RNA–Protein interactions for RNA: ENST00000516584.1

RNU6-1004P-201, Transcript of RNA, U6 small nuclear 1004, pseudogene, humanhuman

BASIC

Gene RNU6-1004P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1004P-201ENST00000516584 EIF2AK4Q9P2K8 1649 aaKnown RBP0.35□□□□□ -2.35
RNU6-1004P-201ENST00000516584 COL12A1Q99715 3063 aa0.35□□□□□ -2.35
RNU6-1004P-201ENST00000516584 FAT3Q8TDW7 4589 aa0.35□□□□□ -2.35
RNU6-1004P-201ENST00000516584 DEFB135Q30KP9 77 aa0.35□□□□□ -2.35
RNU6-1004P-201ENST00000516584 FLNBO75369 2602 aaKnown RBP0.35□□□□□ -2.35
RNU6-1004P-201ENST00000516584 UBR5O95071 2799 aaPredicted RBP0.35□□□□□ -2.35
RNU6-1004P-201ENST00000516584 ITPR1Q14643 2758 aa0.35□□□□□ -2.35
RNU6-1004P-201ENST00000516584 DIP2AQ14689 1571 aa0.35□□□□□ -2.35
RNU6-1004P-201ENST00000516584 CDC42BPGQ6DT37 1551 aa0.35□□□□□ -2.35
RNU6-1004P-201ENST00000516584 SONP18583 2426 aaKnown RBP0.35□□□□□ -2.35
RNU6-1004P-201ENST00000516584 CREBBPQ92793 2442 aa0.35□□□□□ -2.35
RNU6-1004P-201ENST00000516584 LAMA2P24043 3122 aaKnown RBP0.35□□□□□ -2.35
RNU6-1004P-201ENST00000516584 RALGAPBQ86X10 1494 aa0.35□□□□□ -2.35
RNU6-1004P-201ENST00000516584 CCDC168Q8NDH2 2452 aa0.35□□□□□ -2.35
RNU6-1004P-201ENST00000516584 MYO9AB2RTY4 2548 aa0.34□□□□□ -2.35
RNU6-1004P-201ENST00000516584 AKAP13Q12802 2813 aa0.34□□□□□ -2.35
RNU6-1004P-201ENST00000516584 FLNAP21333 2647 aaKnown RBP0.34□□□□□ -2.36
RNU6-1004P-201ENST00000516584 DDX60LQ5H9U9 1706 aaKnown RBP0.34□□□□□ -2.36
RNU6-1004P-201ENST00000516584 UBL5Q9BZL1 73 aa0.34□□□□□ -2.36
RNU6-1004P-201ENST00000516584 TENM2Q9NT68 2774 aa0.34□□□□□ -2.36
RNU6-1004P-201ENST00000516584 TNXBP22105 4242 aa0.33□□□□□ -2.36
RNU6-1004P-201ENST00000516584 CSPG4Q6UVK1 2322 aa0.33□□□□□ -2.36
RNU6-1004P-201ENST00000516584 USH2AO75445 5202 aa0.33□□□□□ -2.36
RNU6-1004P-201ENST00000516584 PKD1L1Q8TDX9 2849 aa0.33□□□□□ -2.36
RNU6-1004P-201ENST00000516584 ANKRD11Q6UB99 2663 aaPredicted RBP0.33□□□□□ -2.36
RNU6-1004P-201ENST00000516584 CSMD1Q96PZ7 3565 aa0.33□□□□□ -2.36
RNU6-1004P-201ENST00000516584 HIVEP3Q5T1R4 2406 aa0.33□□□□□ -2.36
RNU6-1004P-201ENST00000516584 HFM1A2PYH4 1435 aa0.33□□□□□ -2.36
RNU6-1004P-201ENST00000516584 SPRR2DP22532 72 aa0.33□□□□□ -2.36
RNU6-1004P-201ENST00000516584 MXRA5Q9NR99 2828 aa0.33□□□□□ -2.36
RNU6-1004P-201ENST00000516584 EYSQ5T1H1 3165 aa0.33□□□□□ -2.36
RNU6-1004P-201ENST00000516584 LRRK2Q5S007 2527 aa0.33□□□□□ -2.36
RNU6-1004P-201ENST00000516584 SZT2Q5T011 3432 aa0.33□□□□□ -2.36
RNU6-1004P-201ENST00000516584 CELSR1Q9NYQ6 3014 aa0.32□□□□□ -2.36
RNU6-1004P-201ENST00000516584 ADAMTS12P58397 1594 aa0.32□□□□□ -2.36
RNU6-1004P-201ENST00000516584 STAB2Q8WWQ8 2551 aa0.32□□□□□ -2.36
RNU6-1004P-201ENST00000516584 MUC12Q9UKN1 5478 aa0.32□□□□□ -2.36
RNU6-1004P-201ENST00000516584 GCN1Q92616 2671 aaKnown RBP0.32□□□□□ -2.36
RNU6-1004P-201ENST00000516584 ASXL1Q8IXJ9 1541 aa0.32□□□□□ -2.36
RNU6-1004P-201ENST00000516584 SPEGQ15772 3267 aa0.32□□□□□ -2.36
RNU6-1004P-201ENST00000516584 HRNRQ86YZ3 2850 aaPredicted RBP0.31□□□□□ -2.36
RNU6-1004P-201ENST00000516584 PRRC2CQ9Y520 2896 aaKnown RBP0.31□□□□□ -2.36
RNU6-1004P-201ENST00000516584 CFAP47Q6ZTR5 3102 aa0.31□□□□□ -2.36
RNU6-1004P-201ENST00000516584 DEFB131BA0A096LNP1 70 aa0.31□□□□□ -2.36
RNU6-1004P-201ENST00000516584 H0YAA0 97 aa0.31□□□□□ -2.36
RNU6-1004P-201ENST00000516584 VCANP13611 3396 aa0.31□□□□□ -2.36
RNU6-1004P-201ENST00000516584 FLNCQ14315 2725 aa0.31□□□□□ -2.36
RNU6-1004P-201ENST00000516584 FASNP49327 2511 aaKnown RBP0.31□□□□□ -2.36
RNU6-1004P-201ENST00000516584 DNMBPQ6XZF7 1577 aa0.31□□□□□ -2.36
RNU6-1004P-201ENST00000516584 IGSF10Q6WRI0 2623 aa0.31□□□□□ -2.36
RNU6-1004P-201ENST00000516584 CICQ96RK0 1608 aaPredicted RBP0.31□□□□□ -2.36
RNU6-1004P-201ENST00000516584 HIVEP1P15822 2718 aa0.3□□□□□ -2.36
RNU6-1004P-201ENST00000516584 MRPL33O75394 65 aaKnown RBP0.3□□□□□ -2.36
RNU6-1004P-201ENST00000516584 KRTAP20-1Q3LI63 56 aa0.3□□□□□ -2.36
RNU6-1004P-201ENST00000516584 KCNQ1DNQ9H478 68 aa0.3□□□□□ -2.36
RNU6-1004P-201ENST00000516584 EP400Q96L91 3159 aa0.3□□□□□ -2.36
RNU6-1004P-201ENST00000516584 DSPP15924 2871 aaKnown RBP0.3□□□□□ -2.36
RNU6-1004P-201ENST00000516584 USP9YO00507 2555 aaPredicted RBP0.3□□□□□ -2.36
RNU6-1004P-201ENST00000516584 NBEAQ8NFP9 2946 aa0.3□□□□□ -2.36
RNU6-1004P-201ENST00000516584 UTP20O75691 2785 aaKnown RBP0.29□□□□□ -2.36
RNU6-1004P-201ENST00000516584 UNC80Q8N2C7 3258 aa0.29□□□□□ -2.36
RNU6-1004P-201ENST00000516584 ABCA9Q8IUA7 1624 aa0.29□□□□□ -2.36
RNU6-1004P-201ENST00000516584 RELNP78509 3460 aa0.29□□□□□ -2.36
RNU6-1004P-201ENST00000516584 PARP4Q9UKK3 1724 aaKnown RBP0.29□□□□□ -2.36
RNU6-1004P-201ENST00000516584 FAT2Q9NYQ8 4349 aa0.29□□□□□ -2.36
RNU6-1004P-201ENST00000516584 MAP1BP46821 2468 aaKnown RBP0.28□□□□□ -2.36
RNU6-1004P-201ENST00000516584 DNAH12Q6ZR08 3092 aa0.28□□□□□ -2.36
RNU6-1004P-201ENST00000516584 WIZO95785 1651 aa0.28□□□□□ -2.36
RNU6-1004P-201ENST00000516584 MKI67P46013 3256 aaKnown RBP0.28□□□□□ -2.36
RNU6-1004P-201ENST00000516584 DCHS1Q96JQ0 3298 aa0.28□□□□□ -2.36
RNU6-1004P-201ENST00000516584 COL7A1Q02388 2944 aa0.28□□□□□ -2.36
RNU6-1004P-201ENST00000516584 TGP01266 2768 aa0.28□□□□□ -2.37
RNU6-1004P-201ENST00000516584 PLXNC1O60486 1568 aa0.28□□□□□ -2.37
RNU6-1004P-201ENST00000516584 REV3LO60673 3130 aa0.27□□□□□ -2.37
RNU6-1004P-201ENST00000516584 RIF1Q5UIP0 2472 aaKnown RBP0.27□□□□□ -2.37
RNU6-1004P-201ENST00000516584 LAMA3Q16787 3333 aa0.27□□□□□ -2.37
RNU6-1004P-201ENST00000516584 CFAP46Q8IYW2 2715 aa0.27□□□□□ -2.37
RNU6-1004P-201ENST00000516584 CNOT1A5YKK6 2376 aaKnown RBP0.27□□□□□ -2.37
RNU6-1004P-201ENST00000516584 SPG11Q96JI7 2443 aa0.27□□□□□ -2.37
RNU6-1004P-201ENST00000516584 NBEAL1Q6ZS30 2694 aa0.27□□□□□ -2.37
RNU6-1004P-201ENST00000516584 CENPFP49454 3210 aa0.26□□□□□ -2.37
RNU6-1004P-201ENST00000516584 HUWE1Q7Z6Z7 4374 aaKnown RBP0.26□□□□□ -2.37
RNU6-1004P-201ENST00000516584 NIPBLQ6KC79 2804 aaeCLIP0.26□□□□□ -2.37
RNU6-1004P-201ENST00000516584 NRAPQ86VF7 1730 aa0.26□□□□□ -2.37
RNU6-1004P-201ENST00000516584 MYCBP2O75592 4640 aa0.25□□□□□ -2.37
RNU6-1004P-201ENST00000516584 MUC3AQ02505 3323 aa0.25□□□□□ -2.37
RNU6-1004P-201ENST00000516584 ATRQ13535 2644 aa0.25□□□□□ -2.37
RNU6-1004P-201ENST00000516584 TJP1Q07157 1748 aa0.25□□□□□ -2.37
RNU6-1004P-201ENST00000516584 DEPDC5O75140 1603 aa0.25□□□□□ -2.37
RNU6-1004P-201ENST00000516584 MADDQ8WXG6 1647 aa0.25□□□□□ -2.37
RNU6-1004P-201ENST00000516584 RANBP2P49792 3224 aaKnown RBP0.25□□□□□ -2.37
RNU6-1004P-201ENST00000516584 ITSN1Q15811 1721 aa0.24□□□□□ -2.37
RNU6-1004P-201ENST00000516584 KMT2AQ03164 3969 aa0.24□□□□□ -2.37
RNU6-1004P-201ENST00000516584 ZC3H13Q5T200 1668 aaKnown RBP0.24□□□□□ -2.37
RNU6-1004P-201ENST00000516584 CRIP1P50238 77 aa0.24□□□□□ -2.37
RNU6-1004P-201ENST00000516584 EP300Q09472 2414 aaPredicted RBP0.24□□□□□ -2.37
RNU6-1004P-201ENST00000516584 TEX15Q9BXT5 2789 aa0.23□□□□□ -2.37
RNU6-1004P-201ENST00000516584 ACACBO00763 2458 aa0.23□□□□□ -2.37
RNU6-1004P-201ENST00000516584 CRYBG3Q68DQ2 2970 aa0.23□□□□□ -2.37
RNU6-1004P-201ENST00000516584 DMBT1Q9UGM3 2413 aaPredicted RBP0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms