RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 SETXQ7Z333 2677 aaKnown RBP6.65□□□□□ -1.34
TRIM41-209ENST00000515834 OXTP01178 125 aa6.64□□□□□ -1.35
TRIM41-209ENST00000515834 AKAP13Q12802 2813 aa6.63□□□□□ -1.35
TRIM41-209ENST00000515834 FLNAP21333 2647 aaKnown RBP6.63□□□□□ -1.35
TRIM41-209ENST00000515834 HELZ2Q9BYK8 2649 aaKnown RBP6.62□□□□□ -1.35
TRIM41-209ENST00000515834 CFAP46Q8IYW2 2715 aa6.61□□□□□ -1.35
TRIM41-209ENST00000515834 H1FX-AS1Q4G0G2 97 aa6.6□□□□□ -1.35
TRIM41-209ENST00000515834 Q8NDZ9 215 aa6.6□□□□□ -1.35
TRIM41-209ENST00000515834 ADM2Q7Z4H4 148 aa6.6□□□□□ -1.35
TRIM41-209ENST00000515834 C5orf42Q9H799 3197 aa6.58□□□□□ -1.36
TRIM41-209ENST00000515834 Q75L30 129 aa6.57□□□□□ -1.36
TRIM41-209ENST00000515834 PRAC1Q96KF2 57 aa6.56□□□□□ -1.36
TRIM41-209ENST00000515834 SPRR1AP35321 89 aa6.56□□□□□ -1.36
TRIM41-209ENST00000515834 LINC00472Q9H8W2 130 aa6.54□□□□□ -1.36
TRIM41-209ENST00000515834 UTRNP46939 3433 aa6.54□□□□□ -1.36
TRIM41-209ENST00000515834 DNAH12Q6ZR08 3092 aa6.54□□□□□ -1.36
TRIM41-209ENST00000515834 A0A0A0MQY5 61 aa6.54□□□□□ -1.36
TRIM41-209ENST00000515834 FP248Q71RG6 208 aaPredicted RBP6.53□□□□□ -1.36
TRIM41-209ENST00000515834 LINC01558Q9Y6Z2 57 aa6.53□□□□□ -1.36
TRIM41-209ENST00000515834 RPL37P61927 97 aaKnown RBP6.53□□□□□ -1.36
TRIM41-209ENST00000515834 TEP1Q99973 2627 aaKnown RBP6.51□□□□□ -1.37
TRIM41-209ENST00000515834 TEX15Q9BXT5 2789 aa6.5□□□□□ -1.37
TRIM41-209ENST00000515834 SPRR1BP22528 89 aa6.5□□□□□ -1.37
TRIM41-209ENST00000515834 CENPEQ02224 2701 aa6.5□□□□□ -1.37
TRIM41-209ENST00000515834 KRTAP26-1Q6PEX3 210 aa6.5□□□□□ -1.37
TRIM41-209ENST00000515834 ROMO1P60602 79 aa6.49□□□□□ -1.37
TRIM41-209ENST00000515834 PANO1I0J062 215 aa6.49□□□□□ -1.37
TRIM41-209ENST00000515834 SPATA8Q6RVD6 105 aa6.49□□□□□ -1.37
TRIM41-209ENST00000515834 Q6ZR54 194 aa6.47□□□□□ -1.37
TRIM41-209ENST00000515834 A0A087X002 238 aa6.46□□□□□ -1.37
TRIM41-209ENST00000515834 NBEAL1Q6ZS30 2694 aa6.46□□□□□ -1.38
TRIM41-209ENST00000515834 DMBT1Q9UGM3 2413 aaPredicted RBP6.46□□□□□ -1.38
TRIM41-209ENST00000515834 H3BS24 57 aa6.45□□□□□ -1.38
TRIM41-209ENST00000515834 CHD6Q8TD26 2715 aa6.45□□□□□ -1.38
TRIM41-209ENST00000515834 STAB2Q8WWQ8 2551 aa6.42□□□□□ -1.38
TRIM41-209ENST00000515834 BAHCC1Q9P281 2608 aa6.41□□□□□ -1.38
TRIM41-209ENST00000515834 Q5VV11 94 aa6.41□□□□□ -1.38
TRIM41-209ENST00000515834 PCNTO95613 3336 aa6.39□□□□□ -1.39
TRIM41-209ENST00000515834 C20orf166-AS1Q96NR2 134 aa6.37□□□□□ -1.39
TRIM41-209ENST00000515834 UNC79Q9P2D8 2635 aa6.37□□□□□ -1.39
TRIM41-209ENST00000515834 CFAP54Q96N23 3096 aa6.36□□□□□ -1.39
TRIM41-209ENST00000515834 A8MUU9 505 aa6.36□□□□□ -1.39
TRIM41-209ENST00000515834 CYSTM1Q9H1C7 97 aa6.34□□□□□ -1.39
TRIM41-209ENST00000515834 A0A0C4DFX4 3053 aa6.33□□□□□ -1.4
TRIM41-209ENST00000515834 NOTCH1P46531 2555 aa6.33□□□□□ -1.4
TRIM41-209ENST00000515834 NOTCH2NLQ7Z3S9 236 aa6.31□□□□□ -1.4
TRIM41-209ENST00000515834 COL6A5A8TX70 2615 aa6.3□□□□□ -1.4
TRIM41-209ENST00000515834 Q5XG85 94 aa6.28□□□□□ -1.4
TRIM41-209ENST00000515834 LAMA2P24043 3122 aaKnown RBP6.27□□□□□ -1.41
TRIM41-209ENST00000515834 KRTAP11-1Q8IUC1 163 aa6.25□□□□□ -1.41
TRIM41-209ENST00000515834 KRTAP4-16G5E9R7 235 aaPredicted RBP6.24□□□□□ -1.41
TRIM41-209ENST00000515834 A8MU10 97 aa6.24□□□□□ -1.41
TRIM41-209ENST00000515834 FRYQ5TBA9 3013 aa6.21□□□□□ -1.41
TRIM41-209ENST00000515834 MGAQ8IWI9 3026 aa6.21□□□□□ -1.42
TRIM41-209ENST00000515834 RPS29P62273 56 aaKnown RBP6.19□□□□□ -1.42
TRIM41-209ENST00000515834 Q6ZRN7 208 aaPredicted RBP6.19□□□□□ -1.42
TRIM41-209ENST00000515834 MAP1AP78559 2803 aaPredicted RBP6.18□□□□□ -1.42
TRIM41-209ENST00000515834 A0A1B0GVY2 172 aa6.18□□□□□ -1.42
TRIM41-209ENST00000515834 KRTAP13-2Q52LG2 175 aa6.18□□□□□ -1.42
TRIM41-209ENST00000515834 KRTAP29-1A8MX34 341 aaPredicted RBP6.17□□□□□ -1.42
TRIM41-209ENST00000515834 FREM2Q5SZK8 3169 aa6.17□□□□□ -1.42
TRIM41-209ENST00000515834 REV3LO60673 3130 aa6.17□□□□□ -1.42
TRIM41-209ENST00000515834 TNP1P09430 55 aa6.15□□□□□ -1.42
TRIM41-209ENST00000515834 GCN1Q92616 2671 aaKnown RBP6.15□□□□□ -1.43
TRIM41-209ENST00000515834 CHD7Q9P2D1 2997 aa6.14□□□□□ -1.43
TRIM41-209ENST00000515834 KMT2BQ9UMN6 2715 aaPredicted RBP6.14□□□□□ -1.43
TRIM41-209ENST00000515834 WDFY4Q6ZS81 3184 aa6.13□□□□□ -1.43
TRIM41-209ENST00000515834 ASB16-AS1Q495Z4 193 aa6.13□□□□□ -1.43
TRIM41-209ENST00000515834 TRIOO75962 3097 aa6.13□□□□□ -1.43
TRIM41-209ENST00000515834 KRTAP10-8P60410 259 aa6.12□□□□□ -1.43
TRIM41-209ENST00000515834 ZNF292O60281 2723 aa6.12□□□□□ -1.43
TRIM41-209ENST00000515834 IGSF10Q6WRI0 2623 aa6.11□□□□□ -1.43
TRIM41-209ENST00000515834 C10orf95Q9H7T3 257 aa6.11□□□□□ -1.43
TRIM41-209ENST00000515834 NBEAL2Q6ZNJ1 2754 aa6.1□□□□□ -1.43
TRIM41-209ENST00000515834 MKI67P46013 3256 aaKnown RBP6.09□□□□□ -1.43
TRIM41-209ENST00000515834 XIRP2A4UGR9 3374 aa6.09□□□□□ -1.43
TRIM41-209ENST00000515834 RANBP2P49792 3224 aaKnown RBP6.09□□□□□ -1.44
TRIM41-209ENST00000515834 LAMA3Q16787 3333 aa6.08□□□□□ -1.44
TRIM41-209ENST00000515834 PRUNE2Q8WUY3 3088 aa6.07□□□□□ -1.44
TRIM41-209ENST00000515834 CRYBG3Q68DQ2 2970 aa6.07□□□□□ -1.44
TRIM41-209ENST00000515834 KRTAP7-1Q8IUC3 87 aa6.06□□□□□ -1.44
TRIM41-209ENST00000515834 UBR5O95071 2799 aaPredicted RBP6.05□□□□□ -1.44
TRIM41-209ENST00000515834 NSD1Q96L73 2696 aaPredicted RBP6.05□□□□□ -1.44
TRIM41-209ENST00000515834 KRTAP21-3Q3LHN1 58 aa6.05□□□□□ -1.44
TRIM41-209ENST00000515834 KRTAP25-1Q3LHN0 102 aa6.04□□□□□ -1.44
TRIM41-209ENST00000515834 KRTAP16-1A8MUX0 517 aa6.02□□□□□ -1.45
TRIM41-209ENST00000515834 BRCA2P51587 3418 aa6.02□□□□□ -1.45
TRIM41-209ENST00000515834 ITPR2Q14571 2701 aa6.02□□□□□ -1.45
TRIM41-209ENST00000515834 DSPP15924 2871 aaKnown RBP6□□□□□ -1.45
TRIM41-209ENST00000515834 KRTAP10-10P60014 251 aa6□□□□□ -1.45
TRIM41-209ENST00000515834 CELSR3Q9NYQ7 3312 aa5.99□□□□□ -1.45
TRIM41-209ENST00000515834 KRTAP13-1Q8IUC0 172 aa5.99□□□□□ -1.45
TRIM41-209ENST00000515834 DMXL2Q8TDJ6 3036 aa5.98□□□□□ -1.45
TRIM41-209ENST00000515834 TRANK1O15050 2925 aa5.98□□□□□ -1.45
TRIM41-209ENST00000515834 NDUFAF8A1L188 74 aa5.95□□□□□ -1.46
TRIM41-209ENST00000515834 XP32Q5T750 250 aa5.94□□□□□ -1.46
TRIM41-209ENST00000515834 UNC80Q8N2C7 3258 aa5.91□□□□□ -1.46
TRIM41-209ENST00000515834 VPS13AQ96RL7 3174 aa5.91□□□□□ -1.46
TRIM41-209ENST00000515834 TACC2O95359 2948 aa5.91□□□□□ -1.46
TRIM41-209ENST00000515834 CHD9Q3L8U1 2897 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms