RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 K7ERJ3 54 aa8.62□□□□□ -1.03
RNF4-210ENST00000508235 COX6CP09669 75 aa8.62□□□□□ -1.03
RNF4-210ENST00000508235 PSMB2P49721 201 aa8.62□□□□□ -1.03
RNF4-210ENST00000508235 OCIAD2Q56VL3 154 aa8.62□□□□□ -1.03
RNF4-210ENST00000508235 SMIM29Q86T20 159 aa8.62□□□□□ -1.03
RNF4-210ENST00000508235 TRIAP1O43715 76 aa8.61□□□□□ -1.03
RNF4-210ENST00000508235 GHRHP01286 108 aa8.61□□□□□ -1.03
RNF4-210ENST00000508235 CD164Q04900 197 aa8.58□□□□□ -1.04
RNF4-210ENST00000508235 FAM218AQ96MZ4 157 aa8.58□□□□□ -1.04
RNF4-210ENST00000508235 RETNLBQ9BQ08 111 aa8.58□□□□□ -1.04
RNF4-210ENST00000508235 SNHG12Q9BXW3 62 aa8.57□□□□□ -1.04
RNF4-210ENST00000508235 FP248Q71RG6 208 aaPredicted RBP8.56□□□□□ -1.04
RNF4-210ENST00000508235 LIMD2Q9BT23 127 aa8.56□□□□□ -1.04
RNF4-210ENST00000508235 HMCN2Q8NDA2 5059 aa8.55□□□□□ -1.04
RNF4-210ENST00000508235 DNAL4O96015 105 aa8.55□□□□□ -1.04
RNF4-210ENST00000508235 Q6JHZ5 121 aa8.54□□□□□ -1.04
RNF4-210ENST00000508235 HRCT1Q6UXD1 115 aa8.54□□□□□ -1.04
RNF4-210ENST00000508235 IGLV8-61A0A075B6I0 122 aa8.53□□□□□ -1.04
RNF4-210ENST00000508235 IGLV7-46A0A075B6I9 117 aa8.53□□□□□ -1.04
RNF4-210ENST00000508235 H3BQ85 93 aa8.53□□□□□ -1.04
RNF4-210ENST00000508235 CLEC2BQ92478 149 aa8.53□□□□□ -1.04
RNF4-210ENST00000508235 SCGB1C2P0DMR2 95 aa8.52□□□□□ -1.05
RNF4-210ENST00000508235 ORMDL1Q9P0S3 153 aa8.5□□□□□ -1.05
RNF4-210ENST00000508235 FABP2P12104 132 aa8.49□□□□□ -1.05
RNF4-210ENST00000508235 NDUFV3P56181 108 aaKnown RBP8.49□□□□□ -1.05
RNF4-210ENST00000508235 TPRXLQ17RH7 258 aa8.48□□□□□ -1.05
RNF4-210ENST00000508235 LCE2DQ5TA82 110 aaPredicted RBP8.48□□□□□ -1.05
RNF4-210ENST00000508235 Q5XG85 94 aa8.48□□□□□ -1.05
RNF4-210ENST00000508235 TRACP01848 142 aa8.47□□□□□ -1.05
RNF4-210ENST00000508235 IGFL1Q6UW32 110 aa8.47□□□□□ -1.05
RNF4-210ENST00000508235 A0A0G2JQZ4 141 aa8.46□□□□□ -1.06
RNF4-210ENST00000508235 TMEM256-PLSCR3K7ERE1 68 aa8.46□□□□□ -1.06
RNF4-210ENST00000508235 LST1O00453 97 aa8.45□□□□□ -1.06
RNF4-210ENST00000508235 TCL1BO95988 128 aa8.45□□□□□ -1.06
RNF4-210ENST00000508235 BATFQ16520 125 aa8.45□□□□□ -1.06
RNF4-210ENST00000508235 H3BMG7 143 aa8.44□□□□□ -1.06
RNF4-210ENST00000508235 H3BUT2 72 aa8.44□□□□□ -1.06
RNF4-210ENST00000508235 LYRM7Q5U5X0 104 aa8.44□□□□□ -1.06
RNF4-210ENST00000508235 CDIP1Q9H305 208 aa8.44□□□□□ -1.06
RNF4-210ENST00000508235 TRBV7-7A0A0K0K1E9 115 aa8.42□□□□□ -1.06
RNF4-210ENST00000508235 ATXN8Q156A1 80 aa8.41□□□□□ -1.06
RNF4-210ENST00000508235 UBE2V1Q13404 147 aa8.4□□□□□ -1.06
RNF4-210ENST00000508235 Q6Q795 121 aa8.4□□□□□ -1.06
RNF4-210ENST00000508235 KRTAP13-3Q3SY46 172 aa8.39□□□□□ -1.07
RNF4-210ENST00000508235 NAA38Q9BRA0 125 aaKnown RBP8.39□□□□□ -1.07
RNF4-210ENST00000508235 TEN1Q86WV5 123 aa8.38□□□□□ -1.07
RNF4-210ENST00000508235 TRBV20-1A0A075B6N2 111 aa8.37□□□□□ -1.07
RNF4-210ENST00000508235 ASB16-AS1Q495Z4 193 aa8.37□□□□□ -1.07
RNF4-210ENST00000508235 LRP2P98164 4655 aa8.36□□□□□ -1.07
RNF4-210ENST00000508235 C1orf195Q5TG92 126 aa8.36□□□□□ -1.07
RNF4-210ENST00000508235 ANKRD29Q8N6D5 301 aa8.36□□□□□ -1.07
RNF4-210ENST00000508235 SS18L2Q9UHA2 77 aa8.36□□□□□ -1.07
RNF4-210ENST00000508235 BAALC-AS2P0C853 105 aa8.35□□□□□ -1.07
RNF4-210ENST00000508235 C9orf118A6NHY6 69 aa8.34□□□□□ -1.07
RNF4-210ENST00000508235 A0A1B0GV72 72 aa8.31□□□□□ -1.08
RNF4-210ENST00000508235 TAX1BP3O14907 124 aa8.31□□□□□ -1.08
RNF4-210ENST00000508235 RBM3P98179 157 aaKnown RBP8.31□□□□□ -1.08
RNF4-210ENST00000508235 LPAP08519 4548 aa8.3□□□□□ -1.08
RNF4-210ENST00000508235 TRBV7-4A0A0J9YYF1 115 aa8.3□□□□□ -1.08
RNF4-210ENST00000508235 DSCR8Q96T75 97 aa8.3□□□□□ -1.08
RNF4-210ENST00000508235 A0A087WSZ3 146 aa8.29□□□□□ -1.08
RNF4-210ENST00000508235 A0A1W2PNM2 257 aa8.29□□□□□ -1.08
RNF4-210ENST00000508235 A0A1W2PPM0 123 aa8.29□□□□□ -1.08
RNF4-210ENST00000508235 JMJD7-PLA2G4BH0Y9G9 81 aa8.28□□□□□ -1.08
RNF4-210ENST00000508235 CCKP06307 115 aa8.28□□□□□ -1.08
RNF4-210ENST00000508235 COL5A1-AS1Q5SY13 56 aa8.28□□□□□ -1.08
RNF4-210ENST00000508235 UBR4Q5T4S7 5183 aa8.27□□□□□ -1.09
RNF4-210ENST00000508235 C9JAW5 83 aa8.27□□□□□ -1.09
RNF4-210ENST00000508235 XP32Q5T750 250 aa8.25□□□□□ -1.09
RNF4-210ENST00000508235 C9orf92A6NGG3 77 aa8.24□□□□□ -1.09
RNF4-210ENST00000508235 SEC61BP60468 96 aaKnown RBP8.24□□□□□ -1.09
RNF4-210ENST00000508235 C21orf62-AS1Q17RA5 79 aa8.24□□□□□ -1.09
RNF4-210ENST00000508235 H3BT86 120 aa8.22□□□□□ -1.09
RNF4-210ENST00000508235 VPS25Q9BRG1 176 aa8.22□□□□□ -1.09
RNF4-210ENST00000508235 PCP4L1A6NKN8 68 aa8.21□□□□□ -1.1
RNF4-210ENST00000508235 PDE6GP18545 87 aa8.21□□□□□ -1.1
RNF4-210ENST00000508235 SPCS1Q9Y6A9 102 aa8.21□□□□□ -1.1
RNF4-210ENST00000508235 LOC110117498A0A087WWA1 95 aa8.19□□□□□ -1.1
RNF4-210ENST00000508235 A0A1B0GW54 56 aa8.17□□□□□ -1.1
RNF4-210ENST00000508235 Q6ZQT0 140 aa8.17□□□□□ -1.1
RNF4-210ENST00000508235 OBSCN-AS1Q96MR7 158 aa8.17□□□□□ -1.1
RNF4-210ENST00000508235 Q96NJ1 140 aa8.17□□□□□ -1.1
RNF4-210ENST00000508235 C14orf132Q9NPU4 83 aa8.15□□□□□ -1.1
RNF4-210ENST00000508235 A0A0U1RQV1 116 aa8.14□□□□□ -1.11
RNF4-210ENST00000508235 IGKV4-1P06312 121 aa8.14□□□□□ -1.11
RNF4-210ENST00000508235 SIGMAR1Q99720 223 aa8.14□□□□□ -1.11
RNF4-210ENST00000508235 MTURNQ8N3F0 131 aa8.13□□□□□ -1.11
RNF4-210ENST00000508235 LINC00472Q9H8W2 130 aa8.13□□□□□ -1.11
RNF4-210ENST00000508235 K7EP34 96 aa8.11□□□□□ -1.11
RNF4-210ENST00000508235 RPL37P61927 97 aaKnown RBP8.1□□□□□ -1.11
RNF4-210ENST00000508235 GTF2H5Q6ZYL4 71 aa8.1□□□□□ -1.11
RNF4-210ENST00000508235 J3KT08 172 aa8.09□□□□□ -1.11
RNF4-210ENST00000508235 PCOTHQ58A44 107 aa8.08□□□□□ -1.12
RNF4-210ENST00000508235 DEFB116Q30KQ4 102 aa8.07□□□□□ -1.12
RNF4-210ENST00000508235 RNF213Q63HN8 5207 aa8.07□□□□□ -1.12
RNF4-210ENST00000508235 LINC00313P59037 77 aa8.06□□□□□ -1.12
RNF4-210ENST00000508235 Q75L30 129 aa8.06□□□□□ -1.12
RNF4-210ENST00000508235 SMCPP49901 116 aaPredicted RBP8.04□□□□□ -1.12
RNF4-210ENST00000508235 DSCR10P59022 87 aa8.03□□□□□ -1.12
RNF4-210ENST00000508235 ATP11AUNQ6ZP68 121 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms