RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 FP248Q71RG6 208 aaPredicted RBP12.48□□□□□ -0.41
VEGFA-217ENST00000518538 PPDPFLQ8WWR9 84 aa12.48□□□□□ -0.41
VEGFA-217ENST00000518538 FAM218AQ96MZ4 157 aa12.48□□□□□ -0.41
VEGFA-217ENST00000518538 LOC105371267A0A1B0GV96 52 aa12.47□□□□□ -0.41
VEGFA-217ENST00000518538 TRIAP1O43715 76 aa12.47□□□□□ -0.41
VEGFA-217ENST00000518538 LPAP08519 4548 aa12.46□□□□□ -0.41
VEGFA-217ENST00000518538 F8WEM9 126 aa12.46□□□□□ -0.41
VEGFA-217ENST00000518538 CD164Q04900 197 aa12.46□□□□□ -0.41
VEGFA-217ENST00000518538 HRCT1Q6UXD1 115 aa12.45□□□□□ -0.42
VEGFA-217ENST00000518538 A0A1B0GX51 115 aa12.44□□□□□ -0.42
VEGFA-217ENST00000518538 UBR4Q5T4S7 5183 aa12.43□□□□□ -0.42
VEGFA-217ENST00000518538 TPRXLQ17RH7 258 aa12.43□□□□□ -0.42
VEGFA-217ENST00000518538 OCIAD2Q56VL3 154 aa12.43□□□□□ -0.42
VEGFA-217ENST00000518538 LIMD2Q9BT23 127 aa12.43□□□□□ -0.42
VEGFA-217ENST00000518538 PSMB2P49721 201 aa12.42□□□□□ -0.42
VEGFA-217ENST00000518538 IGLV8-61A0A075B6I0 122 aa12.4□□□□□ -0.42
VEGFA-217ENST00000518538 SNHG12Q9BXW3 62 aa12.4□□□□□ -0.42
VEGFA-217ENST00000518538 A0A0G2JQZ4 141 aa12.39□□□□□ -0.43
VEGFA-217ENST00000518538 COX6CP09669 75 aa12.39□□□□□ -0.43
VEGFA-217ENST00000518538 M0R143 59 aa12.38□□□□□ -0.43
VEGFA-217ENST00000518538 Q6JHZ5 121 aa12.37□□□□□ -0.43
VEGFA-217ENST00000518538 CLEC2BQ92478 149 aa12.37□□□□□ -0.43
VEGFA-217ENST00000518538 TSTD3H0UI37 97 aa12.36□□□□□ -0.43
VEGFA-217ENST00000518538 GHRHP01286 108 aa12.35□□□□□ -0.43
VEGFA-217ENST00000518538 Q5XG85 94 aa12.34□□□□□ -0.43
VEGFA-217ENST00000518538 CDIP1Q9H305 208 aa12.33□□□□□ -0.44
VEGFA-217ENST00000518538 IGFL1Q6UW32 110 aa12.32□□□□□ -0.44
VEGFA-217ENST00000518538 DNAL4O96015 105 aa12.31□□□□□ -0.44
VEGFA-217ENST00000518538 NDUFV3P56181 108 aaKnown RBP12.3□□□□□ -0.44
VEGFA-217ENST00000518538 KRTAP13-3Q3SY46 172 aa12.3□□□□□ -0.44
VEGFA-217ENST00000518538 H3BUT2 72 aa12.29□□□□□ -0.44
VEGFA-217ENST00000518538 SCGB1C2P0DMR2 95 aa12.27□□□□□ -0.45
VEGFA-217ENST00000518538 FABP2P12104 132 aa12.27□□□□□ -0.45
VEGFA-217ENST00000518538 ORMDL1Q9P0S3 153 aa12.27□□□□□ -0.45
VEGFA-217ENST00000518538 H3BQ85 93 aa12.26□□□□□ -0.45
VEGFA-217ENST00000518538 TRBV7-7A0A0K0K1E9 115 aa12.24□□□□□ -0.45
VEGFA-217ENST00000518538 TCL1BO95988 128 aa12.24□□□□□ -0.45
VEGFA-217ENST00000518538 TRACP01848 142 aa12.23□□□□□ -0.45
VEGFA-217ENST00000518538 H3BMG7 143 aa12.22□□□□□ -0.45
VEGFA-217ENST00000518538 LST1O00453 97 aa12.22□□□□□ -0.45
VEGFA-217ENST00000518538 C1orf195Q5TG92 126 aa12.21□□□□□ -0.45
VEGFA-217ENST00000518538 TMEM256-PLSCR3K7ERE1 68 aa12.2□□□□□ -0.46
VEGFA-217ENST00000518538 Q6Q795 121 aa12.18□□□□□ -0.46
VEGFA-217ENST00000518538 BATFQ16520 125 aa12.17□□□□□ -0.46
VEGFA-217ENST00000518538 ASB16-AS1Q495Z4 193 aa12.17□□□□□ -0.46
VEGFA-217ENST00000518538 NAA38Q9BRA0 125 aaKnown RBP12.16□□□□□ -0.46
VEGFA-217ENST00000518538 TEN1Q86WV5 123 aa12.15□□□□□ -0.46
VEGFA-217ENST00000518538 UBE2V1Q13404 147 aa12.14□□□□□ -0.47
VEGFA-217ENST00000518538 ATXN8Q156A1 80 aa12.11□□□□□ -0.47
VEGFA-217ENST00000518538 RNF213Q63HN8 5207 aa12.1□□□□□ -0.47
VEGFA-217ENST00000518538 LYRM7Q5U5X0 104 aa12.09□□□□□ -0.47
VEGFA-217ENST00000518538 ANKRD29Q8N6D5 301 aa12.09□□□□□ -0.47
VEGFA-217ENST00000518538 A0A1B0GV72 72 aa12.08□□□□□ -0.48
VEGFA-217ENST00000518538 XP32Q5T750 250 aa12.08□□□□□ -0.48
VEGFA-217ENST00000518538 SS18L2Q9UHA2 77 aa12.08□□□□□ -0.48
VEGFA-217ENST00000518538 A0A1W2PNM2 257 aa12.06□□□□□ -0.48
VEGFA-217ENST00000518538 C9orf92A6NGG3 77 aa12.06□□□□□ -0.48
VEGFA-217ENST00000518538 BAALC-AS2P0C853 105 aa12.06□□□□□ -0.48
VEGFA-217ENST00000518538 A0A087WSZ3 146 aa12.05□□□□□ -0.48
VEGFA-217ENST00000518538 TRBV20-1A0A075B6N2 111 aa12.02□□□□□ -0.49
VEGFA-217ENST00000518538 TRBV7-4A0A0J9YYF1 115 aa12.02□□□□□ -0.49
VEGFA-217ENST00000518538 SEC61BP60468 96 aaKnown RBP12.02□□□□□ -0.49
VEGFA-217ENST00000518538 C9orf118A6NHY6 69 aa12.01□□□□□ -0.49
VEGFA-217ENST00000518538 TAX1BP3O14907 124 aa12□□□□□ -0.49
VEGFA-217ENST00000518538 RBM3P98179 157 aaKnown RBP12□□□□□ -0.49
VEGFA-217ENST00000518538 MUC17Q685J3 4493 aa11.99□□□□□ -0.49
VEGFA-217ENST00000518538 CCKP06307 115 aa11.98□□□□□ -0.49
VEGFA-217ENST00000518538 DSCR8Q96T75 97 aa11.97□□□□□ -0.49
VEGFA-217ENST00000518538 A0A1W2PPM0 123 aa11.94□□□□□ -0.5
VEGFA-217ENST00000518538 C9JAW5 83 aa11.93□□□□□ -0.5
VEGFA-217ENST00000518538 Q96NJ1 140 aa11.93□□□□□ -0.5
VEGFA-217ENST00000518538 JMJD7-PLA2G4BH0Y9G9 81 aa11.91□□□□□ -0.5
VEGFA-217ENST00000518538 MUC2Q02817 5179 aa11.9□□□□□ -0.5
VEGFA-217ENST00000518538 VPS25Q9BRG1 176 aa11.9□□□□□ -0.5
VEGFA-217ENST00000518538 A0A0U1RQV1 116 aa11.88□□□□□ -0.51
VEGFA-217ENST00000518538 COL5A1-AS1Q5SY13 56 aa11.86□□□□□ -0.51
VEGFA-217ENST00000518538 OBSCN-AS1Q96MR7 158 aa11.85□□□□□ -0.51
VEGFA-217ENST00000518538 RPL37P61927 97 aaKnown RBP11.84□□□□□ -0.51
VEGFA-217ENST00000518538 PCOTHQ58A44 107 aa11.84□□□□□ -0.51
VEGFA-217ENST00000518538 LOC110117498A0A087WWA1 95 aa11.83□□□□□ -0.52
VEGFA-217ENST00000518538 H3BT86 120 aa11.83□□□□□ -0.52
VEGFA-217ENST00000518538 C21orf62-AS1Q17RA5 79 aa11.83□□□□□ -0.52
VEGFA-217ENST00000518538 Q6ZQT0 140 aa11.83□□□□□ -0.52
VEGFA-217ENST00000518538 KRTAP4-1Q9BYQ7 146 aa11.83□□□□□ -0.52
VEGFA-217ENST00000518538 SIGMAR1Q99720 223 aa11.82□□□□□ -0.52
VEGFA-217ENST00000518538 LINC00472Q9H8W2 130 aa11.82□□□□□ -0.52
VEGFA-217ENST00000518538 IGKV4-1P06312 121 aa11.81□□□□□ -0.52
VEGFA-217ENST00000518538 PDE6GP18545 87 aa11.81□□□□□ -0.52
VEGFA-217ENST00000518538 SPCS1Q9Y6A9 102 aa11.81□□□□□ -0.52
VEGFA-217ENST00000518538 C14orf132Q9NPU4 83 aa11.8□□□□□ -0.52
VEGFA-217ENST00000518538 MTURNQ8N3F0 131 aa11.78□□□□□ -0.52
VEGFA-217ENST00000518538 A0A1B0GW54 56 aa11.77□□□□□ -0.53
VEGFA-217ENST00000518538 PCP4L1A6NKN8 68 aa11.77□□□□□ -0.53
VEGFA-217ENST00000518538 DEFB116Q30KQ4 102 aa11.76□□□□□ -0.53
VEGFA-217ENST00000518538 Q75L30 129 aa11.75□□□□□ -0.53
VEGFA-217ENST00000518538 DSCR10P59022 87 aa11.72□□□□□ -0.53
VEGFA-217ENST00000518538 C20orf166-AS1Q96NR2 134 aa11.69□□□□□ -0.54
VEGFA-217ENST00000518538 J3KT08 172 aa11.68□□□□□ -0.54
VEGFA-217ENST00000518538 LINC00313P59037 77 aa11.68□□□□□ -0.54
VEGFA-217ENST00000518538 K7EP34 96 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms