RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 PCP4L1A6NKN8 68 aa5.81□□□□□ -1.48
SDCBP-211ENST00000523441 SERF1AO75920 110 aa5.81□□□□□ -1.48
SDCBP-211ENST00000523441 IGFL1Q6UW32 110 aa5.81□□□□□ -1.48
SDCBP-211ENST00000523441 A6NDN8 102 aa5.8□□□□□ -1.48
SDCBP-211ENST00000523441 KRTAP6-3Q3LI67 103 aa5.8□□□□□ -1.48
SDCBP-211ENST00000523441 LITAFQ99732 161 aa5.8□□□□□ -1.48
SDCBP-211ENST00000523441 A0A1B0GWB2 263 aa5.79□□□□□ -1.48
SDCBP-211ENST00000523441 KRTAP19-6Q3LI70 58 aa5.79□□□□□ -1.48
SDCBP-211ENST00000523441 TRBV7-7A0A0K0K1E9 115 aa5.78□□□□□ -1.48
SDCBP-211ENST00000523441 E9PLD3 99 aa5.77□□□□□ -1.49
SDCBP-211ENST00000523441 TTTY13Q9BZ97 58 aa5.77□□□□□ -1.49
SDCBP-211ENST00000523441 TRBV7-6A0A0J9YX20 115 aa5.76□□□□□ -1.49
SDCBP-211ENST00000523441 LST1O00453 97 aa5.76□□□□□ -1.49
SDCBP-211ENST00000523441 LINC00310P59036 64 aa5.76□□□□□ -1.49
SDCBP-211ENST00000523441 HSPB8Q9UJY1 196 aa5.76□□□□□ -1.49
SDCBP-211ENST00000523441 ZNF815PA8K554 130 aa5.75□□□□□ -1.49
SDCBP-211ENST00000523441 APOC3P02656 99 aa5.75□□□□□ -1.49
SDCBP-211ENST00000523441 CLEC2BQ92478 149 aa5.75□□□□□ -1.49
SDCBP-211ENST00000523441 A8MUU9 505 aa5.74□□□□□ -1.49
SDCBP-211ENST00000523441 DSCR10P59022 87 aa5.74□□□□□ -1.49
SDCBP-211ENST00000523441 KRTAP4-12Q9BQ66 201 aa5.74□□□□□ -1.49
SDCBP-211ENST00000523441 RBM12B-AS1Q9P1G2 102 aa5.74□□□□□ -1.49
SDCBP-211ENST00000523441 TIMM17BO60830 172 aa5.73□□□□□ -1.49
SDCBP-211ENST00000523441 NHP2Q9NX24 153 aaKnown RBP5.73□□□□□ -1.49
SDCBP-211ENST00000523441 KRTAP16-1A8MUX0 517 aa5.72□□□□□ -1.49
SDCBP-211ENST00000523441 C21orf62-AS1Q17RA5 79 aa5.72□□□□□ -1.49
SDCBP-211ENST00000523441 Q6JHZ5 121 aa5.72□□□□□ -1.49
SDCBP-211ENST00000523441 KRTAP19-4Q3LI73 84 aa5.71□□□□□ -1.5
SDCBP-211ENST00000523441 TSTD3H0UI37 97 aa5.7□□□□□ -1.5
SDCBP-211ENST00000523441 TRGC2P03986 189 aa5.7□□□□□ -1.5
SDCBP-211ENST00000523441 Q6ZQY7 126 aa5.7□□□□□ -1.5
SDCBP-211ENST00000523441 SMIM11BQ8TCY0 68 aa5.7□□□□□ -1.5
SDCBP-211ENST00000523441 TRAV13-2A0A0B4J235 113 aa5.69□□□□□ -1.5
SDCBP-211ENST00000523441 A4D1N5 150 aa5.69□□□□□ -1.5
SDCBP-211ENST00000523441 H3BUT2 72 aa5.69□□□□□ -1.5
SDCBP-211ENST00000523441 OCIAD2Q56VL3 154 aa5.69□□□□□ -1.5
SDCBP-211ENST00000523441 SCGB1D4Q6XE38 83 aa5.69□□□□□ -1.5
SDCBP-211ENST00000523441 NEBP20929 6669 aa5.69□□□□□ -1.5
SDCBP-211ENST00000523441 HRES1P13985 223 aa5.68□□□□□ -1.5
SDCBP-211ENST00000523441 S100A2P29034 98 aa5.68□□□□□ -1.5
SDCBP-211ENST00000523441 Q8N9P0 234 aaPredicted RBP5.67□□□□□ -1.5
SDCBP-211ENST00000523441 YPEL4Q96NS1 127 aa5.67□□□□□ -1.5
SDCBP-211ENST00000523441 MUSTN1Q8IVN3 82 aa5.66□□□□□ -1.5
SDCBP-211ENST00000523441 SVIPQ8NHG7 77 aa5.66□□□□□ -1.5
SDCBP-211ENST00000523441 hADV29S1A0JD25 119 aa5.65□□□□□ -1.5
SDCBP-211ENST00000523441 KRTAP20-1Q3LI63 56 aa5.65□□□□□ -1.5
SDCBP-211ENST00000523441 Q6ZVH6 145 aa5.65□□□□□ -1.5
SDCBP-211ENST00000523441 SIGMAR1Q99720 223 aa5.65□□□□□ -1.5
SDCBP-211ENST00000523441 COLCA2A8K830 154 aa5.64□□□□□ -1.51
SDCBP-211ENST00000523441 SYS1-DBNDD2H3BUS1 97 aa5.64□□□□□ -1.51
SDCBP-211ENST00000523441 VAMP3Q15836 100 aa5.64□□□□□ -1.51
SDCBP-211ENST00000523441 LINC00575Q6W349 94 aa5.64□□□□□ -1.51
SDCBP-211ENST00000523441 SNHG12Q9BXW3 62 aa5.64□□□□□ -1.51
SDCBP-211ENST00000523441 C9orf118A6NHY6 69 aa5.63□□□□□ -1.51
SDCBP-211ENST00000523441 SNRPEP62304 92 aaKnown RBP5.63□□□□□ -1.51
SDCBP-211ENST00000523441 MPLKIPQ8TAP9 179 aa5.63□□□□□ -1.51
SDCBP-211ENST00000523441 SS18L2Q9UHA2 77 aa5.63□□□□□ -1.51
SDCBP-211ENST00000523441 COPS9Q8WXC6 57 aa5.62□□□□□ -1.51
SDCBP-211ENST00000523441 A0A087WSZ3 146 aa5.61□□□□□ -1.51
SDCBP-211ENST00000523441 NOTCH2NLQ7Z3S9 236 aa5.61□□□□□ -1.51
SDCBP-211ENST00000523441 C14orf144Q96I85 54 aa5.61□□□□□ -1.51
SDCBP-211ENST00000523441 IFITM1P13164 125 aa5.6□□□□□ -1.51
SDCBP-211ENST00000523441 MUC12Q9UKN1 5478 aa5.6□□□□□ -1.51
SDCBP-211ENST00000523441 PCP4P48539 62 aa5.59□□□□□ -1.51
SDCBP-211ENST00000523441 LINC00313P59037 77 aa5.59□□□□□ -1.51
SDCBP-211ENST00000523441 MTURNQ8N3F0 131 aa5.59□□□□□ -1.51
SDCBP-211ENST00000523441 LINC01545Q5VT33 79 aa5.57□□□□□ -1.52
SDCBP-211ENST00000523441 M0R143 59 aa5.56□□□□□ -1.52
SDCBP-211ENST00000523441 A0A1B0GV90 55 aa5.55□□□□□ -1.52
SDCBP-211ENST00000523441 A8MWP4 228 aa5.55□□□□□ -1.52
SDCBP-211ENST00000523441 HSBP1L1C9JCN9 74 aa5.55□□□□□ -1.52
SDCBP-211ENST00000523441 PYY3Q5JQD4 70 aa5.55□□□□□ -1.52
SDCBP-211ENST00000523441 PET117Q6UWS5 81 aa5.55□□□□□ -1.52
SDCBP-211ENST00000523441 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.55□□□□□ -1.52
SDCBP-211ENST00000523441 TEN1Q86WV5 123 aa5.55□□□□□ -1.52
SDCBP-211ENST00000523441 ATOH7Q8N100 152 aa5.55□□□□□ -1.52
SDCBP-211ENST00000523441 DLEU1O43261 78 aa5.54□□□□□ -1.52
SDCBP-211ENST00000523441 SCGB1D1O95968 90 aa5.54□□□□□ -1.52
SDCBP-211ENST00000523441 IGKV4-1P06312 121 aa5.54□□□□□ -1.52
SDCBP-211ENST00000523441 DEFB116Q30KQ4 102 aa5.54□□□□□ -1.52
SDCBP-211ENST00000523441 COA6Q5JTJ3 125 aaKnown RBP5.54□□□□□ -1.52
SDCBP-211ENST00000523441 LCE3BQ5TA77 95 aa5.54□□□□□ -1.52
SDCBP-211ENST00000523441 KRTDAPP60985 99 aa5.53□□□□□ -1.52
SDCBP-211ENST00000523441 C3orf79P0CE67 100 aa5.52□□□□□ -1.53
SDCBP-211ENST00000523441 IGHV6-1A0A0B4J1U7 121 aa5.51□□□□□ -1.53
SDCBP-211ENST00000523441 HIST3H2BBQ8N257 126 aa5.51□□□□□ -1.53
SDCBP-211ENST00000523441 PPDPFLQ8WWR9 84 aa5.5□□□□□ -1.53
SDCBP-211ENST00000523441 A0A1B0GV72 72 aa5.49□□□□□ -1.53
SDCBP-211ENST00000523441 NDUFV3P56181 108 aaKnown RBP5.49□□□□□ -1.53
SDCBP-211ENST00000523441 SPINK7P58062 85 aa5.48□□□□□ -1.53
SDCBP-211ENST00000523441 H3BMG7 143 aa5.47□□□□□ -1.53
SDCBP-211ENST00000523441 COL5A1-AS1Q5SY13 56 aa5.47□□□□□ -1.53
SDCBP-211ENST00000523441 BVES-AS1Q5T3Y7 98 aa5.47□□□□□ -1.53
SDCBP-211ENST00000523441 WFDC13Q8IUB5 93 aa5.47□□□□□ -1.53
SDCBP-211ENST00000523441 A6NN06 94 aa5.46□□□□□ -1.54
SDCBP-211ENST00000523441 HIST1H2BKO60814 126 aa5.46□□□□□ -1.54
SDCBP-211ENST00000523441 HIST1H2BJP06899 126 aa5.46□□□□□ -1.54
SDCBP-211ENST00000523441 HIST1H2BOP23527 126 aa5.46□□□□□ -1.54
SDCBP-211ENST00000523441 HIST1H2BBP33778 126 aa5.46□□□□□ -1.54
SDCBP-211ENST00000523441 HIST1H2BDP58876 126 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 283.6 ms