RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 FREM2Q5SZK8 3169 aa1.61□□□□□ -2.15
HMGB3P15-201ENST00000507326 WDFY4Q6ZS81 3184 aa1.61□□□□□ -2.15
HMGB3P15-201ENST00000507326 ABCA2Q9BZC7 2435 aa1.61□□□□□ -2.15
HMGB3P15-201ENST00000507326 K7EIL1 84 aa1.61□□□□□ -2.15
HMGB3P15-201ENST00000507326 COX6A2Q02221 97 aa1.61□□□□□ -2.15
HMGB3P15-201ENST00000507326 TFF3Q07654 80 aa1.61□□□□□ -2.15
HMGB3P15-201ENST00000507326 PCOTHQ58A44 107 aa1.61□□□□□ -2.15
HMGB3P15-201ENST00000507326 SPINK9Q5DT21 86 aa1.61□□□□□ -2.15
HMGB3P15-201ENST00000507326 NDUFA1O15239 70 aa1.6□□□□□ -2.15
HMGB3P15-201ENST00000507326 PRB1P04280 392 aa1.6□□□□□ -2.15
HMGB3P15-201ENST00000507326 LYNX1P0DP58 116 aa1.6□□□□□ -2.15
HMGB3P15-201ENST00000507326 C6orf48Q9UBA6 75 aa1.6□□□□□ -2.15
HMGB3P15-201ENST00000507326 NCOR1O75376 2440 aa1.6□□□□□ -2.15
HMGB3P15-201ENST00000507326 VPS13AQ96RL7 3174 aa1.6□□□□□ -2.15
HMGB3P15-201ENST00000507326 CACNA1HO95180 2353 aa1.59□□□□□ -2.15
HMGB3P15-201ENST00000507326 APC2O95996 2303 aa1.59□□□□□ -2.15
HMGB3P15-201ENST00000507326 IAPPP10997 89 aa1.59□□□□□ -2.15
HMGB3P15-201ENST00000507326 PRO0255Q9UI72 69 aa1.59□□□□□ -2.15
HMGB3P15-201ENST00000507326 FRYLO94915 3013 aa1.58□□□□□ -2.16
HMGB3P15-201ENST00000507326 PKDREJQ9NTG1 2253 aa1.58□□□□□ -2.16
HMGB3P15-201ENST00000507326 I3L2K1 104 aa1.58□□□□□ -2.16
HMGB3P15-201ENST00000507326 CELSR3Q9NYQ7 3312 aa1.58□□□□□ -2.16
HMGB3P15-201ENST00000507326 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.58□□□□□ -2.16
HMGB3P15-201ENST00000507326 LOC400499M0QZD8 3231 aa1.58□□□□□ -2.16
HMGB3P15-201ENST00000507326 CFAP54Q96N23 3096 aa1.58□□□□□ -2.16
HMGB3P15-201ENST00000507326 COL6A3P12111 3177 aa1.57□□□□□ -2.16
HMGB3P15-201ENST00000507326 PRCDQ00LT1 54 aa1.57□□□□□ -2.16
HMGB3P15-201ENST00000507326 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
HMGB3P15-201ENST00000507326 PCNX1Q96RV3 2341 aa1.57□□□□□ -2.16
HMGB3P15-201ENST00000507326 PTPRQQ9UMZ3 2332 aa1.57□□□□□ -2.16
HMGB3P15-201ENST00000507326 SMG1Q96Q15 3661 aaKnown RBP1.56□□□□□ -2.16
HMGB3P15-201ENST00000507326 WNK2Q9Y3S1 2297 aa1.56□□□□□ -2.16
HMGB3P15-201ENST00000507326 J3QKU1 62 aa1.56□□□□□ -2.16
HMGB3P15-201ENST00000507326 RPL39P5Q59GN2 51 aa1.56□□□□□ -2.16
HMGB3P15-201ENST00000507326 ASPMQ8IZT6 3477 aa1.56□□□□□ -2.16
HMGB3P15-201ENST00000507326 CFAP47Q6ZTR5 3102 aa1.56□□□□□ -2.16
HMGB3P15-201ENST00000507326 PTPRZ1P23471 2315 aaPredicted RBP1.56□□□□□ -2.16
HMGB3P15-201ENST00000507326 JMJD1CQ15652 2540 aa1.56□□□□□ -2.16
HMGB3P15-201ENST00000507326 ACACAQ13085 2346 aa1.55□□□□□ -2.16
HMGB3P15-201ENST00000507326 WT1-ASQ06250 92 aa1.55□□□□□ -2.16
HMGB3P15-201ENST00000507326 KLK9Q2XQG4 91 aa1.55□□□□□ -2.16
HMGB3P15-201ENST00000507326 TMEM167AQ8TBQ9 72 aa1.55□□□□□ -2.16
HMGB3P15-201ENST00000507326 ROS1P08922 2347 aa1.55□□□□□ -2.16
HMGB3P15-201ENST00000507326 HIVEP3Q5T1R4 2406 aa1.55□□□□□ -2.16
HMGB3P15-201ENST00000507326 H3BUA1 57 aa1.54□□□□□ -2.16
HMGB3P15-201ENST00000507326 LEAP2Q969E1 77 aa1.54□□□□□ -2.16
HMGB3P15-201ENST00000507326 KAAG1Q9UBP8 84 aa1.54□□□□□ -2.16
HMGB3P15-201ENST00000507326 DCHS1Q96JQ0 3298 aa1.54□□□□□ -2.16
HMGB3P15-201ENST00000507326 SPTBN2O15020 2390 aa1.54□□□□□ -2.16
HMGB3P15-201ENST00000507326 CEP250Q9BV73 2442 aa1.54□□□□□ -2.16
HMGB3P15-201ENST00000507326 AKAP9Q99996 3911 aa1.53□□□□□ -2.16
HMGB3P15-201ENST00000507326 DEFB108AA8MXU0 73 aa1.53□□□□□ -2.16
HMGB3P15-201ENST00000507326 K7EIM0 57 aa1.53□□□□□ -2.16
HMGB3P15-201ENST00000507326 ANK3Q12955 4377 aaKnown RBP1.53□□□□□ -2.16
HMGB3P15-201ENST00000507326 FRYQ5TBA9 3013 aa1.53□□□□□ -2.16
HMGB3P15-201ENST00000507326 Q5VSD8 79 aa1.53□□□□□ -2.16
HMGB3P15-201ENST00000507326 C10orf95Q9H7T3 257 aa1.53□□□□□ -2.16
HMGB3P15-201ENST00000507326 VPS13CQ709C8 3753 aa1.53□□□□□ -2.17
HMGB3P15-201ENST00000507326 GVINP1Q7Z2Y8 2422 aa1.52□□□□□ -2.17
HMGB3P15-201ENST00000507326 CSMD1Q96PZ7 3565 aa1.52□□□□□ -2.17
HMGB3P15-201ENST00000507326 KRTAP12-1P59990 96 aa1.52□□□□□ -2.17
HMGB3P15-201ENST00000507326 DEFB124Q8NES8 71 aa1.52□□□□□ -2.17
HMGB3P15-201ENST00000507326 ANKHD1Q8IWZ3 2542 aaKnown RBP1.52□□□□□ -2.17
HMGB3P15-201ENST00000507326 TTC28Q96AY4 2481 aa1.52□□□□□ -2.17
HMGB3P15-201ENST00000507326 MUC6Q6W4X9 2439 aa1.52□□□□□ -2.17
HMGB3P15-201ENST00000507326 SPTBN1Q01082 2364 aaKnown RBP1.52□□□□□ -2.17
HMGB3P15-201ENST00000507326 WDR87Q6ZQQ6 2873 aa1.52□□□□□ -2.17
HMGB3P15-201ENST00000507326 HIVEP2P31629 2446 aa1.51□□□□□ -2.17
HMGB3P15-201ENST00000507326 LAMA5O15230 3695 aa1.51□□□□□ -2.17
HMGB3P15-201ENST00000507326 HRNRQ86YZ3 2850 aaPredicted RBP1.51□□□□□ -2.17
HMGB3P15-201ENST00000507326 APLNQ9ULZ1 77 aa1.51□□□□□ -2.17
HMGB3P15-201ENST00000507326 EP300Q09472 2414 aaPredicted RBP1.51□□□□□ -2.17
HMGB3P15-201ENST00000507326 RELNP78509 3460 aa1.5□□□□□ -2.17
HMGB3P15-201ENST00000507326 DMXL1Q9Y485 3027 aa1.5□□□□□ -2.17
HMGB3P15-201ENST00000507326 DEFB131AP59861 70 aa1.5□□□□□ -2.17
HMGB3P15-201ENST00000507326 PRB3Q04118 309 aaPredicted RBP1.5□□□□□ -2.17
HMGB3P15-201ENST00000507326 DEFB109BQ30KR1 87 aa1.5□□□□□ -2.17
HMGB3P15-201ENST00000507326 DEFB105AQ8NG35 78 aa1.5□□□□□ -2.17
HMGB3P15-201ENST00000507326 TLN1Q9Y490 2541 aaKnown RBP1.5□□□□□ -2.17
HMGB3P15-201ENST00000507326 ANKRD11Q6UB99 2663 aaPredicted RBP1.5□□□□□ -2.17
HMGB3P15-201ENST00000507326 AKAP13Q12802 2813 aa1.49□□□□□ -2.17
HMGB3P15-201ENST00000507326 BDP1A6H8Y1 2624 aa1.49□□□□□ -2.17
HMGB3P15-201ENST00000507326 KRTAP21-3Q3LHN1 58 aa1.49□□□□□ -2.17
HMGB3P15-201ENST00000507326 WFDC13Q8IUB5 93 aa1.49□□□□□ -2.17
HMGB3P15-201ENST00000507326 DEFB108BQ8NET1 73 aa1.49□□□□□ -2.17
HMGB3P15-201ENST00000507326 ZNF469Q96JG9 3925 aaPredicted RBP1.49□□□□□ -2.17
HMGB3P15-201ENST00000507326 MGAQ8IWI9 3026 aa1.48□□□□□ -2.17
HMGB3P15-201ENST00000507326 ZNF292O60281 2723 aa1.48□□□□□ -2.17
HMGB3P15-201ENST00000507326 TPRP12270 2363 aaKnown RBP1.48□□□□□ -2.17
HMGB3P15-201ENST00000507326 H0YAA0 97 aa1.48□□□□□ -2.17
HMGB3P15-201ENST00000507326 WFDC10BQ8IUB3 73 aa1.48□□□□□ -2.17
HMGB3P15-201ENST00000507326 KRTAP13-1Q8IUC0 172 aa1.48□□□□□ -2.17
HMGB3P15-201ENST00000507326 ZZEF1O43149 2961 aa1.47□□□□□ -2.17
HMGB3P15-201ENST00000507326 RIF1Q5UIP0 2472 aaKnown RBP1.47□□□□□ -2.17
HMGB3P15-201ENST00000507326 SVEP1Q4LDE5 3571 aa1.47□□□□□ -2.17
HMGB3P15-201ENST00000507326 DSPP15924 2871 aaKnown RBP1.47□□□□□ -2.17
HMGB3P15-201ENST00000507326 ATMQ13315 3056 aa1.47□□□□□ -2.17
HMGB3P15-201ENST00000507326 ADGRG4Q8IZF6 3080 aa1.47□□□□□ -2.17
HMGB3P15-201ENST00000507326 A8MTW9 85 aa1.47□□□□□ -2.17
HMGB3P15-201ENST00000507326 APELAP0DMC3 54 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms