RNA–Protein interactions for RNA: ENST00000516254.1

RNU6-1041P-201, Transcript of RNA, U6 small nuclear 1041, pseudogene, humanhuman

BASIC

Gene RNU6-1041P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1041P-201ENST00000516254 HMGA1P17096 107 aaKnown RBP-0.65□□□□□ -2.51
RNU6-1041P-201ENST00000516254 ANKRD11Q6UB99 2663 aaPredicted RBP-0.65□□□□□ -2.51
RNU6-1041P-201ENST00000516254 TTC37Q6PGP7 1564 aa-0.66□□□□□ -2.51
RNU6-1041P-201ENST00000516254 TMEM131LA2VDJ0 1609 aa-0.66□□□□□ -2.51
RNU6-1041P-201ENST00000516254 IFI27P40305 119 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-1041P-201ENST00000516254 PRLHP81277 87 aa-0.66□□□□□ -2.52
RNU6-1041P-201ENST00000516254 THOC2Q8NI27 1593 aaKnown RBP-0.66□□□□□ -2.52
RNU6-1041P-201ENST00000516254 DIP2BQ9P265 1576 aa-0.66□□□□□ -2.52
RNU6-1041P-201ENST00000516254 NCOA2Q15596 1464 aa-0.67□□□□□ -2.52
RNU6-1041P-201ENST00000516254 FASNP49327 2511 aaKnown RBP-0.67□□□□□ -2.52
RNU6-1041P-201ENST00000516254 KIF14Q15058 1648 aa-0.67□□□□□ -2.52
RNU6-1041P-201ENST00000516254 RGPD3A6NKT7 1758 aaPredicted RBP-0.67□□□□□ -2.52
RNU6-1041P-201ENST00000516254 VPS13BQ7Z7G8 4022 aa-0.67□□□□□ -2.52
RNU6-1041P-201ENST00000516254 MAP3K1Q13233 1512 aa-0.67□□□□□ -2.52
RNU6-1041P-201ENST00000516254 KANTRA0A1W2PQU2 76 aa-0.67□□□□□ -2.52
RNU6-1041P-201ENST00000516254 UMAD1C9J7I0 102 aa-0.67□□□□□ -2.52
RNU6-1041P-201ENST00000516254 LYNX1G3V0Z9 82 aa-0.67□□□□□ -2.52
RNU6-1041P-201ENST00000516254 MUC17Q685J3 4493 aa-0.67□□□□□ -2.52
RNU6-1041P-201ENST00000516254 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.68□□□□□ -2.52
RNU6-1041P-201ENST00000516254 VPS13DQ5THJ4 4388 aa-0.68□□□□□ -2.52
RNU6-1041P-201ENST00000516254 ATP5EP2Q5VTU8 51 aa-0.68□□□□□ -2.52
RNU6-1041P-201ENST00000516254 DOT1LQ8TEK3 1739 aa-0.68□□□□□ -2.52
RNU6-1041P-201ENST00000516254 ITPR3Q14573 2671 aa-0.68□□□□□ -2.52
RNU6-1041P-201ENST00000516254 ANK3Q12955 4377 aaKnown RBP-0.68□□□□□ -2.52
RNU6-1041P-201ENST00000516254 ZZEF1O43149 2961 aa-0.69□□□□□ -2.52
RNU6-1041P-201ENST00000516254 IFI6P09912 130 aa-0.69□□□□□ -2.52
RNU6-1041P-201ENST00000516254 MTORP42345 2549 aa-0.69□□□□□ -2.52
RNU6-1041P-201ENST00000516254 MYO18BQ8IUG5 2567 aa-0.69□□□□□ -2.52
RNU6-1041P-201ENST00000516254 LAMA1P25391 3075 aa-0.7□□□□□ -2.52
RNU6-1041P-201ENST00000516254 UACAQ9BZF9 1416 aa-0.7□□□□□ -2.52
RNU6-1041P-201ENST00000516254 USP9YO00507 2555 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-1041P-201ENST00000516254 H0YAA0 97 aa-0.7□□□□□ -2.52
RNU6-1041P-201ENST00000516254 EPPK1P58107 5090 aaKnown RBP-0.7□□□□□ -2.52
RNU6-1041P-201ENST00000516254 DMXL1Q9Y485 3027 aa-0.7□□□□□ -2.52
RNU6-1041P-201ENST00000516254 PIK3C2BO00750 1634 aa-0.71□□□□□ -2.52
RNU6-1041P-201ENST00000516254 NDUFA4O00483 81 aa-0.71□□□□□ -2.52
RNU6-1041P-201ENST00000516254 ARFGEF2Q9Y6D5 1785 aa-0.71□□□□□ -2.52
RNU6-1041P-201ENST00000516254 PPLO60437 1756 aa-0.72□□□□□ -2.52
RNU6-1041P-201ENST00000516254 SCN11AQ9UI33 1791 aa-0.72□□□□□ -2.52
RNU6-1041P-201ENST00000516254 MRPL33O75394 65 aaKnown RBP-0.72□□□□□ -2.52
RNU6-1041P-201ENST00000516254 IAPPP10997 89 aa-0.72□□□□□ -2.52
RNU6-1041P-201ENST00000516254 S4R3F8 94 aa-0.72□□□□□ -2.52
RNU6-1041P-201ENST00000516254 MGAM2Q2M2H8 2515 aa-0.73□□□□□ -2.53
RNU6-1041P-201ENST00000516254 GCN1Q92616 2671 aaKnown RBP-0.73□□□□□ -2.53
RNU6-1041P-201ENST00000516254 DEFB130BP0DP73 79 aa-0.73□□□□□ -2.53
RNU6-1041P-201ENST00000516254 DEFB130AP0DP74 79 aa-0.73□□□□□ -2.53
RNU6-1041P-201ENST00000516254 DSPP15924 2871 aaKnown RBP-0.74□□□□□ -2.53
RNU6-1041P-201ENST00000516254 ZNF831Q5JPB2 1677 aa-0.74□□□□□ -2.53
RNU6-1041P-201ENST00000516254 APOBP04114 4563 aaKnown RBP-0.74□□□□□ -2.53
RNU6-1041P-201ENST00000516254 DDX60LQ5H9U9 1706 aaKnown RBP-0.74□□□□□ -2.53
RNU6-1041P-201ENST00000516254 DEFB131BA0A096LNP1 70 aa-0.74□□□□□ -2.53
RNU6-1041P-201ENST00000516254 NREPQ16612 68 aa-0.74□□□□□ -2.53
RNU6-1041P-201ENST00000516254 UTP20O75691 2785 aaKnown RBP-0.75□□□□□ -2.53
RNU6-1041P-201ENST00000516254 DEFA5Q01523 94 aa-0.75□□□□□ -2.53
RNU6-1041P-201ENST00000516254 DNAH11Q96DT5 4516 aa-0.76□□□□□ -2.53
RNU6-1041P-201ENST00000516254 ACACAQ13085 2346 aa-0.76□□□□□ -2.53
RNU6-1041P-201ENST00000516254 DEFB110Q30KQ9 67 aa-0.76□□□□□ -2.53
RNU6-1041P-201ENST00000516254 DEFB121Q5J5C9 76 aa-0.76□□□□□ -2.53
RNU6-1041P-201ENST00000516254 DEFB106AQ8N104 65 aa-0.76□□□□□ -2.53
RNU6-1041P-201ENST00000516254 HFM1A2PYH4 1435 aa-0.76□□□□□ -2.53
RNU6-1041P-201ENST00000516254 LRRK2Q5S007 2527 aa-0.76□□□□□ -2.53
RNU6-1041P-201ENST00000516254 NBEAQ8NFP9 2946 aa-0.77□□□□□ -2.53
RNU6-1041P-201ENST00000516254 ITSN1Q15811 1721 aa-0.77□□□□□ -2.53
RNU6-1041P-201ENST00000516254 PLCH1Q4KWH8 1693 aa-0.77□□□□□ -2.53
RNU6-1041P-201ENST00000516254 CFAP43Q8NDM7 1665 aa-0.77□□□□□ -2.53
RNU6-1041P-201ENST00000516254 KDM5DQ9BY66 1539 aa-0.77□□□□□ -2.53
RNU6-1041P-201ENST00000516254 A0A087WXM4 84 aa-0.77□□□□□ -2.53
RNU6-1041P-201ENST00000516254 FAM186AA6NE01 2351 aa-0.77□□□□□ -2.53
RNU6-1041P-201ENST00000516254 ABCC1P33527 1531 aa-0.78□□□□□ -2.53
RNU6-1041P-201ENST00000516254 KIAA0586Q9BVV6 1533 aa-0.78□□□□□ -2.53
RNU6-1041P-201ENST00000516254 MT1HP80294 61 aa-0.78□□□□□ -2.53
RNU6-1041P-201ENST00000516254 ADIRFQ15847 76 aa-0.78□□□□□ -2.53
RNU6-1041P-201ENST00000516254 TDRG1Q3Y452 100 aa-0.78□□□□□ -2.53
RNU6-1041P-201ENST00000516254 ST20Q9HBF5 79 aa-0.78□□□□□ -2.53
RNU6-1041P-201ENST00000516254 CEP290O15078 2479 aa-0.78□□□□□ -2.53
RNU6-1041P-201ENST00000516254 PKD1L2Q7Z442 2459 aa-0.78□□□□□ -2.53
RNU6-1041P-201ENST00000516254 KALRNO60229 2985 aa-0.78□□□□□ -2.53
RNU6-1041P-201ENST00000516254 RALGAPBQ86X10 1494 aa-0.79□□□□□ -2.54
RNU6-1041P-201ENST00000516254 HYDINQ4G0P3 5121 aa-0.79□□□□□ -2.54
RNU6-1041P-201ENST00000516254 S100A13Q99584 98 aa-0.79□□□□□ -2.54
RNU6-1041P-201ENST00000516254 UBL5Q9BZL1 73 aa-0.79□□□□□ -2.54
RNU6-1041P-201ENST00000516254 ZC3H13Q5T200 1668 aaKnown RBP-0.79□□□□□ -2.54
RNU6-1041P-201ENST00000516254 WDR87Q6ZQQ6 2873 aa-0.79□□□□□ -2.54
RNU6-1041P-201ENST00000516254 DNAH1Q9P2D7 4330 aa-0.8□□□□□ -2.54
RNU6-1041P-201ENST00000516254 SMIM13P0DJ93 91 aa-0.8□□□□□ -2.54
RNU6-1041P-201ENST00000516254 KCNQ1DNQ9H478 68 aa-0.8□□□□□ -2.54
RNU6-1041P-201ENST00000516254 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.8□□□□□ -2.54
RNU6-1041P-201ENST00000516254 DNAH2Q9P225 4427 aa-0.8□□□□□ -2.54
RNU6-1041P-201ENST00000516254 ARHGAP35Q9NRY4 1499 aa-0.8□□□□□ -2.54
RNU6-1041P-201ENST00000516254 RNF17Q9BXT8 1623 aaKnown RBP-0.81□□□□□ -2.54
RNU6-1041P-201ENST00000516254 NBEAL2Q6ZNJ1 2754 aa-0.81□□□□□ -2.54
RNU6-1041P-201ENST00000516254 ACACBO00763 2458 aa-0.81□□□□□ -2.54
RNU6-1041P-201ENST00000516254 RB1CC1Q8TDY2 1594 aa-0.81□□□□□ -2.54
RNU6-1041P-201ENST00000516254 INO80Q9ULG1 1556 aaPredicted RBP-0.81□□□□□ -2.54
RNU6-1041P-201ENST00000516254 GNG2P59768 71 aa-0.81□□□□□ -2.54
RNU6-1041P-201ENST00000516254 DCAF1Q9Y4B6 1507 aa-0.81□□□□□ -2.54
RNU6-1041P-201ENST00000516254 RYR1P21817 5038 aa-0.81□□□□□ -2.54
RNU6-1041P-201ENST00000516254 BIRC6Q9NR09 4857 aa-0.81□□□□□ -2.54
RNU6-1041P-201ENST00000516254 DOPEY1Q5JWR5 2465 aa-0.81□□□□□ -2.54
RNU6-1041P-201ENST00000516254 RICTORQ6R327 1708 aa-0.82□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms