RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 LINC01558Q9Y6Z2 57 aa4.83□□□□□ -1.64
SOX6-208ENST00000527619 NIPBLQ6KC79 2804 aaeCLIP4.83□□□□□ -1.64
SOX6-208ENST00000527619 C1orf137Q5JT78 98 aa4.83□□□□□ -1.64
SOX6-208ENST00000527619 KCNQ1DNQ9H478 68 aa4.83□□□□□ -1.64
SOX6-208ENST00000527619 SPRR4Q96PI1 79 aa4.82□□□□□ -1.64
SOX6-208ENST00000527619 PRR34Q9NV39 138 aa4.82□□□□□ -1.64
SOX6-208ENST00000527619 SETD2Q9BYW2 2564 aaPredicted RBP4.82□□□□□ -1.64
SOX6-208ENST00000527619 EGFEM1PQ0D2K5 195 aa4.82□□□□□ -1.64
SOX6-208ENST00000527619 CSAG1Q6PB30 78 aa4.82□□□□□ -1.64
SOX6-208ENST00000527619 NOTCH2NLQ7Z3S9 236 aa4.82□□□□□ -1.64
SOX6-208ENST00000527619 CAMK2N2Q96S95 79 aa4.82□□□□□ -1.64
SOX6-208ENST00000527619 ROMO1P60602 79 aa4.81□□□□□ -1.64
SOX6-208ENST00000527619 RTL8CO15255 209 aa4.81□□□□□ -1.64
SOX6-208ENST00000527619 KRTAP1-1Q07627 177 aa4.8□□□□□ -1.64
SOX6-208ENST00000527619 NSD1Q96L73 2696 aaPredicted RBP4.8□□□□□ -1.64
SOX6-208ENST00000527619 LELP1Q5T871 98 aa4.8□□□□□ -1.64
SOX6-208ENST00000527619 PLAC8Q9NZF1 115 aa4.8□□□□□ -1.64
SOX6-208ENST00000527619 DHRS4-AS1Q9P1J3 65 aa4.8□□□□□ -1.64
SOX6-208ENST00000527619 MXRA5Q9NR99 2828 aa4.8□□□□□ -1.64
SOX6-208ENST00000527619 CUBNO60494 3623 aa4.8□□□□□ -1.64
SOX6-208ENST00000527619 JMJD1CQ15652 2540 aa4.79□□□□□ -1.64
SOX6-208ENST00000527619 H3BPC8 53 aa4.79□□□□□ -1.64
SOX6-208ENST00000527619 FN1P02751 2386 aaKnown RBP4.79□□□□□ -1.64
SOX6-208ENST00000527619 Q6ZR54 194 aa4.78□□□□□ -1.64
SOX6-208ENST00000527619 COA5Q86WW8 74 aa4.78□□□□□ -1.64
SOX6-208ENST00000527619 H0Y9P7 68 aa4.78□□□□□ -1.64
SOX6-208ENST00000527619 WFDC13Q8IUB5 93 aa4.78□□□□□ -1.64
SOX6-208ENST00000527619 CNBPP62633 177 aaKnown RBP4.77□□□□□ -1.65
SOX6-208ENST00000527619 SPAG11AQ6PDA7 123 aa4.77□□□□□ -1.65
SOX6-208ENST00000527619 IGKV2D-24A0A075B6R9 120 aa4.77□□□□□ -1.65
SOX6-208ENST00000527619 DEFB116Q30KQ4 102 aa4.77□□□□□ -1.65
SOX6-208ENST00000527619 Q6ZRX8 168 aa4.77□□□□□ -1.65
SOX6-208ENST00000527619 WFDC10BQ8IUB3 73 aa4.76□□□□□ -1.65
SOX6-208ENST00000527619 C7orf33Q8WU49 177 aa4.76□□□□□ -1.65
SOX6-208ENST00000527619 NF1P21359 2839 aa4.75□□□□□ -1.65
SOX6-208ENST00000527619 C9orf163Q8N9P6 203 aa4.75□□□□□ -1.65
SOX6-208ENST00000527619 KRTAP16-1A8MUX0 517 aa4.74□□□□□ -1.65
SOX6-208ENST00000527619 KRTAP29-1A8MX34 341 aaPredicted RBP4.74□□□□□ -1.65
SOX6-208ENST00000527619 DEFB4AO15263 64 aa4.74□□□□□ -1.65
SOX6-208ENST00000527619 C15orf56Q8N910 161 aa4.74□□□□□ -1.65
SOX6-208ENST00000527619 KRTAP4-16G5E9R7 235 aaPredicted RBP4.73□□□□□ -1.65
SOX6-208ENST00000527619 MIR22HGQ0VDD5 57 aa4.73□□□□□ -1.65
SOX6-208ENST00000527619 ANK3Q12955 4377 aaKnown RBP4.73□□□□□ -1.65
SOX6-208ENST00000527619 DNAJC9-AS1A6NH13 148 aa4.73□□□□□ -1.65
SOX6-208ENST00000527619 KRTAP26-1Q6PEX3 210 aa4.73□□□□□ -1.65
SOX6-208ENST00000527619 ATRQ13535 2644 aa4.73□□□□□ -1.65
SOX6-208ENST00000527619 IGLV7-46A0A075B6I9 117 aa4.72□□□□□ -1.65
SOX6-208ENST00000527619 HTN3P15516 51 aa4.71□□□□□ -1.65
SOX6-208ENST00000527619 SPRR1AP35321 89 aa4.71□□□□□ -1.65
SOX6-208ENST00000527619 RPL37AP8A6NKH3 93 aa4.71□□□□□ -1.66
SOX6-208ENST00000527619 IGLV1-50A0A075B6I6 118 aa4.7□□□□□ -1.66
SOX6-208ENST00000527619 RPL37AP61513 92 aaKnown RBP4.7□□□□□ -1.66
SOX6-208ENST00000527619 IGFL1Q6UW32 110 aa4.7□□□□□ -1.66
SOX6-208ENST00000527619 DEFB135Q30KP9 77 aa4.69□□□□□ -1.66
SOX6-208ENST00000527619 NBEAL2Q6ZNJ1 2754 aa4.69□□□□□ -1.66
SOX6-208ENST00000527619 A0A087WSZ3 146 aa4.69□□□□□ -1.66
SOX6-208ENST00000527619 COL6A5A8TX70 2615 aa4.68□□□□□ -1.66
SOX6-208ENST00000527619 IGLV5-37A0A075B6J1 123 aa4.68□□□□□ -1.66
SOX6-208ENST00000527619 A0A0G2JQZ4 141 aa4.68□□□□□ -1.66
SOX6-208ENST00000527619 A0A1W2PNN7 141 aa4.68□□□□□ -1.66
SOX6-208ENST00000527619 LCE2DQ5TA82 110 aaPredicted RBP4.68□□□□□ -1.66
SOX6-208ENST00000527619 SPART-AS1P0CW21 52 aa4.68□□□□□ -1.66
SOX6-208ENST00000527619 P0C880 135 aa4.67□□□□□ -1.66
SOX6-208ENST00000527619 TLX1NBP0CAT3 122 aa4.67□□□□□ -1.66
SOX6-208ENST00000527619 FBN1P35555 2871 aaKnown RBP4.66□□□□□ -1.66
SOX6-208ENST00000527619 IGLV8-61A0A075B6I0 122 aa4.66□□□□□ -1.66
SOX6-208ENST00000527619 FAM168BA1KXE4 195 aa4.66□□□□□ -1.66
SOX6-208ENST00000527619 A8MWP4 228 aa4.66□□□□□ -1.66
SOX6-208ENST00000527619 PCOTHQ58A44 107 aa4.64□□□□□ -1.67
SOX6-208ENST00000527619 KRTAP24-1Q3LI83 254 aa4.64□□□□□ -1.67
SOX6-208ENST00000527619 IGLV5-52A0A0A0MRZ9 124 aa4.63□□□□□ -1.67
SOX6-208ENST00000527619 STAB1Q9NY15 2570 aa4.63□□□□□ -1.67
SOX6-208ENST00000527619 CHTF8P0CG12 524 aa4.63□□□□□ -1.67
SOX6-208ENST00000527619 SPATA8Q6RVD6 105 aa4.63□□□□□ -1.67
SOX6-208ENST00000527619 KRTAP7-1Q8IUC3 87 aa4.63□□□□□ -1.67
SOX6-208ENST00000527619 MMP24-AS1A0A0U1RRL7 71 aa4.62□□□□□ -1.67
SOX6-208ENST00000527619 LINC00472Q9H8W2 130 aa4.62□□□□□ -1.67
SOX6-208ENST00000527619 KRTAP25-1Q3LHN0 102 aa4.61□□□□□ -1.67
SOX6-208ENST00000527619 KRTAP21-3Q3LHN1 58 aa4.61□□□□□ -1.67
SOX6-208ENST00000527619 TENM1Q9UKZ4 2725 aa4.61□□□□□ -1.67
SOX6-208ENST00000527619 HRES1P13985 223 aa4.61□□□□□ -1.67
SOX6-208ENST00000527619 H3BNG1 76 aa4.6□□□□□ -1.67
SOX6-208ENST00000527619 TP53AIP1Q9HCN2 124 aa4.6□□□□□ -1.67
SOX6-208ENST00000527619 LINC01556Q5JQF7 62 aa4.59□□□□□ -1.67
SOX6-208ENST00000527619 LINC00483Q53H64 154 aa4.59□□□□□ -1.68
SOX6-208ENST00000527619 C8orf17Q9NRJ1 99 aa4.58□□□□□ -1.68
SOX6-208ENST00000527619 IGKV2-24A0A0C4DH68 120 aa4.58□□□□□ -1.68
SOX6-208ENST00000527619 LUZP6Q538Z0 58 aa4.58□□□□□ -1.68
SOX6-208ENST00000527619 PRLHP81277 87 aa4.57□□□□□ -1.68
SOX6-208ENST00000527619 WWC2-AS2Q96NR7 200 aa4.57□□□□□ -1.68
SOX6-208ENST00000527619 DEFB131BA0A096LNP1 70 aa4.57□□□□□ -1.68
SOX6-208ENST00000527619 ZNF861PO60384 105 aa4.57□□□□□ -1.68
SOX6-208ENST00000527619 KRTAP10-3P60369 221 aa4.57□□□□□ -1.68
SOX6-208ENST00000527619 ALMS1Q8TCU4 4167 aa4.56□□□□□ -1.68
SOX6-208ENST00000527619 C20orf166-AS1Q96NR2 134 aa4.55□□□□□ -1.68
SOX6-208ENST00000527619 NDUFAF8A1L188 74 aa4.54□□□□□ -1.68
SOX6-208ENST00000527619 SPRR1BP22528 89 aa4.54□□□□□ -1.68
SOX6-208ENST00000527619 DNAH1Q9P2D7 4330 aa4.53□□□□□ -1.68
SOX6-208ENST00000527619 UQCR11O14957 56 aa4.53□□□□□ -1.68
SOX6-208ENST00000527619 DNAH10OSP0CZ25 163 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms