RNA–Protein interactions for RNA: ENST00000518936.5

PCM1-210, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-210ENST00000518936 TMEM256-PLSCR3K7ERE1 68 aa12.66□□□□□ -0.38
PCM1-210ENST00000518936 PRR26Q8N8Z3 221 aa12.66□□□□□ -0.38
PCM1-210ENST00000518936 SSBP3-AS1Q7Z2R9 100 aa12.65□□□□□ -0.38
PCM1-210ENST00000518936 NAA38Q9BRA0 125 aaKnown RBP12.65□□□□□ -0.38
PCM1-210ENST00000518936 ANAPC11Q9NYG5 84 aa12.65□□□□□ -0.38
PCM1-210ENST00000518936 A0A087X002 238 aa12.64□□□□□ -0.39
PCM1-210ENST00000518936 Q8N377 158 aa12.64□□□□□ -0.39
PCM1-210ENST00000518936 LINC01547P58512 204 aaPredicted RBP12.63□□□□□ -0.39
PCM1-210ENST00000518936 C9orf153Q5TBE3 101 aa12.63□□□□□ -0.39
PCM1-210ENST00000518936 Q8NBF4 154 aa12.63□□□□□ -0.39
PCM1-210ENST00000518936 IGLV9-49A0A0B4J1Y8 123 aa12.62□□□□□ -0.39
PCM1-210ENST00000518936 KRTAP10-8P60410 259 aa12.62□□□□□ -0.39
PCM1-210ENST00000518936 TCL1BO95988 128 aa12.61□□□□□ -0.39
PCM1-210ENST00000518936 C4orf48Q5BLP8 95 aa12.59□□□□□ -0.39
PCM1-210ENST00000518936 MOBPQ13875 183 aa12.58□□□□□ -0.4
PCM1-210ENST00000518936 KRTAP13-2Q52LG2 175 aa12.58□□□□□ -0.4
PCM1-210ENST00000518936 SPAG11AQ6PDA7 123 aa12.58□□□□□ -0.4
PCM1-210ENST00000518936 HERC1Q15751 4861 aa12.57□□□□□ -0.4
PCM1-210ENST00000518936 UBE2V1Q13404 147 aa12.56□□□□□ -0.4
PCM1-210ENST00000518936 Q6JHZ5 121 aa12.56□□□□□ -0.4
PCM1-210ENST00000518936 C3orf22Q8N5N4 141 aa12.56□□□□□ -0.4
PCM1-210ENST00000518936 MYCBP2O75592 4640 aa12.56□□□□□ -0.4
PCM1-210ENST00000518936 SMIM29Q86T20 159 aa12.55□□□□□ -0.4
PCM1-210ENST00000518936 SPCS1Q9Y6A9 102 aa12.55□□□□□ -0.4
PCM1-210ENST00000518936 FAT3Q8TDW7 4589 aa12.54□□□□□ -0.4
PCM1-210ENST00000518936 NDUFV3P56181 108 aaKnown RBP12.54□□□□□ -0.4
PCM1-210ENST00000518936 MT1HL1P0DM35 61 aa12.53□□□□□ -0.4
PCM1-210ENST00000518936 LINC00304Q8N9R0 145 aa12.53□□□□□ -0.4
PCM1-210ENST00000518936 BAALC-AS2P0C853 105 aa12.52□□□□□ -0.41
PCM1-210ENST00000518936 GTF2H5Q6ZYL4 71 aa12.52□□□□□ -0.41
PCM1-210ENST00000518936 IGLV8-61A0A075B6I0 122 aa12.51□□□□□ -0.41
PCM1-210ENST00000518936 LRP1Q07954 4544 aaKnown RBP12.5□□□□□ -0.41
PCM1-210ENST00000518936 C9JAW5 83 aa12.48□□□□□ -0.41
PCM1-210ENST00000518936 H3BMG7 143 aa12.48□□□□□ -0.41
PCM1-210ENST00000518936 H3BT86 120 aa12.48□□□□□ -0.41
PCM1-210ENST00000518936 SPINK1P00995 79 aa12.48□□□□□ -0.41
PCM1-210ENST00000518936 CD164Q04900 197 aa12.47□□□□□ -0.41
PCM1-210ENST00000518936 ANKRD29Q8N6D5 301 aa12.47□□□□□ -0.41
PCM1-210ENST00000518936 JMJD7-PLA2G4BH0Y9G9 81 aa12.46□□□□□ -0.41
PCM1-210ENST00000518936 K7EP34 96 aa12.45□□□□□ -0.42
PCM1-210ENST00000518936 RPS29P62273 56 aaKnown RBP12.45□□□□□ -0.42
PCM1-210ENST00000518936 C21orf62-AS1Q17RA5 79 aa12.45□□□□□ -0.42
PCM1-210ENST00000518936 DMBT1Q9UGM3 2413 aaPredicted RBP12.45□□□□□ -0.42
PCM1-210ENST00000518936 TNXBP22105 4242 aa12.44□□□□□ -0.42
PCM1-210ENST00000518936 RBM3P98179 157 aaKnown RBP12.41□□□□□ -0.42
PCM1-210ENST00000518936 LIMD2Q9BT23 127 aa12.41□□□□□ -0.42
PCM1-210ENST00000518936 DSCR8Q96T75 97 aa12.4□□□□□ -0.42
PCM1-210ENST00000518936 PDE6GP18545 87 aa12.38□□□□□ -0.43
PCM1-210ENST00000518936 IGFL1Q6UW32 110 aa12.37□□□□□ -0.43
PCM1-210ENST00000518936 Q6Q795 121 aa12.35□□□□□ -0.43
PCM1-210ENST00000518936 TEN1Q86WV5 123 aa12.35□□□□□ -0.43
PCM1-210ENST00000518936 F8W1H4 67 aa12.33□□□□□ -0.44
PCM1-210ENST00000518936 SS18L2Q9UHA2 77 aa12.31□□□□□ -0.44
PCM1-210ENST00000518936 Q5XG85 94 aa12.3□□□□□ -0.44
PCM1-210ENST00000518936 TRBV7-4A0A0J9YYF1 115 aa12.29□□□□□ -0.44
PCM1-210ENST00000518936 HRCT1Q6UXD1 115 aa12.29□□□□□ -0.44
PCM1-210ENST00000518936 A0A1B0GW54 56 aa12.28□□□□□ -0.44
PCM1-210ENST00000518936 TRBV7-7A0A0K0K1E9 115 aa12.27□□□□□ -0.45
PCM1-210ENST00000518936 LOC110117498A0A087WWA1 95 aa12.26□□□□□ -0.45
PCM1-210ENST00000518936 A0A1B0GV72 72 aa12.26□□□□□ -0.45
PCM1-210ENST00000518936 MTURNQ8N3F0 131 aa12.26□□□□□ -0.45
PCM1-210ENST00000518936 OBSCN-AS1Q96MR7 158 aa12.26□□□□□ -0.45
PCM1-210ENST00000518936 CCKP06307 115 aa12.25□□□□□ -0.45
PCM1-210ENST00000518936 PRO0461Q9UI25 63 aa12.23□□□□□ -0.45
PCM1-210ENST00000518936 FP248Q71RG6 208 aaPredicted RBP12.21□□□□□ -0.45
PCM1-210ENST00000518936 A0A0G2JQZ4 141 aa12.2□□□□□ -0.46
PCM1-210ENST00000518936 ASB16-AS1Q495Z4 193 aa12.2□□□□□ -0.46
PCM1-210ENST00000518936 VPS25Q9BRG1 176 aa12.2□□□□□ -0.46
PCM1-210ENST00000518936 C14orf132Q9NPU4 83 aa12.19□□□□□ -0.46
PCM1-210ENST00000518936 A0A1W2PNM2 257 aa12.18□□□□□ -0.46
PCM1-210ENST00000518936 Q6ZQT0 140 aa12.18□□□□□ -0.46
PCM1-210ENST00000518936 SMCPP49901 116 aaPredicted RBP12.17□□□□□ -0.46
PCM1-210ENST00000518936 A0A087WSZ3 146 aa12.16□□□□□ -0.46
PCM1-210ENST00000518936 A0A1B0GV90 55 aa12.15□□□□□ -0.46
PCM1-210ENST00000518936 PRR4Q16378 134 aa12.13□□□□□ -0.47
PCM1-210ENST00000518936 ETDBQ3ZM63 59 aa12.08□□□□□ -0.48
PCM1-210ENST00000518936 RETNLBQ9BQ08 111 aa12.07□□□□□ -0.48
PCM1-210ENST00000518936 C1orf195Q5TG92 126 aa12.06□□□□□ -0.48
PCM1-210ENST00000518936 IGLV7-46A0A075B6I9 117 aa12.05□□□□□ -0.48
PCM1-210ENST00000518936 UBR4Q5T4S7 5183 aa12□□□□□ -0.49
PCM1-210ENST00000518936 J3KT08 172 aa12□□□□□ -0.49
PCM1-210ENST00000518936 NREPQ16612 68 aa11.99□□□□□ -0.49
PCM1-210ENST00000518936 TPRXLQ17RH7 258 aa11.98□□□□□ -0.49
PCM1-210ENST00000518936 ACYP1P07311 99 aa11.94□□□□□ -0.5
PCM1-210ENST00000518936 UBL5Q9BZL1 73 aa11.94□□□□□ -0.5
PCM1-210ENST00000518936 SIGMAR1Q99720 223 aa11.93□□□□□ -0.5
PCM1-210ENST00000518936 LINC00472Q9H8W2 130 aa11.93□□□□□ -0.5
PCM1-210ENST00000518936 IGKV4-1P06312 121 aa11.92□□□□□ -0.5
PCM1-210ENST00000518936 J3QR89 54 aa11.9□□□□□ -0.5
PCM1-210ENST00000518936 Q96NJ1 140 aa11.9□□□□□ -0.5
PCM1-210ENST00000518936 NDUFB1O75438 58 aa11.89□□□□□ -0.51
PCM1-210ENST00000518936 HMCN2Q8NDA2 5059 aa11.89□□□□□ -0.51
PCM1-210ENST00000518936 FAM240AA0A1B0GVK7 77 aa11.88□□□□□ -0.51
PCM1-210ENST00000518936 CDIP1Q9H305 208 aa11.88□□□□□ -0.51
PCM1-210ENST00000518936 KRTAP13-3Q3SY46 172 aa11.85□□□□□ -0.51
PCM1-210ENST00000518936 Q6ZVQ6 151 aa11.83□□□□□ -0.52
PCM1-210ENST00000518936 BPY2O14599 106 aa11.82□□□□□ -0.52
PCM1-210ENST00000518936 LINC00846Q9NV44 126 aa11.82□□□□□ -0.52
PCM1-210ENST00000518936 DEFB116Q30KQ4 102 aa11.8□□□□□ -0.52
PCM1-210ENST00000518936 A8MWP4 228 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms