RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 SSBP3-AS1Q7Z2R9 100 aa6.85□□□□□ -1.31
HPS4-218ENST00000519774 TSTD3H0UI37 97 aa6.84□□□□□ -1.31
HPS4-218ENST00000519774 CTAG1AP78358 180 aa6.84□□□□□ -1.31
HPS4-218ENST00000519774 SPAG11AQ6PDA7 123 aa6.84□□□□□ -1.31
HPS4-218ENST00000519774 CDIP1Q9H305 208 aa6.84□□□□□ -1.31
HPS4-218ENST00000519774 H0YGX0 51 aa6.83□□□□□ -1.32
HPS4-218ENST00000519774 TRIAP1O43715 76 aa6.83□□□□□ -1.32
HPS4-218ENST00000519774 PRR4Q16378 134 aa6.83□□□□□ -1.32
HPS4-218ENST00000519774 Q8N377 158 aa6.83□□□□□ -1.32
HPS4-218ENST00000519774 RETNLBQ9BQ08 111 aa6.83□□□□□ -1.32
HPS4-218ENST00000519774 KRTAP9-2Q9BYQ4 174 aa6.83□□□□□ -1.32
HPS4-218ENST00000519774 PSMB2P49721 201 aa6.82□□□□□ -1.32
HPS4-218ENST00000519774 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.82□□□□□ -1.32
HPS4-218ENST00000519774 SMIM29Q86T20 159 aa6.82□□□□□ -1.32
HPS4-218ENST00000519774 FAM218AQ96MZ4 157 aa6.82□□□□□ -1.32
HPS4-218ENST00000519774 KRTAP4-12Q9BQ66 201 aa6.82□□□□□ -1.32
HPS4-218ENST00000519774 M0R143 59 aa6.81□□□□□ -1.32
HPS4-218ENST00000519774 SNCGO76070 127 aa6.8□□□□□ -1.32
HPS4-218ENST00000519774 SPINK1P00995 79 aa6.8□□□□□ -1.32
HPS4-218ENST00000519774 KRTAP19-1Q8IUB9 90 aa6.8□□□□□ -1.32
HPS4-218ENST00000519774 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.79□□□□□ -1.32
HPS4-218ENST00000519774 F8WEM9 126 aa6.79□□□□□ -1.32
HPS4-218ENST00000519774 HRCT1Q6UXD1 115 aa6.79□□□□□ -1.32
HPS4-218ENST00000519774 CLEC2BQ92478 149 aa6.79□□□□□ -1.32
HPS4-218ENST00000519774 KRTAP9-6A0A140TA67 174 aa6.78□□□□□ -1.32
HPS4-218ENST00000519774 HMCN2Q8NDA2 5059 aa6.78□□□□□ -1.32
HPS4-218ENST00000519774 UBR4Q5T4S7 5183 aa6.77□□□□□ -1.33
HPS4-218ENST00000519774 COX6CP09669 75 aa6.77□□□□□ -1.33
HPS4-218ENST00000519774 A0A0G2JQZ4 141 aa6.76□□□□□ -1.33
HPS4-218ENST00000519774 A0A1B0GX51 115 aa6.76□□□□□ -1.33
HPS4-218ENST00000519774 BATFQ16520 125 aa6.76□□□□□ -1.33
HPS4-218ENST00000519774 PPDPFLQ8WWR9 84 aa6.76□□□□□ -1.33
HPS4-218ENST00000519774 SNHG12Q9BXW3 62 aa6.76□□□□□ -1.33
HPS4-218ENST00000519774 RPS29P62273 56 aaKnown RBP6.75□□□□□ -1.33
HPS4-218ENST00000519774 OCIAD2Q56VL3 154 aa6.75□□□□□ -1.33
HPS4-218ENST00000519774 DNAL4O96015 105 aa6.74□□□□□ -1.33
HPS4-218ENST00000519774 SCGB1C2P0DMR2 95 aa6.74□□□□□ -1.33
HPS4-218ENST00000519774 NAA38Q9BRA0 125 aaKnown RBP6.73□□□□□ -1.33
HPS4-218ENST00000519774 IGLV7-46A0A075B6I9 117 aa6.72□□□□□ -1.33
HPS4-218ENST00000519774 FABP2P12104 132 aa6.72□□□□□ -1.33
HPS4-218ENST00000519774 LIMD2Q9BT23 127 aa6.72□□□□□ -1.33
HPS4-218ENST00000519774 H3BUT2 72 aa6.71□□□□□ -1.34
HPS4-218ENST00000519774 CD164Q04900 197 aa6.71□□□□□ -1.34
HPS4-218ENST00000519774 Q6JHZ5 121 aa6.71□□□□□ -1.34
HPS4-218ENST00000519774 IGLV8-61A0A075B6I0 122 aa6.7□□□□□ -1.34
HPS4-218ENST00000519774 NDUFV3P56181 108 aaKnown RBP6.7□□□□□ -1.34
HPS4-218ENST00000519774 KRTAP19-4Q3LI73 84 aa6.7□□□□□ -1.34
HPS4-218ENST00000519774 IGFL1Q6UW32 110 aa6.7□□□□□ -1.34
HPS4-218ENST00000519774 ORMDL1Q9P0S3 153 aa6.7□□□□□ -1.34
HPS4-218ENST00000519774 C21orf62-AS1Q17RA5 79 aa6.69□□□□□ -1.34
HPS4-218ENST00000519774 FP248Q71RG6 208 aaPredicted RBP6.69□□□□□ -1.34
HPS4-218ENST00000519774 LST1O00453 97 aa6.68□□□□□ -1.34
HPS4-218ENST00000519774 LCE3BQ5TA77 95 aa6.68□□□□□ -1.34
HPS4-218ENST00000519774 A0A1B0GV72 72 aa6.67□□□□□ -1.34
HPS4-218ENST00000519774 TRACP01848 142 aa6.67□□□□□ -1.34
HPS4-218ENST00000519774 H3BMG7 143 aa6.66□□□□□ -1.34
HPS4-218ENST00000519774 LRP2P98164 4655 aa6.65□□□□□ -1.34
HPS4-218ENST00000519774 H3BQ85 93 aa6.65□□□□□ -1.34
HPS4-218ENST00000519774 TPRXLQ17RH7 258 aa6.65□□□□□ -1.34
HPS4-218ENST00000519774 TRBV7-7A0A0K0K1E9 115 aa6.64□□□□□ -1.35
HPS4-218ENST00000519774 TMEM256-PLSCR3K7ERE1 68 aa6.64□□□□□ -1.35
HPS4-218ENST00000519774 TCL1BO95988 128 aa6.64□□□□□ -1.35
HPS4-218ENST00000519774 ATXN8Q156A1 80 aa6.63□□□□□ -1.35
HPS4-218ENST00000519774 LYRM7Q5U5X0 104 aa6.63□□□□□ -1.35
HPS4-218ENST00000519774 Q5XG85 94 aa6.63□□□□□ -1.35
HPS4-218ENST00000519774 LPAP08519 4548 aa6.62□□□□□ -1.35
HPS4-218ENST00000519774 TAX1BP3O14907 124 aa6.61□□□□□ -1.35
HPS4-218ENST00000519774 KRTAP13-3Q3SY46 172 aa6.61□□□□□ -1.35
HPS4-218ENST00000519774 C9orf118A6NHY6 69 aa6.6□□□□□ -1.35
HPS4-218ENST00000519774 BAALC-AS2P0C853 105 aa6.6□□□□□ -1.35
HPS4-218ENST00000519774 UBE2V1Q13404 147 aa6.6□□□□□ -1.35
HPS4-218ENST00000519774 C1orf195Q5TG92 126 aa6.6□□□□□ -1.35
HPS4-218ENST00000519774 PCP4L1A6NKN8 68 aa6.59□□□□□ -1.35
HPS4-218ENST00000519774 Q6Q795 121 aa6.59□□□□□ -1.35
HPS4-218ENST00000519774 TEN1Q86WV5 123 aa6.59□□□□□ -1.35
HPS4-218ENST00000519774 ANKRD29Q8N6D5 301 aa6.59□□□□□ -1.35
HPS4-218ENST00000519774 TRBV20-1A0A075B6N2 111 aa6.57□□□□□ -1.36
HPS4-218ENST00000519774 A0A1W2PNM2 257 aa6.57□□□□□ -1.36
HPS4-218ENST00000519774 A0A1W2PPM0 123 aa6.57□□□□□ -1.36
HPS4-218ENST00000519774 A0A087WSZ3 146 aa6.56□□□□□ -1.36
HPS4-218ENST00000519774 C9JAW5 83 aa6.56□□□□□ -1.36
HPS4-218ENST00000519774 ASB16-AS1Q495Z4 193 aa6.56□□□□□ -1.36
HPS4-218ENST00000519774 SS18L2Q9UHA2 77 aa6.56□□□□□ -1.36
HPS4-218ENST00000519774 C9orf92A6NGG3 77 aa6.55□□□□□ -1.36
HPS4-218ENST00000519774 RBM3P98179 157 aaKnown RBP6.55□□□□□ -1.36
HPS4-218ENST00000519774 COL5A1-AS1Q5SY13 56 aa6.55□□□□□ -1.36
HPS4-218ENST00000519774 CCKP06307 115 aa6.54□□□□□ -1.36
HPS4-218ENST00000519774 VPS25Q9BRG1 176 aa6.54□□□□□ -1.36
HPS4-218ENST00000519774 TRBV7-4A0A0J9YYF1 115 aa6.53□□□□□ -1.36
HPS4-218ENST00000519774 DSCR8Q96T75 97 aa6.53□□□□□ -1.36
HPS4-218ENST00000519774 MTURNQ8N3F0 131 aa6.52□□□□□ -1.37
HPS4-218ENST00000519774 SPCS1Q9Y6A9 102 aa6.51□□□□□ -1.37
HPS4-218ENST00000519774 JMJD7-PLA2G4BH0Y9G9 81 aa6.5□□□□□ -1.37
HPS4-218ENST00000519774 KRTAP9-9Q9BYP9 154 aa6.49□□□□□ -1.37
HPS4-218ENST00000519774 KRTAP9-4Q9BYQ2 154 aa6.49□□□□□ -1.37
HPS4-218ENST00000519774 H3BT86 120 aa6.48□□□□□ -1.37
HPS4-218ENST00000519774 C14orf132Q9NPU4 83 aa6.48□□□□□ -1.37
HPS4-218ENST00000519774 Q96NJ1 140 aa6.47□□□□□ -1.37
HPS4-218ENST00000519774 SIGMAR1Q99720 223 aa6.47□□□□□ -1.37
HPS4-218ENST00000519774 Q6ZQT0 140 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms