RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 PSMB2P49721 201 aa10.46□□□□□ -0.73
VEGFA-222ENST00000520948 MUC2Q02817 5179 aa10.45□□□□□ -0.74
VEGFA-222ENST00000520948 SPAG11AQ6PDA7 123 aa10.45□□□□□ -0.74
VEGFA-222ENST00000520948 CLEC2BQ92478 149 aa10.44□□□□□ -0.74
VEGFA-222ENST00000520948 SNCGO76070 127 aa10.43□□□□□ -0.74
VEGFA-222ENST00000520948 COX6CP09669 75 aa10.43□□□□□ -0.74
VEGFA-222ENST00000520948 C9orf153Q5TBE3 101 aa10.43□□□□□ -0.74
VEGFA-222ENST00000520948 PPDPFLQ8WWR9 84 aa10.43□□□□□ -0.74
VEGFA-222ENST00000520948 OCIAD2Q56VL3 154 aa10.42□□□□□ -0.74
VEGFA-222ENST00000520948 SPINK1P00995 79 aa10.39□□□□□ -0.75
VEGFA-222ENST00000520948 C4orf48Q5BLP8 95 aa10.39□□□□□ -0.75
VEGFA-222ENST00000520948 IGLV8-61A0A075B6I0 122 aa10.37□□□□□ -0.75
VEGFA-222ENST00000520948 BATFQ16520 125 aa10.37□□□□□ -0.75
VEGFA-222ENST00000520948 SCGB1C2P0DMR2 95 aa10.36□□□□□ -0.75
VEGFA-222ENST00000520948 RPS29P62273 56 aaKnown RBP10.36□□□□□ -0.75
VEGFA-222ENST00000520948 A0A0U1RQV1 116 aa10.35□□□□□ -0.75
VEGFA-222ENST00000520948 LST1O00453 97 aa10.35□□□□□ -0.75
VEGFA-222ENST00000520948 TRACP01848 142 aa10.34□□□□□ -0.75
VEGFA-222ENST00000520948 NAA38Q9BRA0 125 aaKnown RBP10.34□□□□□ -0.75
VEGFA-222ENST00000520948 SNHG12Q9BXW3 62 aa10.34□□□□□ -0.75
VEGFA-222ENST00000520948 CD164Q04900 197 aa10.33□□□□□ -0.76
VEGFA-222ENST00000520948 GHRHP01286 108 aa10.32□□□□□ -0.76
VEGFA-222ENST00000520948 KRTAP9-2Q9BYQ4 174 aa10.32□□□□□ -0.76
VEGFA-222ENST00000520948 A0A0G2JQZ4 141 aa10.31□□□□□ -0.76
VEGFA-222ENST00000520948 F8WEM9 126 aa10.31□□□□□ -0.76
VEGFA-222ENST00000520948 TAX1BP3O14907 124 aa10.31□□□□□ -0.76
VEGFA-222ENST00000520948 NDUFV3P56181 108 aaKnown RBP10.31□□□□□ -0.76
VEGFA-222ENST00000520948 DNAL4O96015 105 aa10.3□□□□□ -0.76
VEGFA-222ENST00000520948 ORMDL1Q9P0S3 153 aa10.3□□□□□ -0.76
VEGFA-222ENST00000520948 H3BQ85 93 aa10.29□□□□□ -0.76
VEGFA-222ENST00000520948 TCL1BO95988 128 aa10.29□□□□□ -0.76
VEGFA-222ENST00000520948 Q6JHZ5 121 aa10.29□□□□□ -0.76
VEGFA-222ENST00000520948 C9orf118A6NHY6 69 aa10.28□□□□□ -0.76
VEGFA-222ENST00000520948 RETNLBQ9BQ08 111 aa10.28□□□□□ -0.76
VEGFA-222ENST00000520948 H3BUT2 72 aa10.27□□□□□ -0.77
VEGFA-222ENST00000520948 FABP2P12104 132 aa10.27□□□□□ -0.77
VEGFA-222ENST00000520948 IGFL1Q6UW32 110 aa10.27□□□□□ -0.77
VEGFA-222ENST00000520948 HRCT1Q6UXD1 115 aa10.27□□□□□ -0.77
VEGFA-222ENST00000520948 TMEM256-PLSCR3K7ERE1 68 aa10.26□□□□□ -0.77
VEGFA-222ENST00000520948 ATXN8Q156A1 80 aa10.24□□□□□ -0.77
VEGFA-222ENST00000520948 Q5XG85 94 aa10.24□□□□□ -0.77
VEGFA-222ENST00000520948 H3BMG7 143 aa10.23□□□□□ -0.77
VEGFA-222ENST00000520948 TRBV20-1A0A075B6N2 111 aa10.22□□□□□ -0.77
VEGFA-222ENST00000520948 UBE2V1Q13404 147 aa10.22□□□□□ -0.77
VEGFA-222ENST00000520948 LCE2AQ5TA79 106 aaPredicted RBP10.22□□□□□ -0.77
VEGFA-222ENST00000520948 LYRM7Q5U5X0 104 aa10.22□□□□□ -0.77
VEGFA-222ENST00000520948 PCP4L1A6NKN8 68 aa10.21□□□□□ -0.77
VEGFA-222ENST00000520948 LIMD2Q9BT23 127 aa10.21□□□□□ -0.77
VEGFA-222ENST00000520948 FAT4Q6V0I7 4981 aa10.21□□□□□ -0.78
VEGFA-222ENST00000520948 A0A1W2PPM0 123 aa10.2□□□□□ -0.78
VEGFA-222ENST00000520948 BAALC-AS2P0C853 105 aa10.2□□□□□ -0.78
VEGFA-222ENST00000520948 FP248Q71RG6 208 aaPredicted RBP10.2□□□□□ -0.78
VEGFA-222ENST00000520948 COL5A1-AS1Q5SY13 56 aa10.19□□□□□ -0.78
VEGFA-222ENST00000520948 Q6Q795 121 aa10.18□□□□□ -0.78
VEGFA-222ENST00000520948 IGLV7-46A0A075B6I9 117 aa10.17□□□□□ -0.78
VEGFA-222ENST00000520948 TRBV7-7A0A0K0K1E9 115 aa10.17□□□□□ -0.78
VEGFA-222ENST00000520948 CDIP1Q9H305 208 aa10.16□□□□□ -0.78
VEGFA-222ENST00000520948 MUC17Q685J3 4493 aa10.14□□□□□ -0.79
VEGFA-222ENST00000520948 TEN1Q86WV5 123 aa10.14□□□□□ -0.79
VEGFA-222ENST00000520948 ANKRD29Q8N6D5 301 aa10.14□□□□□ -0.79
VEGFA-222ENST00000520948 A0A1W2PNM2 257 aa10.12□□□□□ -0.79
VEGFA-222ENST00000520948 TPRXLQ17RH7 258 aa10.12□□□□□ -0.79
VEGFA-222ENST00000520948 ASB16-AS1Q495Z4 193 aa10.12□□□□□ -0.79
VEGFA-222ENST00000520948 C1orf195Q5TG92 126 aa10.11□□□□□ -0.79
VEGFA-222ENST00000520948 TRBV7-4A0A0J9YYF1 115 aa10.1□□□□□ -0.79
VEGFA-222ENST00000520948 C9JAW5 83 aa10.1□□□□□ -0.79
VEGFA-222ENST00000520948 A0A1B0GV72 72 aa10.09□□□□□ -0.79
VEGFA-222ENST00000520948 RBM3P98179 157 aaKnown RBP10.09□□□□□ -0.79
VEGFA-222ENST00000520948 KRTAP9-6A0A140TA67 174 aa10.08□□□□□ -0.8
VEGFA-222ENST00000520948 KRTAP13-3Q3SY46 172 aa10.07□□□□□ -0.8
VEGFA-222ENST00000520948 SPCS1Q9Y6A9 102 aa10.07□□□□□ -0.8
VEGFA-222ENST00000520948 JMJD7-PLA2G4BH0Y9G9 81 aa10.04□□□□□ -0.8
VEGFA-222ENST00000520948 H3BT86 120 aa10.04□□□□□ -0.8
VEGFA-222ENST00000520948 OBSCN-AS1Q96MR7 158 aa10.04□□□□□ -0.8
VEGFA-222ENST00000520948 A0A087WSZ3 146 aa10.03□□□□□ -0.8
VEGFA-222ENST00000520948 DSCR8Q96T75 97 aa10.03□□□□□ -0.8
VEGFA-222ENST00000520948 CCKP06307 115 aa10.02□□□□□ -0.81
VEGFA-222ENST00000520948 SS18L2Q9UHA2 77 aa10.02□□□□□ -0.81
VEGFA-222ENST00000520948 K7EP34 96 aa10□□□□□ -0.81
VEGFA-222ENST00000520948 MTURNQ8N3F0 131 aa10□□□□□ -0.81
VEGFA-222ENST00000520948 LOC110117498A0A087WWA1 95 aa9.99□□□□□ -0.81
VEGFA-222ENST00000520948 SMCPP49901 116 aaPredicted RBP9.98□□□□□ -0.81
VEGFA-222ENST00000520948 Q6ZQT0 140 aa9.98□□□□□ -0.81
VEGFA-222ENST00000520948 Q96NJ1 140 aa9.98□□□□□ -0.81
VEGFA-222ENST00000520948 PRO0461Q9UI25 63 aa9.97□□□□□ -0.81
VEGFA-222ENST00000520948 PDE6GP18545 87 aa9.95□□□□□ -0.82
VEGFA-222ENST00000520948 C14orf132Q9NPU4 83 aa9.95□□□□□ -0.82
VEGFA-222ENST00000520948 VPS25Q9BRG1 176 aa9.93□□□□□ -0.82
VEGFA-222ENST00000520948 A0A1B0GW54 56 aa9.91□□□□□ -0.82
VEGFA-222ENST00000520948 GTF2H5Q6ZYL4 71 aa9.91□□□□□ -0.82
VEGFA-222ENST00000520948 LINC00472Q9H8W2 130 aa9.91□□□□□ -0.82
VEGFA-222ENST00000520948 C21orf62-AS1Q17RA5 79 aa9.9□□□□□ -0.82
VEGFA-222ENST00000520948 XP32Q5T750 250 aa9.9□□□□□ -0.82
VEGFA-222ENST00000520948 C9orf92A6NGG3 77 aa9.89□□□□□ -0.83
VEGFA-222ENST00000520948 KRTAP4-1Q9BYQ7 146 aa9.88□□□□□ -0.83
VEGFA-222ENST00000520948 F8W1H4 67 aa9.84□□□□□ -0.83
VEGFA-222ENST00000520948 IGKV4-1P06312 121 aa9.82□□□□□ -0.84
VEGFA-222ENST00000520948 SEC61BP60468 96 aaKnown RBP9.81□□□□□ -0.84
VEGFA-222ENST00000520948 DEFB116Q30KQ4 102 aa9.81□□□□□ -0.84
VEGFA-222ENST00000520948 SIGMAR1Q99720 223 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms