RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 PPDPFLQ8WWR9 84 aa9.58□□□□□ -0.88
SMCO4-204ENST00000527149 COX6CP09669 75 aa9.57□□□□□ -0.88
SMCO4-204ENST00000527149 SPAG11AQ6PDA7 123 aa9.57□□□□□ -0.88
SMCO4-204ENST00000527149 NAA38Q9BRA0 125 aaKnown RBP9.56□□□□□ -0.88
SMCO4-204ENST00000527149 OCIAD2Q56VL3 154 aa9.55□□□□□ -0.88
SMCO4-204ENST00000527149 LST1O00453 97 aa9.54□□□□□ -0.88
SMCO4-204ENST00000527149 SNCGO76070 127 aa9.54□□□□□ -0.88
SMCO4-204ENST00000527149 SNHG12Q9BXW3 62 aa9.54□□□□□ -0.88
SMCO4-204ENST00000527149 LPAP08519 4548 aa9.54□□□□□ -0.88
SMCO4-204ENST00000527149 IGLV8-61A0A075B6I0 122 aa9.53□□□□□ -0.88
SMCO4-204ENST00000527149 SPINK1P00995 79 aa9.52□□□□□ -0.89
SMCO4-204ENST00000527149 TRACP01848 142 aa9.52□□□□□ -0.89
SMCO4-204ENST00000527149 TAX1BP3O14907 124 aa9.51□□□□□ -0.89
SMCO4-204ENST00000527149 RPS29P62273 56 aaKnown RBP9.51□□□□□ -0.89
SMCO4-204ENST00000527149 A0A0G2JQZ4 141 aa9.5□□□□□ -0.89
SMCO4-204ENST00000527149 SCGB1C2P0DMR2 95 aa9.5□□□□□ -0.89
SMCO4-204ENST00000527149 C4orf48Q5BLP8 95 aa9.5□□□□□ -0.89
SMCO4-204ENST00000527149 F8WEM9 126 aa9.49□□□□□ -0.89
SMCO4-204ENST00000527149 DNAL4O96015 105 aa9.49□□□□□ -0.89
SMCO4-204ENST00000527149 TCL1BO95988 128 aa9.48□□□□□ -0.89
SMCO4-204ENST00000527149 ORMDL1Q9P0S3 153 aa9.48□□□□□ -0.89
SMCO4-204ENST00000527149 C9orf118A6NHY6 69 aa9.47□□□□□ -0.89
SMCO4-204ENST00000527149 H3BUT2 72 aa9.47□□□□□ -0.89
SMCO4-204ENST00000527149 CD164Q04900 197 aa9.47□□□□□ -0.89
SMCO4-204ENST00000527149 RETNLBQ9BQ08 111 aa9.47□□□□□ -0.89
SMCO4-204ENST00000527149 NDUFV3P56181 108 aaKnown RBP9.46□□□□□ -0.9
SMCO4-204ENST00000527149 IGFL1Q6UW32 110 aa9.46□□□□□ -0.9
SMCO4-204ENST00000527149 GHRHP01286 108 aa9.45□□□□□ -0.9
SMCO4-204ENST00000527149 Q6JHZ5 121 aa9.45□□□□□ -0.9
SMCO4-204ENST00000527149 HRCT1Q6UXD1 115 aa9.44□□□□□ -0.9
SMCO4-204ENST00000527149 FABP2P12104 132 aa9.43□□□□□ -0.9
SMCO4-204ENST00000527149 LYRM7Q5U5X0 104 aa9.43□□□□□ -0.9
SMCO4-204ENST00000527149 PCP4L1A6NKN8 68 aa9.42□□□□□ -0.9
SMCO4-204ENST00000527149 H3BQ85 93 aa9.42□□□□□ -0.9
SMCO4-204ENST00000527149 ATXN8Q156A1 80 aa9.42□□□□□ -0.9
SMCO4-204ENST00000527149 A0A1W2PPM0 123 aa9.41□□□□□ -0.9
SMCO4-204ENST00000527149 PRR4Q16378 134 aa9.41□□□□□ -0.9
SMCO4-204ENST00000527149 UBR4Q5T4S7 5183 aa9.41□□□□□ -0.9
SMCO4-204ENST00000527149 TMEM256-PLSCR3K7ERE1 68 aa9.4□□□□□ -0.9
SMCO4-204ENST00000527149 COL5A1-AS1Q5SY13 56 aa9.4□□□□□ -0.9
SMCO4-204ENST00000527149 Q5XG85 94 aa9.4□□□□□ -0.9
SMCO4-204ENST00000527149 H3BMG7 143 aa9.39□□□□□ -0.91
SMCO4-204ENST00000527149 UBE2V1Q13404 147 aa9.39□□□□□ -0.91
SMCO4-204ENST00000527149 TRBV20-1A0A075B6N2 111 aa9.38□□□□□ -0.91
SMCO4-204ENST00000527149 LIMD2Q9BT23 127 aa9.38□□□□□ -0.91
SMCO4-204ENST00000527149 FP248Q71RG6 208 aaPredicted RBP9.37□□□□□ -0.91
SMCO4-204ENST00000527149 BAALC-AS2P0C853 105 aa9.36□□□□□ -0.91
SMCO4-204ENST00000527149 TRBV7-7A0A0K0K1E9 115 aa9.35□□□□□ -0.91
SMCO4-204ENST00000527149 IGLV7-46A0A075B6I9 117 aa9.34□□□□□ -0.91
SMCO4-204ENST00000527149 Q6Q795 121 aa9.34□□□□□ -0.91
SMCO4-204ENST00000527149 A0A1B0GV72 72 aa9.33□□□□□ -0.92
SMCO4-204ENST00000527149 ANKRD29Q8N6D5 301 aa9.33□□□□□ -0.92
SMCO4-204ENST00000527149 A0A1W2PNM2 257 aa9.32□□□□□ -0.92
SMCO4-204ENST00000527149 C9JAW5 83 aa9.32□□□□□ -0.92
SMCO4-204ENST00000527149 TRBV7-4A0A0J9YYF1 115 aa9.31□□□□□ -0.92
SMCO4-204ENST00000527149 TPRXLQ17RH7 258 aa9.31□□□□□ -0.92
SMCO4-204ENST00000527149 C1orf195Q5TG92 126 aa9.3□□□□□ -0.92
SMCO4-204ENST00000527149 TEN1Q86WV5 123 aa9.3□□□□□ -0.92
SMCO4-204ENST00000527149 SPCS1Q9Y6A9 102 aa9.3□□□□□ -0.92
SMCO4-204ENST00000527149 ASB16-AS1Q495Z4 193 aa9.29□□□□□ -0.92
SMCO4-204ENST00000527149 KRTAP13-3Q3SY46 172 aa9.27□□□□□ -0.93
SMCO4-204ENST00000527149 RBM3P98179 157 aaKnown RBP9.26□□□□□ -0.93
SMCO4-204ENST00000527149 MTURNQ8N3F0 131 aa9.26□□□□□ -0.93
SMCO4-204ENST00000527149 H3BT86 120 aa9.25□□□□□ -0.93
SMCO4-204ENST00000527149 MUC17Q685J3 4493 aa9.25□□□□□ -0.93
SMCO4-204ENST00000527149 A0A087WSZ3 146 aa9.24□□□□□ -0.93
SMCO4-204ENST00000527149 OBSCN-AS1Q96MR7 158 aa9.24□□□□□ -0.93
SMCO4-204ENST00000527149 K7EP34 96 aa9.23□□□□□ -0.93
SMCO4-204ENST00000527149 CCKP06307 115 aa9.23□□□□□ -0.93
SMCO4-204ENST00000527149 JMJD7-PLA2G4BH0Y9G9 81 aa9.22□□□□□ -0.93
SMCO4-204ENST00000527149 SMCPP49901 116 aaPredicted RBP9.21□□□□□ -0.94
SMCO4-204ENST00000527149 DSCR8Q96T75 97 aa9.21□□□□□ -0.94
SMCO4-204ENST00000527149 SS18L2Q9UHA2 77 aa9.21□□□□□ -0.94
SMCO4-204ENST00000527149 PRO0461Q9UI25 63 aa9.21□□□□□ -0.94
SMCO4-204ENST00000527149 RNF213Q63HN8 5207 aa9.2□□□□□ -0.94
SMCO4-204ENST00000527149 LOC110117498A0A087WWA1 95 aa9.19□□□□□ -0.94
SMCO4-204ENST00000527149 Q6ZQT0 140 aa9.19□□□□□ -0.94
SMCO4-204ENST00000527149 Q96NJ1 140 aa9.19□□□□□ -0.94
SMCO4-204ENST00000527149 C14orf132Q9NPU4 83 aa9.17□□□□□ -0.94
SMCO4-204ENST00000527149 CDIP1Q9H305 208 aa9.16□□□□□ -0.94
SMCO4-204ENST00000527149 VPS25Q9BRG1 176 aa9.15□□□□□ -0.94
SMCO4-204ENST00000527149 PDE6GP18545 87 aa9.13□□□□□ -0.95
SMCO4-204ENST00000527149 GTF2H5Q6ZYL4 71 aa9.12□□□□□ -0.95
SMCO4-204ENST00000527149 XP32Q5T750 250 aa9.11□□□□□ -0.95
SMCO4-204ENST00000527149 LINC00472Q9H8W2 130 aa9.11□□□□□ -0.95
SMCO4-204ENST00000527149 C9orf92A6NGG3 77 aa9.1□□□□□ -0.95
SMCO4-204ENST00000527149 A0A1B0GW54 56 aa9.08□□□□□ -0.96
SMCO4-204ENST00000527149 C21orf62-AS1Q17RA5 79 aa9.06□□□□□ -0.96
SMCO4-204ENST00000527149 MUC2Q02817 5179 aa9.06□□□□□ -0.96
SMCO4-204ENST00000527149 F8W1H4 67 aa9.03□□□□□ -0.96
SMCO4-204ENST00000527149 SIGMAR1Q99720 223 aa9.03□□□□□ -0.96
SMCO4-204ENST00000527149 IGKV4-1P06312 121 aa9.02□□□□□ -0.97
SMCO4-204ENST00000527149 DEFB116Q30KQ4 102 aa9.02□□□□□ -0.97
SMCO4-204ENST00000527149 A0A1B0GV90 55 aa8.97□□□□□ -0.97
SMCO4-204ENST00000527149 ETDBQ3ZM63 59 aa8.97□□□□□ -0.97
SMCO4-204ENST00000527149 J3KT08 172 aa8.95□□□□□ -0.98
SMCO4-204ENST00000527149 RPL37P61927 97 aaKnown RBP8.95□□□□□ -0.98
SMCO4-204ENST00000527149 DSCR10P59022 87 aa8.94□□□□□ -0.98
SMCO4-204ENST00000527149 SEC61BP60468 96 aaKnown RBP8.94□□□□□ -0.98
SMCO4-204ENST00000527149 NOTCH2NLQ7Z3S9 236 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms