RNA–Protein interactions for RNA: ENST00000527718.1

PABPC4-222, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-222	ENST00000527718	CCDC179	H3BU77	68 aa		4.02	□□□□□ -1.77
PABPC4-222	ENST00000527718	RTL8C	O15255	209 aa		4.02	□□□□□ -1.77
PABPC4-222	ENST00000527718	SLPI	P03973	132 aa		4.02	□□□□□ -1.77
PABPC4-222	ENST00000527718	CCK	P06307	115 aa		4.02	□□□□□ -1.77
PABPC4-222	ENST00000527718	SPRR1A	P35321	89 aa		4.02	□□□□□ -1.77
PABPC4-222	ENST00000527718	UBE2A	P49459	152 aa		4.02	□□□□□ -1.77
PABPC4-222	ENST00000527718	NDUFV3	P56181	108 aa	Known RBP	4.02	□□□□□ -1.77
PABPC4-222	ENST00000527718		Q6ZRN7	208 aa	Predicted RBP	4.02	□□□□□ -1.77
PABPC4-222	ENST00000527718		Q8N1X5	172 aa		4.02	□□□□□ -1.77
PABPC4-222	ENST00000527718	SDIM1	Q6ZPB5	146 aa		4.01	□□□□□ -1.77
PABPC4-222	ENST00000527718		Q5XG85	94 aa		4	□□□□□ -1.77
PABPC4-222	ENST00000527718	C14orf132	Q9NPU4	83 aa		4	□□□□□ -1.77
PABPC4-222	ENST00000527718	DNAH7	Q8WXX0	4024 aa		4	□□□□□ -1.77
PABPC4-222	ENST00000527718	BCE1	O60756	84 aa		3.99	□□□□□ -1.77
PABPC4-222	ENST00000527718		Q6JHZ5	121 aa		3.99	□□□□□ -1.77
PABPC4-222	ENST00000527718		Q8NDZ9	215 aa		3.99	□□□□□ -1.77
PABPC4-222	ENST00000527718	SPACA4	Q8TDM5	124 aa		3.99	□□□□□ -1.77
PABPC4-222	ENST00000527718	IGLV5-48	A0A075B6I7	105 aa		3.98	□□□□□ -1.77
PABPC4-222	ENST00000527718	RPL37A	P61513	92 aa	Known RBP	3.98	□□□□□ -1.77
PABPC4-222	ENST00000527718	FAM168B	A1KXE4	195 aa		3.97	□□□□□ -1.77
PABPC4-222	ENST00000527718	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	3.97	□□□□□ -1.77
PABPC4-222	ENST00000527718	TMEM258	P61165	79 aa		3.97	□□□□□ -1.77
PABPC4-222	ENST00000527718	DEFB105A	Q8NG35	78 aa		3.97	□□□□□ -1.77
PABPC4-222	ENST00000527718	HIGD2A	Q9BW72	106 aa		3.97	□□□□□ -1.77
PABPC4-222	ENST00000527718	PLAC8	Q9NZF1	115 aa		3.97	□□□□□ -1.77
PABPC4-222	ENST00000527718	CSMD3	Q7Z407	3707 aa		3.97	□□□□□ -1.77
PABPC4-222	ENST00000527718	TRBV7-4	A0A0J9YYF1	115 aa		3.96	□□□□□ -1.78
PABPC4-222	ENST00000527718		A0A1W2PNN7	141 aa		3.96	□□□□□ -1.78
PABPC4-222	ENST00000527718		Q6ZQT0	140 aa		3.96	□□□□□ -1.78
PABPC4-222	ENST00000527718		Q75L30	129 aa		3.96	□□□□□ -1.78
PABPC4-222	ENST00000527718	DYNC2H1	Q8NCM8	4307 aa	Known RBP	3.95	□□□□□ -1.78
PABPC4-222	ENST00000527718	TRBV7-7	A0A0K0K1E9	115 aa		3.95	□□□□□ -1.78
PABPC4-222	ENST00000527718	EPM2A	B3EWF7	344 aa		3.95	□□□□□ -1.78
PABPC4-222	ENST00000527718	CXCL6	P80162	114 aa		3.95	□□□□□ -1.78
PABPC4-222	ENST00000527718	NREP	Q16612	68 aa		3.95	□□□□□ -1.78
PABPC4-222	ENST00000527718	LCE6A	A0A183	80 aa		3.94	□□□□□ -1.78
PABPC4-222	ENST00000527718	C1orf137	Q5JT78	98 aa		3.94	□□□□□ -1.78
PABPC4-222	ENST00000527718	PHF5A	Q7RTV0	110 aa	Known RBP	3.94	□□□□□ -1.78
PABPC4-222	ENST00000527718	SMCR5	Q8TEV8	140 aa		3.94	□□□□□ -1.78
PABPC4-222	ENST00000527718	DNAH1	Q9P2D7	4330 aa		3.93	□□□□□ -1.78
PABPC4-222	ENST00000527718	FAM236A	A0A1B0GUQ0	79 aa		3.93	□□□□□ -1.78
PABPC4-222	ENST00000527718	FAM236B	A0A1B0GV22	79 aa		3.93	□□□□□ -1.78
PABPC4-222	ENST00000527718	UQCRQ	O14949	82 aa		3.93	□□□□□ -1.78
PABPC4-222	ENST00000527718	MT-ATP8	P03928	68 aa		3.93	□□□□□ -1.78
PABPC4-222	ENST00000527718	CHTF8	P0CG12	524 aa		3.93	□□□□□ -1.78
PABPC4-222	ENST00000527718	SPRR1B	P22528	89 aa		3.93	□□□□□ -1.78
PABPC4-222	ENST00000527718	C9orf153	Q5TBE3	101 aa		3.93	□□□□□ -1.78
PABPC4-222	ENST00000527718	PRR15	Q8IV56	129 aa		3.93	□□□□□ -1.78
PABPC4-222	ENST00000527718		Q8N377	158 aa		3.93	□□□□□ -1.78
PABPC4-222	ENST00000527718		Q9BRP9	147 aa		3.93	□□□□□ -1.78
PABPC4-222	ENST00000527718	C8orf87	E5RJ46	101 aa		3.92	□□□□□ -1.78
PABPC4-222	ENST00000527718	ATOX1	O00244	68 aa		3.92	□□□□□ -1.78
PABPC4-222	ENST00000527718	ZNF861P	O60384	105 aa		3.92	□□□□□ -1.78
PABPC4-222	ENST00000527718	STARD9	Q9P2P6	4700 aa		3.92	□□□□□ -1.78
PABPC4-222	ENST00000527718	ALMS1	Q8TCU4	4167 aa		3.92	□□□□□ -1.78
PABPC4-222	ENST00000527718	IGLV8-61	A0A075B6I0	122 aa		3.91	□□□□□ -1.78
PABPC4-222	ENST00000527718	HAMP	P81172	84 aa		3.91	□□□□□ -1.78
PABPC4-222	ENST00000527718	PRLH	P81277	87 aa		3.91	□□□□□ -1.78
PABPC4-222	ENST00000527718	C3orf22	Q8N5N4	141 aa		3.91	□□□□□ -1.78
PABPC4-222	ENST00000527718		Q8NBF4	154 aa		3.91	□□□□□ -1.78
PABPC4-222	ENST00000527718	LINC00846	Q9NV44	126 aa		3.91	□□□□□ -1.78
PABPC4-222	ENST00000527718	RBM12B-AS1	Q9P1G2	102 aa		3.91	□□□□□ -1.78
PABPC4-222	ENST00000527718	VPS13D	Q5THJ4	4388 aa		3.9	□□□□□ -1.78
PABPC4-222	ENST00000527718	BPY2	O14599	106 aa		3.9	□□□□□ -1.79
PABPC4-222	ENST00000527718	CRYGA	P11844	174 aa		3.9	□□□□□ -1.79
PABPC4-222	ENST00000527718	HIST1H4A	P62805	103 aa	Known RBP	3.9	□□□□□ -1.79
PABPC4-222	ENST00000527718		Q6ZVQ6	151 aa		3.9	□□□□□ -1.79
PABPC4-222	ENST00000527718	KRTAP7-1	Q8IUC3	87 aa		3.9	□□□□□ -1.79
PABPC4-222	ENST00000527718	KMT2C	Q8NEZ4	4911 aa	Known RBP	3.9	□□□□□ -1.79
PABPC4-222	ENST00000527718	BRK1	Q8WUW1	75 aa		3.89	□□□□□ -1.79
PABPC4-222	ENST00000527718	SPRR4	Q96PI1	79 aa		3.89	□□□□□ -1.79
PABPC4-222	ENST00000527718	SACS	Q9NZJ4	4579 aa		3.88	□□□□□ -1.79
PABPC4-222	ENST00000527718	PLEC	Q15149	4684 aa	Known RBP	3.88	□□□□□ -1.79
PABPC4-222	ENST00000527718	NDUFB1	O75438	58 aa		3.88	□□□□□ -1.79
PABPC4-222	ENST00000527718	IGLV7-43	P04211	117 aa		3.88	□□□□□ -1.79
PABPC4-222	ENST00000527718	LINC01547	P58512	204 aa	Predicted RBP	3.88	□□□□□ -1.79
PABPC4-222	ENST00000527718	LINC00483	Q53H64	154 aa		3.88	□□□□□ -1.79
PABPC4-222	ENST00000527718	ST20-AS1	Q8NBB2	130 aa		3.88	□□□□□ -1.79
PABPC4-222	ENST00000527718	PSORS1C2	Q9UIG4	136 aa		3.88	□□□□□ -1.79
PABPC4-222	ENST00000527718	NDUFS5	O43920	106 aa		3.87	□□□□□ -1.79
PABPC4-222	ENST00000527718	CDK2AP2	O75956	126 aa		3.87	□□□□□ -1.79
PABPC4-222	ENST00000527718	SEC61B	P60468	96 aa	Known RBP	3.87	□□□□□ -1.79
PABPC4-222	ENST00000527718		Q6ZSA8	131 aa		3.87	□□□□□ -1.79
PABPC4-222	ENST00000527718	KRTAP13-1	Q8IUC0	172 aa		3.87	□□□□□ -1.79
PABPC4-222	ENST00000527718	SMIM26	A0A096LP01	95 aa		3.86	□□□□□ -1.79
PABPC4-222	ENST00000527718	IGKV3D-7	A0A0C4DH55	119 aa		3.86	□□□□□ -1.79
PABPC4-222	ENST00000527718	ERC2-IT1	O76042	136 aa		3.86	□□□□□ -1.79
PABPC4-222	ENST00000527718	FAM229B	Q4G0N7	80 aa		3.86	□□□□□ -1.79
PABPC4-222	ENST00000527718	SSBP3-AS1	Q7Z2R9	100 aa		3.86	□□□□□ -1.79
PABPC4-222	ENST00000527718	KTN1-AS1	Q86SY8	53 aa		3.86	□□□□□ -1.79
PABPC4-222	ENST00000527718	CIRBP-AS1	Q8TBR5	109 aa		3.86	□□□□□ -1.79
PABPC4-222	ENST00000527718	LYST	Q99698	3801 aa		3.86	□□□□□ -1.79
PABPC4-222	ENST00000527718	IGFL1	Q6UW32	110 aa		3.85	□□□□□ -1.79
PABPC4-222	ENST00000527718	SMIM29	Q86T20	159 aa		3.85	□□□□□ -1.79
PABPC4-222	ENST00000527718	DNAH6	Q9C0G6	4158 aa		3.84	□□□□□ -1.79
PABPC4-222	ENST00000527718	SCX	Q7RTU7	201 aa		3.84	□□□□□ -1.79
PABPC4-222	ENST00000527718		A0A087WSZ3	146 aa		3.83	□□□□□ -1.8
PABPC4-222	ENST00000527718	IGLV9-49	A0A0B4J1Y8	123 aa		3.83	□□□□□ -1.8
PABPC4-222	ENST00000527718	PANO1	I0J062	215 aa		3.83	□□□□□ -1.8
PABPC4-222	ENST00000527718	LIMD2	Q9BT23	127 aa		3.83	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms