RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 CYSTM1Q9H1C7 97 aa14.55□□□□□ -0.08
SLIT3-204ENST00000518140 DEFB105AQ8NG35 78 aa14.54□□□□□ -0.08
SLIT3-204ENST00000518140 ST20-AS1Q8NBB2 130 aa14.54□□□□□ -0.08
SLIT3-204ENST00000518140 LCE6AA0A183 80 aa14.52□□□□□ -0.09
SLIT3-204ENST00000518140 LINC01547P58512 204 aaPredicted RBP14.51□□□□□ -0.09
SLIT3-204ENST00000518140 DNAH8Q96JB1 4490 aa14.51□□□□□ -0.09
SLIT3-204ENST00000518140 Q6ZVQ6 151 aa14.5□□□□□ -0.09
SLIT3-204ENST00000518140 Q8N377 158 aa14.5□□□□□ -0.09
SLIT3-204ENST00000518140 PLAC8Q9NZF1 115 aa14.5□□□□□ -0.09
SLIT3-204ENST00000518140 TMEM258P61165 79 aa14.5□□□□□ -0.09
SLIT3-204ENST00000518140 FAM30AQ9NZY2 134 aa14.49□□□□□ -0.09
SLIT3-204ENST00000518140 TRBV7-4A0A0J9YYF1 115 aa14.48□□□□□ -0.09
SLIT3-204ENST00000518140 J3KT08 172 aa14.48□□□□□ -0.09
SLIT3-204ENST00000518140 SRRM2Q9UQ35 2752 aaKnown RBP14.47□□□□□ -0.09
SLIT3-204ENST00000518140 BCE1O60756 84 aa14.46□□□□□ -0.09
SLIT3-204ENST00000518140 RPS28P62857 69 aaKnown RBP14.46□□□□□ -0.09
SLIT3-204ENST00000518140 HAMPP81172 84 aa14.45□□□□□ -0.1
SLIT3-204ENST00000518140 HIGD2AQ9BW72 106 aa14.45□□□□□ -0.1
SLIT3-204ENST00000518140 CXCL6P80162 114 aa14.45□□□□□ -0.1
SLIT3-204ENST00000518140 KRTAP10-1P60331 282 aa14.43□□□□□ -0.1
SLIT3-204ENST00000518140 IGLV5-48A0A075B6I7 105 aa14.41□□□□□ -0.1
SLIT3-204ENST00000518140 UBE2AP49459 152 aa14.4□□□□□ -0.1
SLIT3-204ENST00000518140 H0Y9J4 135 aa14.38□□□□□ -0.11
SLIT3-204ENST00000518140 KRTAP13-1Q8IUC0 172 aa14.38□□□□□ -0.11
SLIT3-204ENST00000518140 PSORS1C2Q9UIG4 136 aa14.38□□□□□ -0.11
SLIT3-204ENST00000518140 CIRBP-AS1Q8TBR5 109 aa14.37□□□□□ -0.11
SLIT3-204ENST00000518140 TRAV7A0A075B6U4 112 aa14.37□□□□□ -0.11
SLIT3-204ENST00000518140 KMT2CQ8NEZ4 4911 aaKnown RBP14.37□□□□□ -0.11
SLIT3-204ENST00000518140 Q6ZSA8 131 aa14.34□□□□□ -0.11
SLIT3-204ENST00000518140 SMIM29Q86T20 159 aa14.33□□□□□ -0.12
SLIT3-204ENST00000518140 C20orf197Q8N268 126 aa14.33□□□□□ -0.12
SLIT3-204ENST00000518140 RYR2Q92736 4967 aa14.32□□□□□ -0.12
SLIT3-204ENST00000518140 SCXQ7RTU7 201 aa14.32□□□□□ -0.12
SLIT3-204ENST00000518140 PKHD1P08F94 4074 aa14.32□□□□□ -0.12
SLIT3-204ENST00000518140 C1orf137Q5JT78 98 aa14.3□□□□□ -0.12
SLIT3-204ENST00000518140 LINC00336Q6ZUF6 198 aa14.26□□□□□ -0.13
SLIT3-204ENST00000518140 LRP1BQ9NZR2 4599 aa14.25□□□□□ -0.13
SLIT3-204ENST00000518140 KLKP1Q107X0 134 aa14.22□□□□□ -0.13
SLIT3-204ENST00000518140 A0A1B0GVY2 172 aa14.21□□□□□ -0.13
SLIT3-204ENST00000518140 A0A0G2JQZ4 141 aa14.21□□□□□ -0.14
SLIT3-204ENST00000518140 OXTP01178 125 aa14.2□□□□□ -0.14
SLIT3-204ENST00000518140 H7BZZ5 65 aa14.19□□□□□ -0.14
SLIT3-204ENST00000518140 SPRR1BP22528 89 aa14.19□□□□□ -0.14
SLIT3-204ENST00000518140 ZNF861PO60384 105 aa14.19□□□□□ -0.14
SLIT3-204ENST00000518140 NREPQ16612 68 aa14.18□□□□□ -0.14
SLIT3-204ENST00000518140 FAM236DA0A1B0GTK5 79 aa14.18□□□□□ -0.14
SLIT3-204ENST00000518140 FAM236CP0DP71 79 aa14.18□□□□□ -0.14
SLIT3-204ENST00000518140 IGLV7-43P04211 117 aa14.16□□□□□ -0.14
SLIT3-204ENST00000518140 A0A1W2PNM2 257 aa14.15□□□□□ -0.14
SLIT3-204ENST00000518140 SPRR4Q96PI1 79 aa14.14□□□□□ -0.15
SLIT3-204ENST00000518140 DYNC1H1Q14204 4646 aaKnown RBP14.14□□□□□ -0.15
SLIT3-204ENST00000518140 F8WEM9 126 aa14.14□□□□□ -0.15
SLIT3-204ENST00000518140 IGKV4-1P06312 121 aa14.13□□□□□ -0.15
SLIT3-204ENST00000518140 BPY2O14599 106 aa14.13□□□□□ -0.15
SLIT3-204ENST00000518140 SNURFQ9Y675 71 aa14.12□□□□□ -0.15
SLIT3-204ENST00000518140 A0A1B0GW54 56 aa14.11□□□□□ -0.15
SLIT3-204ENST00000518140 IGFL1Q6UW32 110 aa14.11□□□□□ -0.15
SLIT3-204ENST00000518140 ANAPC11Q9NYG5 84 aa14.11□□□□□ -0.15
SLIT3-204ENST00000518140 IGLV8-61A0A075B6I0 122 aa14.1□□□□□ -0.15
SLIT3-204ENST00000518140 Q8N9L7 120 aa14.1□□□□□ -0.15
SLIT3-204ENST00000518140 NDUFC1O43677 76 aa14.07□□□□□ -0.16
SLIT3-204ENST00000518140 Q8NBF4 154 aa14.07□□□□□ -0.16
SLIT3-204ENST00000518140 VPS13BQ7Z7G8 4022 aa14.07□□□□□ -0.16
SLIT3-204ENST00000518140 LINC00483Q53H64 154 aa14.06□□□□□ -0.16
SLIT3-204ENST00000518140 SERP1Q9Y6X1 66 aa14.06□□□□□ -0.16
SLIT3-204ENST00000518140 C5orf47Q569G3 176 aa14.03□□□□□ -0.16
SLIT3-204ENST00000518140 ZNF706Q9Y5V0 76 aaPredicted RBP14.03□□□□□ -0.16
SLIT3-204ENST00000518140 RYR3Q15413 4870 aa14.02□□□□□ -0.16
SLIT3-204ENST00000518140 IGLV9-49A0A0B4J1Y8 123 aa14.02□□□□□ -0.16
SLIT3-204ENST00000518140 Q5XG85 94 aa14.02□□□□□ -0.17
SLIT3-204ENST00000518140 TMEM254Q8TBM7 123 aa14.01□□□□□ -0.17
SLIT3-204ENST00000518140 OCR1Q9BZK8 76 aa14.01□□□□□ -0.17
SLIT3-204ENST00000518140 APOBP04114 4563 aaKnown RBP13.96□□□□□ -0.17
SLIT3-204ENST00000518140 C4orf26Q17RF5 130 aa13.95□□□□□ -0.18
SLIT3-204ENST00000518140 SMR3BP02814 79 aaPredicted RBP13.95□□□□□ -0.18
SLIT3-204ENST00000518140 ATP5EP56381 51 aaPredicted RBP13.95□□□□□ -0.18
SLIT3-204ENST00000518140 A0A0U1RQV1 116 aa13.92□□□□□ -0.18
SLIT3-204ENST00000518140 MOBPQ13875 183 aa13.91□□□□□ -0.18
SLIT3-204ENST00000518140 A0A087WSZ3 146 aa13.89□□□□□ -0.19
SLIT3-204ENST00000518140 HRCT1Q6UXD1 115 aa13.86□□□□□ -0.19
SLIT3-204ENST00000518140 FAT1Q14517 4588 aa13.85□□□□□ -0.19
SLIT3-204ENST00000518140 DSCR10P59022 87 aa13.85□□□□□ -0.19
SLIT3-204ENST00000518140 RPL37AP61513 92 aaKnown RBP13.85□□□□□ -0.19
SLIT3-204ENST00000518140 SMIM26A0A096LP01 95 aa13.84□□□□□ -0.19
SLIT3-204ENST00000518140 A0A087X002 238 aa13.82□□□□□ -0.2
SLIT3-204ENST00000518140 KRTAP1-4P0C5Y4 121 aa13.8□□□□□ -0.2
SLIT3-204ENST00000518140 DEFB116Q30KQ4 102 aa13.8□□□□□ -0.2
SLIT3-204ENST00000518140 K7EQZ3 153 aa13.78□□□□□ -0.2
SLIT3-204ENST00000518140 KRTAP13-2Q52LG2 175 aa13.77□□□□□ -0.21
SLIT3-204ENST00000518140 FP248Q71RG6 208 aaPredicted RBP13.76□□□□□ -0.21
SLIT3-204ENST00000518140 KRTAP10-4P60372 401 aaPredicted RBP13.75□□□□□ -0.21
SLIT3-204ENST00000518140 HCG22E2RYF7 251 aa13.71□□□□□ -0.21
SLIT3-204ENST00000518140 SPINK6Q6UWN8 80 aa13.71□□□□□ -0.21
SLIT3-204ENST00000518140 FAM229BQ4G0N7 80 aa13.7□□□□□ -0.22
SLIT3-204ENST00000518140 PLA2G1BP04054 148 aaKnown RBP13.69□□□□□ -0.22
SLIT3-204ENST00000518140 SSBP3-AS1Q7Z2R9 100 aa13.69□□□□□ -0.22
SLIT3-204ENST00000518140 LINC00472Q9H8W2 130 aa13.69□□□□□ -0.22
SLIT3-204ENST00000518140 ZCCHC13Q8WW36 166 aaKnown RBP13.67□□□□□ -0.22
SLIT3-204ENST00000518140 HSPG2P98160 4391 aa13.63□□□□□ -0.23
SLIT3-204ENST00000518140 Q96NJ1 140 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms