RNA–Protein interactions for RNA: ENST00000506137.1

HTT-203, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-203ENST00000506137 AEBP2Q6ZN18 517 aaPredicted RBP19.47■□□□□ 0.71
HTT-203ENST00000506137 CHIC1Q5VXU3 224 aa18.94■□□□□ 0.62
HTT-203ENST00000506137 SLC24A1O60721 1099 aa17.77■□□□□ 0.44
HTT-203ENST00000506137 MYT1Q01538 1121 aa16.71■□□□□ 0.27
HTT-203ENST00000506137 TTBK1Q5TCY1 1321 aaPredicted RBP16.69■□□□□ 0.26
HTT-203ENST00000506137 SENP3Q9H4L4 574 aaPredicted RBP16.64■□□□□ 0.25
HTT-203ENST00000506137 PHF23Q9BUL5 403 aaPredicted RBP16.59■□□□□ 0.25
HTT-203ENST00000506137 DAXXQ9UER7 740 aaPredicted RBP16.46■□□□□ 0.23
HTT-203ENST00000506137 DNAJC5Q9H3Z4 198 aa16.44■□□□□ 0.22
HTT-203ENST00000506137 DNAJC5BQ9UF47 199 aa16.44■□□□□ 0.22
HTT-203ENST00000506137 PELP1Q8IZL8 1130 aaKnown RBP16.24■□□□□ 0.19
HTT-203ENST00000506137 NCBP3Q53F19 620 aaKnown RBP15.98■□□□□ 0.15
HTT-203ENST00000506137 ABCC9O60706 1549 aa15.97■□□□□ 0.15
HTT-203ENST00000506137 ERICH6Q7L0X2 663 aa15.94■□□□□ 0.14
HTT-203ENST00000506137 EHMT2Q96KQ7 1210 aa15.91■□□□□ 0.14
HTT-203ENST00000506137 APLP2Q06481 763 aa15.79■□□□□ 0.12
HTT-203ENST00000506137 AMER1Q5JTC6 1135 aaPredicted RBP15.74■□□□□ 0.11
HTT-203ENST00000506137 ARXQ96QS3 562 aa15.59■□□□□ 0.09
HTT-203ENST00000506137 RTN4Q9NQC3 1192 aaKnown RBP15.58■□□□□ 0.08
HTT-203ENST00000506137 FOXD1Q16676 465 aa15.4■□□□□ 0.06
HTT-203ENST00000506137 PLPPR3Q6T4P5 718 aa15.38■□□□□ 0.05
HTT-203ENST00000506137 NISCHQ9Y2I1 1504 aa15.33■□□□□ 0.05
HTT-203ENST00000506137 PRKCSHP14314 528 aaPredicted RBP15.33■□□□□ 0.04
HTT-203ENST00000506137 RANGAP1P46060 587 aaPredicted RBP15.3■□□□□ 0.04
HTT-203ENST00000506137 HOMEZQ8IX15 550 aa15□□□□□ -0.01
HTT-203ENST00000506137 TRIM41Q8WV44 630 aa14.95□□□□□ -0.02
HTT-203ENST00000506137 KCNA4P22459 653 aa14.89□□□□□ -0.03
HTT-203ENST00000506137 CSRNP3Q8WYN3 585 aa14.83□□□□□ -0.04
HTT-203ENST00000506137 TIMELESSQ9UNS1 1208 aa14.82□□□□□ -0.04
HTT-203ENST00000506137 BCANQ96GW7 911 aa14.78□□□□□ -0.04
HTT-203ENST00000506137 EIF5BO60841 1220 aaKnown RBP14.76□□□□□ -0.05
HTT-203ENST00000506137 TAOK2Q9UL54 1235 aa14.74□□□□□ -0.05
HTT-203ENST00000506137 ADRA2BP18089 450 aa14.71□□□□□ -0.05
HTT-203ENST00000506137 PPP6R1Q9UPN7 881 aa14.69□□□□□ -0.06
HTT-203ENST00000506137 TULP1O00294 542 aaPredicted RBP14.65□□□□□ -0.06
HTT-203ENST00000506137 CECR2Q9BXF3 1484 aa14.6□□□□□ -0.07
HTT-203ENST00000506137 CUX2O14529 1486 aa14.57□□□□□ -0.08
HTT-203ENST00000506137 PIAS4Q8N2W9 510 aaPredicted RBP14.57□□□□□ -0.08
HTT-203ENST00000506137 RB1CC1Q8TDY2 1594 aa14.56□□□□□ -0.08
HTT-203ENST00000506137 PABPN1Q86U42 306 aaKnown RBP eCLIP14.54□□□□□ -0.08
HTT-203ENST00000506137 CCDC180Q9P1Z9 1646 aa14.46□□□□□ -0.09
HTT-203ENST00000506137 PODXL2Q9NZ53 605 aa14.43□□□□□ -0.1
HTT-203ENST00000506137 CC2D2AQ9P2K1 1620 aa14.41□□□□□ -0.1
HTT-203ENST00000506137 TPRNQ4KMQ1 711 aa14.39□□□□□ -0.11
HTT-203ENST00000506137 ILDR1Q86SU0 546 aaPredicted RBP14.38□□□□□ -0.11
HTT-203ENST00000506137 FBXO3Q9UK99 471 aa14.38□□□□□ -0.11
HTT-203ENST00000506137 GTF3C3Q9Y5Q9 886 aa14.38□□□□□ -0.11
HTT-203ENST00000506137 MSH5O43196 834 aa14.33□□□□□ -0.12
HTT-203ENST00000506137 KLHL34Q8N239 644 aa14.31□□□□□ -0.12
HTT-203ENST00000506137 PLCB2Q00722 1185 aa14.27□□□□□ -0.13
HTT-203ENST00000506137 NPM2Q86SE8 214 aaKnown RBP14.25□□□□□ -0.13
HTT-203ENST00000506137 UNC13AQ9UPW8 1703 aa14.24□□□□□ -0.13
HTT-203ENST00000506137 DCAF8L2P0C7V8 631 aa14.2□□□□□ -0.14
HTT-203ENST00000506137 SLC4A1APQ9BWU0 796 aaKnown RBP14.16□□□□□ -0.14
HTT-203ENST00000506137 BICRAQ9NZM4 1560 aa14.14□□□□□ -0.15
HTT-203ENST00000506137 HAP1P54257 671 aaPredicted RBP14.05□□□□□ -0.16
HTT-203ENST00000506137 NACADO15069 1562 aa14.04□□□□□ -0.16
HTT-203ENST00000506137 TMEM132AQ24JP5 1023 aa14.02□□□□□ -0.17
HTT-203ENST00000506137 VSIG10Q8N0Z9 540 aa14.02□□□□□ -0.17
HTT-203ENST00000506137 C14orf37Q86TY3 774 aa13.99□□□□□ -0.17
HTT-203ENST00000506137 ERCC6Q03468 1493 aa13.96□□□□□ -0.17
HTT-203ENST00000506137 EIF4G1Q04637 1599 aaKnown RBP13.95□□□□□ -0.18
HTT-203ENST00000506137 BCL11AQ9H165 835 aa13.9□□□□□ -0.18
HTT-203ENST00000506137 SHROOM4Q9ULL8 1493 aa13.87□□□□□ -0.19
HTT-203ENST00000506137 CDK11AQ9UQ88 783 aaPredicted RBP13.84□□□□□ -0.19
HTT-203ENST00000506137 HMGB1P09429 215 aaKnown RBP13.8□□□□□ -0.2
HTT-203ENST00000506137 TRHP20396 242 aaPredicted RBP13.73□□□□□ -0.21
HTT-203ENST00000506137 PLEKHG5O94827 1062 aa13.7□□□□□ -0.22
HTT-203ENST00000506137 PDIA4P13667 645 aaKnown RBP13.65□□□□□ -0.22
HTT-203ENST00000506137 TRIM26Q12899 539 aaPredicted RBP13.64□□□□□ -0.23
HTT-203ENST00000506137 CDK11BP21127 795 aaKnown RBP13.6□□□□□ -0.23
HTT-203ENST00000506137 RIMBP3CA6NJZ7 1639 aa13.6□□□□□ -0.23
HTT-203ENST00000506137 RIMBP3BA6NNM3 1639 aa13.6□□□□□ -0.23
HTT-203ENST00000506137 RIMBP3Q9UFD9 1639 aa13.6□□□□□ -0.23
HTT-203ENST00000506137 UBE2Q2Q8WVN8 375 aa13.58□□□□□ -0.24
HTT-203ENST00000506137 SOCS7O14512 581 aa13.56□□□□□ -0.24
HTT-203ENST00000506137 SCAF1Q9H7N4 1312 aaKnown RBP13.56□□□□□ -0.24
HTT-203ENST00000506137 OSCARQ8IYS5 282 aa13.55□□□□□ -0.24
HTT-203ENST00000506137 LMTK3Q96Q04 1460 aa13.55□□□□□ -0.24
HTT-203ENST00000506137 THOC2Q8NI27 1593 aaKnown RBP13.52□□□□□ -0.25
HTT-203ENST00000506137 BAZ1AQ9NRL2 1556 aaPredicted RBP13.51□□□□□ -0.25
HTT-203ENST00000506137 NEFLP07196 543 aa13.51□□□□□ -0.25
HTT-203ENST00000506137 PPP4R3CPQ6ZMV5 832 aa13.51□□□□□ -0.25
HTT-203ENST00000506137 CNKSR2Q8WXI2 1034 aa13.51□□□□□ -0.25
HTT-203ENST00000506137 HSP90B1P14625 803 aaKnown RBP13.47□□□□□ -0.25
HTT-203ENST00000506137 BRD2P25440 801 aaKnown RBP13.47□□□□□ -0.25
HTT-203ENST00000506137 LOC105371045A0A1W2PR82 267 aa13.43□□□□□ -0.26
HTT-203ENST00000506137 TAF7LQ5H9L4 462 aa13.42□□□□□ -0.26
HTT-203ENST00000506137 SUPT5HO00267 1087 aaKnown RBP13.41□□□□□ -0.26
HTT-203ENST00000506137 HRCP23327 699 aa13.4□□□□□ -0.26
HTT-203ENST00000506137 CCDC9Q9Y3X0 531 aaKnown RBP13.39□□□□□ -0.27
HTT-203ENST00000506137 FAM9AQ8IZU1 332 aaPredicted RBP13.38□□□□□ -0.27
HTT-203ENST00000506137 MAPK8IP2Q13387 824 aaPredicted RBP13.37□□□□□ -0.27
HTT-203ENST00000506137 ARHGEF11O15085 1522 aa13.36□□□□□ -0.27
HTT-203ENST00000506137 FBXO41Q8TF61 875 aa13.35□□□□□ -0.27
HTT-203ENST00000506137 CHMP4AQ9BY43 222 aa13.35□□□□□ -0.27
HTT-203ENST00000506137 KDM2AQ9Y2K7 1162 aa13.35□□□□□ -0.27
HTT-203ENST00000506137 UBTFP17480 764 aaKnown RBP13.34□□□□□ -0.27
HTT-203ENST00000506137 PDE4CQ08493 712 aa13.34□□□□□ -0.27
HTT-203ENST00000506137 FKBP8Q14318 412 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms