.78
ATPAF1-209ENST00000529214 COX7B2Q8TF08 81 aa3.93□□□□□ -1.78
ATPAF1-209ENST00000529214 VPS13BQ7Z7G8 4022 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms