RNA–Protein interactions for RNA: ENST00000506137.1

HTT-203, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-203ENST00000506137 SPINK7P58062 85 aa5.47□□□□□ -1.53
HTT-203ENST00000506137 HAMPP81172 84 aa5.47□□□□□ -1.53
HTT-203ENST00000506137 SMIM2Q9BVW6 85 aa5.47□□□□□ -1.53
HTT-203ENST00000506137 NUP214P35658 2090 aaPredicted RBP5.47□□□□□ -1.53
HTT-203ENST00000506137 GIG44P09565 113 aaPredicted RBP5.46□□□□□ -1.54
HTT-203ENST00000506137 DEFB116Q30KQ4 102 aa5.46□□□□□ -1.54
HTT-203ENST00000506137 LINC01590Q5TEZ4 76 aa5.46□□□□□ -1.54
HTT-203ENST00000506137 C9orf163Q8N9P6 203 aa5.46□□□□□ -1.54
HTT-203ENST00000506137 LITAFQ99732 161 aa5.46□□□□□ -1.54
HTT-203ENST00000506137 KCNQ1DNQ9H478 68 aa5.46□□□□□ -1.54
HTT-203ENST00000506137 PSORS1C2Q9UIG4 136 aa5.46□□□□□ -1.54
HTT-203ENST00000506137 ETDCA0A1B0GVM5 59 aa5.45□□□□□ -1.54
HTT-203ENST00000506137 FXYD4P59646 89 aa5.45□□□□□ -1.54
HTT-203ENST00000506137 DEFB112Q30KQ8 113 aa5.45□□□□□ -1.54
HTT-203ENST00000506137 PATE1Q8WXA2 126 aa5.45□□□□□ -1.54
HTT-203ENST00000506137 A0A1B0GUV1 79 aa5.44□□□□□ -1.54
HTT-203ENST00000506137 KRTAP9-2Q9BYQ4 174 aa5.43□□□□□ -1.54
HTT-203ENST00000506137 PRR14LQ5THK1 2151 aa5.42□□□□□ -1.54
HTT-203ENST00000506137 IGLV4-69A0A075B6H9 119 aa5.42□□□□□ -1.54
HTT-203ENST00000506137 IGKV3OR2-268A0A0C4DH90 116 aa5.42□□□□□ -1.54
HTT-203ENST00000506137 ZNF861PO60384 105 aa5.41□□□□□ -1.54
HTT-203ENST00000506137 COA5Q86WW8 74 aa5.41□□□□□ -1.54
HTT-203ENST00000506137 PLCE1Q9P212 2302 aa5.41□□□□□ -1.54
HTT-203ENST00000506137 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.4□□□□□ -1.54
HTT-203ENST00000506137 IGKV3-15P01624 115 aa5.4□□□□□ -1.54
HTT-203ENST00000506137 RNASE3P12724 160 aaKnown RBP5.4□□□□□ -1.54
HTT-203ENST00000506137 DMBT1Q9UGM3 2413 aaPredicted RBP5.39□□□□□ -1.55
HTT-203ENST00000506137 TRGV2A0A075B6R0 118 aa5.39□□□□□ -1.55
HTT-203ENST00000506137 STATHP02808 62 aa5.39□□□□□ -1.55
HTT-203ENST00000506137 CCL19Q99731 98 aa5.39□□□□□ -1.55
HTT-203ENST00000506137 KRTAP15-1Q3LI76 137 aa5.38□□□□□ -1.55
HTT-203ENST00000506137 KRTAP4-12Q9BQ66 201 aa5.38□□□□□ -1.55
HTT-203ENST00000506137 NCR3O14931 201 aa5.37□□□□□ -1.55
HTT-203ENST00000506137 MRPL33O75394 65 aaKnown RBP5.37□□□□□ -1.55
HTT-203ENST00000506137 TTTY10Q9BZA0 68 aa5.37□□□□□ -1.55
HTT-203ENST00000506137 IGKV2-40A0A087WW87 121 aaPredicted RBP5.36□□□□□ -1.55
HTT-203ENST00000506137 FAM168BA1KXE4 195 aa5.36□□□□□ -1.55
HTT-203ENST00000506137 IGKV2D-40P01614 121 aaPredicted RBP5.36□□□□□ -1.55
HTT-203ENST00000506137 Q6ZTI0 123 aa5.36□□□□□ -1.55
HTT-203ENST00000506137 IGLV3-1P01715 115 aa5.35□□□□□ -1.55
HTT-203ENST00000506137 SPINT4Q6UDR6 99 aa5.35□□□□□ -1.55
HTT-203ENST00000506137 KRTAP19-1Q8IUB9 90 aa5.35□□□□□ -1.55
HTT-203ENST00000506137 IGKV4-1P06312 121 aa5.34□□□□□ -1.55
HTT-203ENST00000506137 LCE3BQ5TA77 95 aa5.34□□□□□ -1.55
HTT-203ENST00000506137 PRO2289Q9P1D8 64 aa5.34□□□□□ -1.55
HTT-203ENST00000506137 TRBV6-4A0A1B0GX49 114 aa5.33□□□□□ -1.56
HTT-203ENST00000506137 DEFB110Q30KQ9 67 aa5.33□□□□□ -1.56
HTT-203ENST00000506137 LINC00308Q8TCZ7 52 aa5.33□□□□□ -1.56
HTT-203ENST00000506137 DNAH9Q9NYC9 4486 aa5.33□□□□□ -1.56
HTT-203ENST00000506137 LINC00959A0A1B0GUT2 108 aa5.32□□□□□ -1.56
HTT-203ENST00000506137 NDUFA1O15239 70 aa5.32□□□□□ -1.56
HTT-203ENST00000506137 COX7BP24311 80 aa5.32□□□□□ -1.56
HTT-203ENST00000506137 TNCP24821 2201 aa5.32□□□□□ -1.56
HTT-203ENST00000506137 TRGV1A0A0A0MS02 117 aa5.31□□□□□ -1.56
HTT-203ENST00000506137 PRB2P02812 416 aaPredicted RBP5.31□□□□□ -1.56
HTT-203ENST00000506137 DNAH7Q8WXX0 4024 aa5.31□□□□□ -1.56
HTT-203ENST00000506137 H0YGG7 62 aa5.3□□□□□ -1.56
HTT-203ENST00000506137 A0A087WTM6 91 aa5.29□□□□□ -1.56
HTT-203ENST00000506137 KRTAP4-5Q9BYR2 181 aa5.29□□□□□ -1.56
HTT-203ENST00000506137 ALPK2Q86TB3 2170 aa5.29□□□□□ -1.56
HTT-203ENST00000506137 A0A1W2PNN7 141 aa5.28□□□□□ -1.56
HTT-203ENST00000506137 IGKV2-29A2NJV5 120 aaPredicted RBP5.28□□□□□ -1.56
HTT-203ENST00000506137 IGLV4-60A0A075B6I1 120 aa5.27□□□□□ -1.57
HTT-203ENST00000506137 A0A1B0GU69 56 aa5.27□□□□□ -1.57
HTT-203ENST00000506137 DEFB134Q4QY38 66 aa5.27□□□□□ -1.57
HTT-203ENST00000506137 KRTAP19-4Q3LI73 84 aa5.26□□□□□ -1.57
HTT-203ENST00000506137 TYMSOSQ8TAI1 123 aa5.26□□□□□ -1.57
HTT-203ENST00000506137 MUC2Q02817 5179 aa5.25□□□□□ -1.57
HTT-203ENST00000506137 DEFB131BA0A096LNP1 70 aa5.25□□□□□ -1.57
HTT-203ENST00000506137 LINC00472Q9H8W2 130 aa5.25□□□□□ -1.57
HTT-203ENST00000506137 DNAH3Q8TD57 4116 aa5.25□□□□□ -1.57
HTT-203ENST00000506137 A0A087WYN8 130 aa5.24□□□□□ -1.57
HTT-203ENST00000506137 NBDYA0A0U1RRE5 68 aa5.24□□□□□ -1.57
HTT-203ENST00000506137 RPL37AP61513 92 aaKnown RBP5.24□□□□□ -1.57
HTT-203ENST00000506137 LY6EQ16553 131 aa5.24□□□□□ -1.57
HTT-203ENST00000506137 SPINK14Q6IE38 97 aa5.24□□□□□ -1.57
HTT-203ENST00000506137 WNK2Q9Y3S1 2297 aa5.23□□□□□ -1.57
HTT-203ENST00000506137 A0A096LNT2 108 aa5.22□□□□□ -1.57
HTT-203ENST00000506137 SRRM2Q9UQ35 2752 aaKnown RBP5.21□□□□□ -1.58
HTT-203ENST00000506137 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.2□□□□□ -1.58
HTT-203ENST00000506137 SLPIP03973 132 aa5.19□□□□□ -1.58
HTT-203ENST00000506137 A0A0G2JQZ4 141 aa5.18□□□□□ -1.58
HTT-203ENST00000506137 A0A0J9YWU9 116 aa5.18□□□□□ -1.58
HTT-203ENST00000506137 C5orf56Q8N8D9 126 aa5.18□□□□□ -1.58
HTT-203ENST00000506137 SMIM11BQ8TCY0 68 aa5.18□□□□□ -1.58
HTT-203ENST00000506137 Q96NJ1 140 aa5.18□□□□□ -1.58
HTT-203ENST00000506137 R4GN34 69 aa5.18□□□□□ -1.58
HTT-203ENST00000506137 KMT2AQ03164 3969 aa5.18□□□□□ -1.58
HTT-203ENST00000506137 LINC00158P58513 81 aa5.17□□□□□ -1.58
HTT-203ENST00000506137 STARD9Q9P2P6 4700 aa5.17□□□□□ -1.58
HTT-203ENST00000506137 IGFL4Q6B9Z1 124 aa5.16□□□□□ -1.58
HTT-203ENST00000506137 ANAPC11Q9NYG5 84 aa5.16□□□□□ -1.58
HTT-203ENST00000506137 KRTAP9-9Q9BYP9 154 aa5.15□□□□□ -1.59
HTT-203ENST00000506137 KRTAP9-4Q9BYQ2 154 aa5.15□□□□□ -1.59
HTT-203ENST00000506137 KRTAP3-1Q9BYR8 98 aa5.15□□□□□ -1.59
HTT-203ENST00000506137 ACYP2P14621 99 aa5.13□□□□□ -1.59
HTT-203ENST00000506137 CRIP1P50238 77 aa5.13□□□□□ -1.59
HTT-203ENST00000506137 Q6ZQY7 126 aa5.13□□□□□ -1.59
HTT-203ENST00000506137 DEFB108AA8MXU0 73 aa5.11□□□□□ -1.59
HTT-203ENST00000506137 H3BSH0 61 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms