RNA–Protein interactions for RNA: ENST00000516328.1

RNU6-1338P-201, Transcript of RNA, U6 small nuclear 1338, pseudogene, humanhuman

BASIC

Gene RNU6-1338P, Length 91 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1338P-201ENST00000516328 ARHGAP5Q13017 1502 aa-3.96□□□□□ -3.04
RNU6-1338P-201ENST00000516328 NESP48681 1621 aa-3.97□□□□□ -3.04
RNU6-1338P-201ENST00000516328 CC2D2AQ9P2K1 1620 aa-3.97□□□□□ -3.04
RNU6-1338P-201ENST00000516328 FRYLO94915 3013 aa-3.97□□□□□ -3.05
RNU6-1338P-201ENST00000516328 MAGI3Q5TCQ9 1506 aa-3.98□□□□□ -3.05
RNU6-1338P-201ENST00000516328 LINC01546A6NGU7 62 aa-3.98□□□□□ -3.05
RNU6-1338P-201ENST00000516328 AKAIN1P0CW23 69 aa-3.98□□□□□ -3.05
RNU6-1338P-201ENST00000516328 PRDM15P57071 1507 aaPredicted RBP-3.99□□□□□ -3.05
RNU6-1338P-201ENST00000516328 ABCC2Q92887 1545 aa-3.99□□□□□ -3.05
RNU6-1338P-201ENST00000516328 ABCA3Q99758 1704 aa-3.99□□□□□ -3.05
RNU6-1338P-201ENST00000516328 VPS13CQ709C8 3753 aa-4□□□□□ -3.05
RNU6-1338P-201ENST00000516328 DCHS1Q96JQ0 3298 aa-4□□□□□ -3.05
RNU6-1338P-201ENST00000516328 TMEM218A2RU14 115 aa-4□□□□□ -3.05
RNU6-1338P-201ENST00000516328 MYH4Q9Y623 1939 aa-4□□□□□ -3.05
RNU6-1338P-201ENST00000516328 PCNTO95613 3336 aa-4□□□□□ -3.05
RNU6-1338P-201ENST00000516328 SUPT6HQ7KZ85 1726 aaKnown RBP-4.01□□□□□ -3.05
RNU6-1338P-201ENST00000516328 WDFY4Q6ZS81 3184 aa-4.01□□□□□ -3.05
RNU6-1338P-201ENST00000516328 SERP2Q8N6R1 65 aa-4.02□□□□□ -3.05
RNU6-1338P-201ENST00000516328 RGPD1P0DJD0 1748 aa-4.02□□□□□ -3.05
RNU6-1338P-201ENST00000516328 SPHKAPQ2M3C7 1700 aa-4.02□□□□□ -3.05
RNU6-1338P-201ENST00000516328 LRRC7Q96NW7 1537 aa-4.03□□□□□ -3.05
RNU6-1338P-201ENST00000516328 H3BQ15 152 aa-4.03□□□□□ -3.05
RNU6-1338P-201ENST00000516328 hADV29S1A0JD25 119 aa-4.04□□□□□ -3.06
RNU6-1338P-201ENST00000516328 DEFB130BP0DP73 79 aa-4.04□□□□□ -3.06
RNU6-1338P-201ENST00000516328 DEFB130AP0DP74 79 aa-4.04□□□□□ -3.06
RNU6-1338P-201ENST00000516328 ZNF831Q5JPB2 1677 aa-4.04□□□□□ -3.06
RNU6-1338P-201ENST00000516328 MLH3Q9UHC1 1453 aa-4.05□□□□□ -3.06
RNU6-1338P-201ENST00000516328 ALKAL2Q6UX46 152 aa-4.05□□□□□ -3.06
RNU6-1338P-201ENST00000516328 MYOM2P54296 1465 aa-4.05□□□□□ -3.06
RNU6-1338P-201ENST00000516328 D6R8Y8 96 aa-4.06□□□□□ -3.06
RNU6-1338P-201ENST00000516328 UQCRHP07919 91 aa-4.06□□□□□ -3.06
RNU6-1338P-201ENST00000516328 MUSTN1Q8IVN3 82 aa-4.06□□□□□ -3.06
RNU6-1338P-201ENST00000516328 SVBPQ8N300 66 aa-4.06□□□□□ -3.06
RNU6-1338P-201ENST00000516328 ATP7BP35670 1465 aa-4.06□□□□□ -3.06
RNU6-1338P-201ENST00000516328 IGLV5-48A0A075B6I7 105 aa-4.07□□□□□ -3.06
RNU6-1338P-201ENST00000516328 TRGV9Q99603 122 aa-4.07□□□□□ -3.06
RNU6-1338P-201ENST00000516328 TIMM8BQ9Y5J9 83 aaPredicted RBP-4.07□□□□□ -3.06
RNU6-1338P-201ENST00000516328 RAPGEF2Q9Y4G8 1499 aa-4.07□□□□□ -3.06
RNU6-1338P-201ENST00000516328 NRKQ7Z2Y5 1582 aa-4.07□□□□□ -3.06
RNU6-1338P-201ENST00000516328 POLR1AO95602 1720 aaPredicted RBP-4.07□□□□□ -3.06
RNU6-1338P-201ENST00000516328 MUC3AQ02505 3323 aa-4.08□□□□□ -3.06
RNU6-1338P-201ENST00000516328 LYNX1G3V0Z9 82 aa-4.08□□□□□ -3.06
RNU6-1338P-201ENST00000516328 SNAPC5O75971 98 aa-4.08□□□□□ -3.06
RNU6-1338P-201ENST00000516328 LEPROTL1O95214 131 aa-4.08□□□□□ -3.06
RNU6-1338P-201ENST00000516328 NWD1Q149M9 1564 aa-4.08□□□□□ -3.06
RNU6-1338P-201ENST00000516328 F8WEM9 126 aa-4.09□□□□□ -3.06
RNU6-1338P-201ENST00000516328 NDUFC1O43677 76 aa-4.09□□□□□ -3.06
RNU6-1338P-201ENST00000516328 IAPPP10997 89 aa-4.09□□□□□ -3.06
RNU6-1338P-201ENST00000516328 HMGN3Q15651 99 aa-4.09□□□□□ -3.06
RNU6-1338P-201ENST00000516328 GAFA1Q96PS6 74 aa-4.09□□□□□ -3.06
RNU6-1338P-201ENST00000516328 EP400Q96L91 3159 aa-4.1□□□□□ -3.07
RNU6-1338P-201ENST00000516328 MPC2O95563 127 aa-4.1□□□□□ -3.07
RNU6-1338P-201ENST00000516328 IFI6P09912 130 aa-4.1□□□□□ -3.07
RNU6-1338P-201ENST00000516328 TOGARAM1Q9Y4F4 1720 aa-4.1□□□□□ -3.07
RNU6-1338P-201ENST00000516328 NRXN1Q9ULB1 1477 aa-4.11□□□□□ -3.07
RNU6-1338P-201ENST00000516328 LTN1O94822 1766 aa-4.12□□□□□ -3.07
RNU6-1338P-201ENST00000516328 ANKRD36BQ8N2N9 1353 aa-4.13□□□□□ -3.07
RNU6-1338P-201ENST00000516328 DEFB136Q30KP8 78 aa-4.13□□□□□ -3.07
RNU6-1338P-201ENST00000516328 IER3IP1Q9Y5U9 82 aa-4.13□□□□□ -3.07
RNU6-1338P-201ENST00000516328 SZT2Q5T011 3432 aa-4.14□□□□□ -3.07
RNU6-1338P-201ENST00000516328 PARP4Q9UKK3 1724 aaKnown RBP-4.14□□□□□ -3.07
RNU6-1338P-201ENST00000516328 ETDBQ3ZM63 59 aa-4.14□□□□□ -3.07
RNU6-1338P-201ENST00000516328 NALCNQ8IZF0 1738 aa-4.15□□□□□ -3.07
RNU6-1338P-201ENST00000516328 CEP250Q9BV73 2442 aa-4.16□□□□□ -3.08
RNU6-1338P-201ENST00000516328 A8MTW9 85 aa-4.16□□□□□ -3.08
RNU6-1338P-201ENST00000516328 SMARCA2P51531 1590 aa-4.16□□□□□ -3.08
RNU6-1338P-201ENST00000516328 MAST1Q9Y2H9 1570 aa-4.16□□□□□ -3.08
RNU6-1338P-201ENST00000516328 DOT1LQ8TEK3 1739 aa-4.17□□□□□ -3.08
RNU6-1338P-201ENST00000516328 BAZ1AQ9NRL2 1556 aaPredicted RBP-4.18□□□□□ -3.08
RNU6-1338P-201ENST00000516328 IQCF6A8MYZ5 107 aa-4.19□□□□□ -3.08
RNU6-1338P-201ENST00000516328 LY75O60449 1722 aa-4.2□□□□□ -3.08
RNU6-1338P-201ENST00000516328 ZNF720Q7Z2F6 126 aa-4.2□□□□□ -3.08
RNU6-1338P-201ENST00000516328 DNAH14Q0VDD8 3507 aa-4.2□□□□□ -3.08
RNU6-1338P-201ENST00000516328 A0A1B0GUT8 65 aa-4.21□□□□□ -3.08
RNU6-1338P-201ENST00000516328 SPART-AS1P0CW21 52 aa-4.21□□□□□ -3.08
RNU6-1338P-201ENST00000516328 TEX14Q8IWB6 1497 aa-4.22□□□□□ -3.08
RNU6-1338P-201ENST00000516328 DDX60LQ5H9U9 1706 aaKnown RBP-4.22□□□□□ -3.09
RNU6-1338P-201ENST00000516328 CLTCQ00610 1675 aaKnown RBP-4.22□□□□□ -3.09
RNU6-1338P-201ENST00000516328 NDUFA2O43678 99 aa-4.23□□□□□ -3.09
RNU6-1338P-201ENST00000516328 MT-ATP8P03928 68 aa-4.23□□□□□ -3.09
RNU6-1338P-201ENST00000516328 MKI67P46013 3256 aaKnown RBP-4.23□□□□□ -3.09
RNU6-1338P-201ENST00000516328 LCE6AA0A183 80 aa-4.24□□□□□ -3.09
RNU6-1338P-201ENST00000516328 PPP3R1P63098 170 aa-4.24□□□□□ -3.09
RNU6-1338P-201ENST00000516328 CCDC58Q4VC31 144 aa-4.24□□□□□ -3.09
RNU6-1338P-201ENST00000516328 GNGT2O14610 69 aa-4.25□□□□□ -3.09
RNU6-1338P-201ENST00000516328 GNG4P50150 75 aa-4.25□□□□□ -3.09
RNU6-1338P-201ENST00000516328 M0QZ58 72 aa-4.27□□□□□ -3.09
RNU6-1338P-201ENST00000516328 ROCK2O75116 1388 aaKnown RBP-4.27□□□□□ -3.09
RNU6-1338P-201ENST00000516328 PZPP20742 1482 aa-4.29□□□□□ -3.1
RNU6-1338P-201ENST00000516328 TRAV21A0A0B4J279 112 aa-4.29□□□□□ -3.1
RNU6-1338P-201ENST00000516328 LOC105371267A0A1B0GV96 52 aa-4.29□□□□□ -3.1
RNU6-1338P-201ENST00000516328 NOP10Q9NPE3 64 aaKnown RBP-4.3□□□□□ -3.1
RNU6-1338P-201ENST00000516328 ITSN2Q9NZM3 1697 aa-4.31□□□□□ -3.1
RNU6-1338P-201ENST00000516328 WT1-ASQ06250 92 aa-4.31□□□□□ -3.1
RNU6-1338P-201ENST00000516328 PLGLAQ15195 96 aa-4.31□□□□□ -3.1
RNU6-1338P-201ENST00000516328 EIF4G3O43432 1585 aaKnown RBP-4.31□□□□□ -3.1
RNU6-1338P-201ENST00000516328 ITSN1Q15811 1721 aa-4.32□□□□□ -3.1
RNU6-1338P-201ENST00000516328 PMCHL2Q9BQD1 86 aa-4.32□□□□□ -3.1
RNU6-1338P-201ENST00000516328 CFAP47Q6ZTR5 3102 aa-4.32□□□□□ -3.1
RNU6-1338P-201ENST00000516328 PLIN4Q96Q06 1357 aa-4.32□□□□□ -3.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms