RNA–Protein interactions for RNA: ENST00000510312.6

ARHGEF28-210, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2

Gene ARHGEF28, Length 8,285 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-210ENST00000510312 Q6ZR54 194 aa5.5□□□□□ -1.53
ARHGEF28-210ENST00000510312 LCE6AA0A183 80 aa5.49□□□□□ -1.53
ARHGEF28-210ENST00000510312 LINC00472Q9H8W2 130 aa5.49□□□□□ -1.53
ARHGEF28-210ENST00000510312 PLAC8Q9NZF1 115 aa5.46□□□□□ -1.54
ARHGEF28-210ENST00000510312 RPL37P61927 97 aaKnown RBP5.45□□□□□ -1.54
ARHGEF28-210ENST00000510312 SEC61BP60468 96 aaKnown RBP5.44□□□□□ -1.54
ARHGEF28-210ENST00000510312 CENPEQ02224 2701 aa5.44□□□□□ -1.54
ARHGEF28-210ENST00000510312 KRTAP10-1P60331 282 aa5.43□□□□□ -1.54
ARHGEF28-210ENST00000510312 AKAP13Q12802 2813 aa5.43□□□□□ -1.54
ARHGEF28-210ENST00000510312 KRTAP10-2P60368 255 aa5.42□□□□□ -1.54
ARHGEF28-210ENST00000510312 CENPFP49454 3210 aa5.4□□□□□ -1.54
ARHGEF28-210ENST00000510312 NBEAL1Q6ZS30 2694 aa5.4□□□□□ -1.54
ARHGEF28-210ENST00000510312 KRTAP25-1Q3LHN0 102 aa5.4□□□□□ -1.55
ARHGEF28-210ENST00000510312 Q5W150 140 aa5.4□□□□□ -1.55
ARHGEF28-210ENST00000510312 R4GN34 69 aa5.4□□□□□ -1.55
ARHGEF28-210ENST00000510312 KRTAP29-1A8MX34 341 aaPredicted RBP5.4□□□□□ -1.55
ARHGEF28-210ENST00000510312 DMBT1Q9UGM3 2413 aaPredicted RBP5.39□□□□□ -1.55
ARHGEF28-210ENST00000510312 MGAM2Q2M2H8 2515 aa5.36□□□□□ -1.55
ARHGEF28-210ENST00000510312 H1FX-AS1Q4G0G2 97 aa5.36□□□□□ -1.55
ARHGEF28-210ENST00000510312 KRTAP1-5Q9BYS1 174 aa5.35□□□□□ -1.55
ARHGEF28-210ENST00000510312 PLAC4Q8WY50 150 aa5.34□□□□□ -1.55
ARHGEF28-210ENST00000510312 Q8NDZ9 215 aa5.33□□□□□ -1.56
ARHGEF28-210ENST00000510312 M0QZ58 72 aa5.32□□□□□ -1.56
ARHGEF28-210ENST00000510312 FLNAP21333 2647 aaKnown RBP5.32□□□□□ -1.56
ARHGEF28-210ENST00000510312 HELZ2Q9BYK8 2649 aaKnown RBP5.3□□□□□ -1.56
ARHGEF28-210ENST00000510312 ADM2Q7Z4H4 148 aa5.3□□□□□ -1.56
ARHGEF28-210ENST00000510312 KRTAP26-1Q6PEX3 210 aa5.3□□□□□ -1.56
ARHGEF28-210ENST00000510312 ATRQ13535 2644 aa5.3□□□□□ -1.56
ARHGEF28-210ENST00000510312 UNC79Q9P2D8 2635 aa5.29□□□□□ -1.56
ARHGEF28-210ENST00000510312 UTRNP46939 3433 aa5.28□□□□□ -1.56
ARHGEF28-210ENST00000510312 NOTCH1P46531 2555 aa5.28□□□□□ -1.56
ARHGEF28-210ENST00000510312 GCN1Q92616 2671 aaKnown RBP5.27□□□□□ -1.57
ARHGEF28-210ENST00000510312 KRTAP4-16G5E9R7 235 aaPredicted RBP5.27□□□□□ -1.57
ARHGEF28-210ENST00000510312 HECTD1Q9ULT8 2610 aa5.26□□□□□ -1.57
ARHGEF28-210ENST00000510312 MAST4O15021 2626 aa5.25□□□□□ -1.57
ARHGEF28-210ENST00000510312 CHD6Q8TD26 2715 aa5.25□□□□□ -1.57
ARHGEF28-210ENST00000510312 STAB1Q9NY15 2570 aa5.25□□□□□ -1.57
ARHGEF28-210ENST00000510312 NOTCH2NLQ7Z3S9 236 aa5.24□□□□□ -1.57
ARHGEF28-210ENST00000510312 DNAH12Q6ZR08 3092 aa5.24□□□□□ -1.57
ARHGEF28-210ENST00000510312 PANO1I0J062 215 aa5.24□□□□□ -1.57
ARHGEF28-210ENST00000510312 ITPR3Q14573 2671 aa5.22□□□□□ -1.57
ARHGEF28-210ENST00000510312 C5orf42Q9H799 3197 aa5.2□□□□□ -1.58
ARHGEF28-210ENST00000510312 NDUFAF8A1L188 74 aa5.2□□□□□ -1.58
ARHGEF28-210ENST00000510312 COL6A5A8TX70 2615 aa5.16□□□□□ -1.58
ARHGEF28-210ENST00000510312 CFAP46Q8IYW2 2715 aa5.14□□□□□ -1.59
ARHGEF28-210ENST00000510312 STAB2Q8WWQ8 2551 aa5.14□□□□□ -1.59
ARHGEF28-210ENST00000510312 C20orf166-AS1Q96NR2 134 aa5.14□□□□□ -1.59
ARHGEF28-210ENST00000510312 RPS29P62273 56 aaKnown RBP5.13□□□□□ -1.59
ARHGEF28-210ENST00000510312 KRTAP11-1Q8IUC1 163 aa5.12□□□□□ -1.59
ARHGEF28-210ENST00000510312 A8MUU9 505 aa5.1□□□□□ -1.59
ARHGEF28-210ENST00000510312 PP632Q6XCG6 107 aa5.08□□□□□ -1.6
ARHGEF28-210ENST00000510312 ITPR1Q14643 2758 aa5.07□□□□□ -1.6
ARHGEF28-210ENST00000510312 FLNBO75369 2602 aaKnown RBP5.06□□□□□ -1.6
ARHGEF28-210ENST00000510312 A8MU10 97 aa5.05□□□□□ -1.6
ARHGEF28-210ENST00000510312 ITPR2Q14571 2701 aa5.04□□□□□ -1.6
ARHGEF28-210ENST00000510312 A0A1B0GVY2 172 aa5.02□□□□□ -1.61
ARHGEF28-210ENST00000510312 TEX15Q9BXT5 2789 aa5.01□□□□□ -1.61
ARHGEF28-210ENST00000510312 Q6ZRN7 208 aaPredicted RBP4.98□□□□□ -1.61
ARHGEF28-210ENST00000510312 CEP350Q5VT06 3117 aa4.98□□□□□ -1.61
ARHGEF28-210ENST00000510312 A0A0C4DFX4 3053 aa4.97□□□□□ -1.61
ARHGEF28-210ENST00000510312 NSD1Q96L73 2696 aaPredicted RBP4.97□□□□□ -1.61
ARHGEF28-210ENST00000510312 KRTAP13-2Q52LG2 175 aa4.97□□□□□ -1.61
ARHGEF28-210ENST00000510312 APCP25054 2843 aa4.97□□□□□ -1.61
ARHGEF28-210ENST00000510312 TEP1Q99973 2627 aaKnown RBP4.97□□□□□ -1.61
ARHGEF28-210ENST00000510312 NBEAL2Q6ZNJ1 2754 aa4.96□□□□□ -1.62
ARHGEF28-210ENST00000510312 BAHCC1Q9P281 2608 aa4.96□□□□□ -1.62
ARHGEF28-210ENST00000510312 MKI67P46013 3256 aaKnown RBP4.95□□□□□ -1.62
ARHGEF28-210ENST00000510312 PCNTO95613 3336 aa4.95□□□□□ -1.62
ARHGEF28-210ENST00000510312 TRANK1O15050 2925 aa4.94□□□□□ -1.62
ARHGEF28-210ENST00000510312 SETXQ7Z333 2677 aaKnown RBP4.94□□□□□ -1.62
ARHGEF28-210ENST00000510312 KRTAP13-1Q8IUC0 172 aa4.92□□□□□ -1.62
ARHGEF28-210ENST00000510312 ZNF292O60281 2723 aa4.92□□□□□ -1.62
ARHGEF28-210ENST00000510312 KRTAP7-1Q8IUC3 87 aa4.91□□□□□ -1.62
ARHGEF28-210ENST00000510312 P0C880 135 aa4.91□□□□□ -1.62
ARHGEF28-210ENST00000510312 MAP1AP78559 2803 aaPredicted RBP4.9□□□□□ -1.62
ARHGEF28-210ENST00000510312 UNC80Q8N2C7 3258 aa4.9□□□□□ -1.63
ARHGEF28-210ENST00000510312 KRTAP10-8P60410 259 aa4.89□□□□□ -1.63
ARHGEF28-210ENST00000510312 TNP1P09430 55 aa4.89□□□□□ -1.63
ARHGEF28-210ENST00000510312 UBR5O95071 2799 aaPredicted RBP4.87□□□□□ -1.63
ARHGEF28-210ENST00000510312 C10orf95Q9H7T3 257 aa4.87□□□□□ -1.63
ARHGEF28-210ENST00000510312 UTP20O75691 2785 aaKnown RBP4.86□□□□□ -1.63
ARHGEF28-210ENST00000510312 KRTAP21-3Q3LHN1 58 aa4.85□□□□□ -1.63
ARHGEF28-210ENST00000510312 IGSF10Q6WRI0 2623 aa4.85□□□□□ -1.63
ARHGEF28-210ENST00000510312 XIRP2A4UGR9 3374 aa4.84□□□□□ -1.63
ARHGEF28-210ENST00000510312 H0YAA0 97 aa4.84□□□□□ -1.64
ARHGEF28-210ENST00000510312 CFAP54Q96N23 3096 aa4.83□□□□□ -1.64
ARHGEF28-210ENST00000510312 CHD7Q9P2D1 2997 aa4.83□□□□□ -1.64
ARHGEF28-210ENST00000510312 KRTAP10-10P60014 251 aa4.81□□□□□ -1.64
ARHGEF28-210ENST00000510312 CELSR3Q9NYQ7 3312 aa4.79□□□□□ -1.64
ARHGEF28-210ENST00000510312 BRCA2P51587 3418 aa4.78□□□□□ -1.64
ARHGEF28-210ENST00000510312 LRBAP50851 2863 aa4.76□□□□□ -1.65
ARHGEF28-210ENST00000510312 XP32Q5T750 250 aa4.76□□□□□ -1.65
ARHGEF28-210ENST00000510312 NIPBLQ6KC79 2804 aaeCLIP4.75□□□□□ -1.65
ARHGEF28-210ENST00000510312 TRIOO75962 3097 aa4.74□□□□□ -1.65
ARHGEF28-210ENST00000510312 COL6A3P12111 3177 aa4.74□□□□□ -1.65
ARHGEF28-210ENST00000510312 RANBP2P49792 3224 aaKnown RBP4.72□□□□□ -1.65
ARHGEF28-210ENST00000510312 DNAH14Q0VDD8 3507 aa4.71□□□□□ -1.66
ARHGEF28-210ENST00000510312 FRYQ5TBA9 3013 aa4.7□□□□□ -1.66
ARHGEF28-210ENST00000510312 HTTP42858 3142 aa4.7□□□□□ -1.66
ARHGEF28-210ENST00000510312 CDH23Q9H251 3354 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms