RNA–Protein interactions for RNA: ENST00000516881.1

SCARNA15-202, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-202ENST00000516881 ARHGAP5Q13017 1502 aa-2.93□□□□□ -2.88
SCARNA15-202ENST00000516881 ABCC2Q92887 1545 aa-2.93□□□□□ -2.88
SCARNA15-202ENST00000516881 CSMD2Q7Z408 3487 aa-2.94□□□□□ -2.88
SCARNA15-202ENST00000516881 SNAPC5O75971 98 aa-2.94□□□□□ -2.88
SCARNA15-202ENST00000516881 TIMM8BQ9Y5J9 83 aaPredicted RBP-2.94□□□□□ -2.88
SCARNA15-202ENST00000516881 CHD1O14646 1710 aa-2.95□□□□□ -2.88
SCARNA15-202ENST00000516881 ALKAL2Q6UX46 152 aa-2.95□□□□□ -2.88
SCARNA15-202ENST00000516881 TRGV9Q99603 122 aa-2.95□□□□□ -2.88
SCARNA15-202ENST00000516881 PAIP2BQ9ULR5 123 aaKnown RBP-2.95□□□□□ -2.88
SCARNA15-202ENST00000516881 NESP48681 1621 aa-2.96□□□□□ -2.88
SCARNA15-202ENST00000516881 LYNX1G3V0Z9 82 aa-2.96□□□□□ -2.88
SCARNA15-202ENST00000516881 IQCF6A8MYZ5 107 aa-2.97□□□□□ -2.88
SCARNA15-202ENST00000516881 MLH3Q9UHC1 1453 aa-2.97□□□□□ -2.89
SCARNA15-202ENST00000516881 ANKRD36BQ8N2N9 1353 aa-2.98□□□□□ -2.89
SCARNA15-202ENST00000516881 H3BQ15 152 aa-2.98□□□□□ -2.89
SCARNA15-202ENST00000516881 NDUFC1O43677 76 aa-2.98□□□□□ -2.89
SCARNA15-202ENST00000516881 HMGN3Q15651 99 aa-2.98□□□□□ -2.89
SCARNA15-202ENST00000516881 ETDBQ3ZM63 59 aa-2.98□□□□□ -2.89
SCARNA15-202ENST00000516881 CC2D2AQ9P2K1 1620 aa-2.98□□□□□ -2.89
SCARNA15-202ENST00000516881 RAPGEF2Q9Y4G8 1499 aa-2.98□□□□□ -2.89
SCARNA15-202ENST00000516881 FREM2Q5SZK8 3169 aa-2.98□□□□□ -2.89
SCARNA15-202ENST00000516881 TEX14Q8IWB6 1497 aa-2.99□□□□□ -2.89
SCARNA15-202ENST00000516881 IGLV5-48A0A075B6I7 105 aa-3□□□□□ -2.89
SCARNA15-202ENST00000516881 MPC2O95563 127 aa-3□□□□□ -2.89
SCARNA15-202ENST00000516881 TOGARAM1Q9Y4F4 1720 aa-3□□□□□ -2.89
SCARNA15-202ENST00000516881 NWD1Q149M9 1564 aa-3□□□□□ -2.89
SCARNA15-202ENST00000516881 ZNF720Q7Z2F6 126 aa-3.01□□□□□ -2.89
SCARNA15-202ENST00000516881 MYOM2P54296 1465 aa-3.02□□□□□ -2.89
SCARNA15-202ENST00000516881 A0A1B0GUT8 65 aa-3.02□□□□□ -2.89
SCARNA15-202ENST00000516881 RGPD1P0DJD0 1748 aa-3.02□□□□□ -2.89
SCARNA15-202ENST00000516881 NRXN1Q9ULB1 1477 aa-3.03□□□□□ -2.89
SCARNA15-202ENST00000516881 FYCO1Q9BQS8 1478 aa-3.03□□□□□ -2.9
SCARNA15-202ENST00000516881 SUPT6HQ7KZ85 1726 aaKnown RBP-3.04□□□□□ -2.9
SCARNA15-202ENST00000516881 PARP4Q9UKK3 1724 aaKnown RBP-3.04□□□□□ -2.9
SCARNA15-202ENST00000516881 DEFB4AO15263 64 aa-3.04□□□□□ -2.9
SCARNA15-202ENST00000516881 SPHKAPQ2M3C7 1700 aa-3.05□□□□□ -2.9
SCARNA15-202ENST00000516881 GNGT2O14610 69 aa-3.06□□□□□ -2.9
SCARNA15-202ENST00000516881 NRKQ7Z2Y5 1582 aa-3.06□□□□□ -2.9
SCARNA15-202ENST00000516881 IER3IP1Q9Y5U9 82 aa-3.06□□□□□ -2.9
SCARNA15-202ENST00000516881 PRUNE2Q8WUY3 3088 aa-3.06□□□□□ -2.9
SCARNA15-202ENST00000516881 BAZ1AQ9NRL2 1556 aaPredicted RBP-3.07□□□□□ -2.9
SCARNA15-202ENST00000516881 MYH4Q9Y623 1939 aa-3.07□□□□□ -2.9
SCARNA15-202ENST00000516881 POLR1AO95602 1720 aaPredicted RBP-3.07□□□□□ -2.9
SCARNA15-202ENST00000516881 ABCA3Q99758 1704 aa-3.07□□□□□ -2.9
SCARNA15-202ENST00000516881 TRAV21A0A0B4J279 112 aa-3.08□□□□□ -2.9
SCARNA15-202ENST00000516881 LINC01546A6NGU7 62 aa-3.08□□□□□ -2.9
SCARNA15-202ENST00000516881 PLIN4Q96Q06 1357 aa-3.09□□□□□ -2.9
SCARNA15-202ENST00000516881 LCE6AA0A183 80 aa-3.09□□□□□ -2.9
SCARNA15-202ENST00000516881 ACYP1P07311 99 aa-3.09□□□□□ -2.9
SCARNA15-202ENST00000516881 PPP3R1P63098 170 aa-3.09□□□□□ -2.9
SCARNA15-202ENST00000516881 WT1-ASQ06250 92 aa-3.09□□□□□ -2.9
SCARNA15-202ENST00000516881 LY75O60449 1722 aa-3.1□□□□□ -2.91
SCARNA15-202ENST00000516881 CYB5AP00167 134 aa-3.1□□□□□ -2.91
SCARNA15-202ENST00000516881 PLGLAQ15195 96 aa-3.1□□□□□ -2.91
SCARNA15-202ENST00000516881 PMCHL2Q9BQD1 86 aa-3.11□□□□□ -2.91
SCARNA15-202ENST00000516881 DOT1LQ8TEK3 1739 aa-3.11□□□□□ -2.91
SCARNA15-202ENST00000516881 PRDM15P57071 1507 aaPredicted RBP-3.12□□□□□ -2.91
SCARNA15-202ENST00000516881 GNG4P50150 75 aa-3.12□□□□□ -2.91
SCARNA15-202ENST00000516881 CCDC58Q4VC31 144 aa-3.12□□□□□ -2.91
SCARNA15-202ENST00000516881 LTN1O94822 1766 aa-3.12□□□□□ -2.91
SCARNA15-202ENST00000516881 EIF4G3O43432 1585 aaKnown RBP-3.12□□□□□ -2.91
SCARNA15-202ENST00000516881 ZFHX4Q86UP3 3567 aa-3.13□□□□□ -2.91
SCARNA15-202ENST00000516881 ROCK2O75116 1388 aaKnown RBP-3.13□□□□□ -2.91
SCARNA15-202ENST00000516881 UQCRHLA0A096LP55 91 aa-3.14□□□□□ -2.91
SCARNA15-202ENST00000516881 S100PP25815 95 aa-3.14□□□□□ -2.91
SCARNA15-202ENST00000516881 CRYBG3Q68DQ2 2970 aa-3.15□□□□□ -2.91
SCARNA15-202ENST00000516881 MAST1Q9Y2H9 1570 aa-3.15□□□□□ -2.91
SCARNA15-202ENST00000516881 ATOX1O00244 68 aa-3.15□□□□□ -2.91
SCARNA15-202ENST00000516881 NDUFA2O43678 99 aa-3.15□□□□□ -2.91
SCARNA15-202ENST00000516881 DDX60LQ5H9U9 1706 aaKnown RBP-3.16□□□□□ -2.91
SCARNA15-202ENST00000516881 COL5A1-AS1Q5SY13 56 aa-3.16□□□□□ -2.92
SCARNA15-202ENST00000516881 NOP10Q9NPE3 64 aaKnown RBP-3.16□□□□□ -2.92
SCARNA15-202ENST00000516881 PZPP20742 1482 aa-3.16□□□□□ -2.92
SCARNA15-202ENST00000516881 NALCNQ8IZF0 1738 aa-3.18□□□□□ -2.92
SCARNA15-202ENST00000516881 S100A1P23297 94 aa-3.18□□□□□ -2.92
SCARNA15-202ENST00000516881 TSC22D3Q99576 134 aa-3.18□□□□□ -2.92
SCARNA15-202ENST00000516881 CLTCQ00610 1675 aaKnown RBP-3.18□□□□□ -2.92
SCARNA15-202ENST00000516881 ITSN2Q9NZM3 1697 aa-3.18□□□□□ -2.92
SCARNA15-202ENST00000516881 CCNB3Q8WWL7 1395 aa-3.2□□□□□ -2.92
SCARNA15-202ENST00000516881 GTF2H5Q6ZYL4 71 aa-3.2□□□□□ -2.92
SCARNA15-202ENST00000516881 KIAA0586Q9BVV6 1533 aa-3.2□□□□□ -2.92
SCARNA15-202ENST00000516881 KIF1AQ12756 1690 aa-3.2□□□□□ -2.92
SCARNA15-202ENST00000516881 NDUFB1O75438 58 aa-3.21□□□□□ -2.92
SCARNA15-202ENST00000516881 HMGN2P05204 90 aaKnown RBP-3.21□□□□□ -2.92
SCARNA15-202ENST00000516881 FAUP35544 74 aaKnown RBP-3.21□□□□□ -2.92
SCARNA15-202ENST00000516881 BVES-AS1Q5T3Y7 98 aa-3.21□□□□□ -2.92
SCARNA15-202ENST00000516881 TMEM203Q969S6 136 aa-3.21□□□□□ -2.92
SCARNA15-202ENST00000516881 MT-ATP8P03928 68 aa-3.22□□□□□ -2.92
SCARNA15-202ENST00000516881 IFI27P40305 119 aaPredicted RBP-3.22□□□□□ -2.92
SCARNA15-202ENST00000516881 KRTAP19-6Q3LI70 58 aa-3.22□□□□□ -2.92
SCARNA15-202ENST00000516881 LOC105371267A0A1B0GV96 52 aa-3.23□□□□□ -2.93
SCARNA15-202ENST00000516881 CORTO00230 105 aa-3.23□□□□□ -2.93
SCARNA15-202ENST00000516881 SPART-AS1P0CW21 52 aa-3.23□□□□□ -2.93
SCARNA15-202ENST00000516881 ITSN1Q15811 1721 aa-3.23□□□□□ -2.93
SCARNA15-202ENST00000516881 RPL13AP3Q6NVV1 102 aa-3.23□□□□□ -2.93
SCARNA15-202ENST00000516881 TMEM131LA2VDJ0 1609 aa-3.23□□□□□ -2.93
SCARNA15-202ENST00000516881 CFAP54Q96N23 3096 aa-3.23□□□□□ -2.93
SCARNA15-202ENST00000516881 SMARCA2P51531 1590 aa-3.24□□□□□ -2.93
SCARNA15-202ENST00000516881 H3BUA1 57 aa-3.24□□□□□ -2.93
SCARNA15-202ENST00000516881 RPS27P42677 84 aaKnown RBP-3.24□□□□□ -2.93
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms