RNA–Protein interactions for RNA: ENST00000506089.1

SMARCAD1-205, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 4

Gene SMARCAD1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-205ENST00000506089 SPG11Q96JI7 2443 aa0.66□□□□□ -2.3
SMARCAD1-205ENST00000506089 RALGAPBQ86X10 1494 aa0.66□□□□□ -2.3
SMARCAD1-205ENST00000506089 CENPFP49454 3210 aa0.66□□□□□ -2.3
SMARCAD1-205ENST00000506089 AKAP6Q13023 2319 aa0.65□□□□□ -2.3
SMARCAD1-205ENST00000506089 ERICH3Q5RHP9 1530 aa0.65□□□□□ -2.31
SMARCAD1-205ENST00000506089 LRBAP50851 2863 aa0.65□□□□□ -2.31
SMARCAD1-205ENST00000506089 CFAP54Q96N23 3096 aa0.65□□□□□ -2.31
SMARCAD1-205ENST00000506089 PCLOQ9Y6V0 5065 aa0.65□□□□□ -2.31
SMARCAD1-205ENST00000506089 C4AP0C0L4 1744 aa0.65□□□□□ -2.31
SMARCAD1-205ENST00000506089 C4BP0C0L5 1744 aa0.65□□□□□ -2.31
SMARCAD1-205ENST00000506089 ATXN8Q156A1 80 aa0.65□□□□□ -2.31
SMARCAD1-205ENST00000506089 ASPMQ8IZT6 3477 aa0.65□□□□□ -2.31
SMARCAD1-205ENST00000506089 SPTBN4Q9H254 2564 aa0.65□□□□□ -2.31
SMARCAD1-205ENST00000506089 NBEAL1Q6ZS30 2694 aa0.65□□□□□ -2.31
SMARCAD1-205ENST00000506089 ZANQ9Y493 2812 aa0.65□□□□□ -2.31
SMARCAD1-205ENST00000506089 RYR1P21817 5038 aa0.64□□□□□ -2.31
SMARCAD1-205ENST00000506089 CNOT1A5YKK6 2376 aaKnown RBP0.64□□□□□ -2.31
SMARCAD1-205ENST00000506089 TEX15Q9BXT5 2789 aa0.64□□□□□ -2.31
SMARCAD1-205ENST00000506089 CHD9Q3L8U1 2897 aa0.64□□□□□ -2.31
SMARCAD1-205ENST00000506089 NRAPQ86VF7 1730 aa0.64□□□□□ -2.31
SMARCAD1-205ENST00000506089 SMIM31A0A1B0GVY4 71 aa0.64□□□□□ -2.31
SMARCAD1-205ENST00000506089 INO80Q9ULG1 1556 aaPredicted RBP0.64□□□□□ -2.31
SMARCAD1-205ENST00000506089 MYO9AB2RTY4 2548 aa0.64□□□□□ -2.31
SMARCAD1-205ENST00000506089 HFM1A2PYH4 1435 aa0.64□□□□□ -2.31
SMARCAD1-205ENST00000506089 RELNP78509 3460 aa0.63□□□□□ -2.31
SMARCAD1-205ENST00000506089 THOC2Q8NI27 1593 aaKnown RBP0.63□□□□□ -2.31
SMARCAD1-205ENST00000506089 SYNE2Q8WXH0 6885 aaKnown RBP0.63□□□□□ -2.31
SMARCAD1-205ENST00000506089 OTOGQ6ZRI0 2925 aa0.63□□□□□ -2.31
SMARCAD1-205ENST00000506089 MXRA5Q9NR99 2828 aa0.63□□□□□ -2.31
SMARCAD1-205ENST00000506089 HIVEP3Q5T1R4 2406 aa0.63□□□□□ -2.31
SMARCAD1-205ENST00000506089 GVINP1Q7Z2Y8 2422 aa0.63□□□□□ -2.31
SMARCAD1-205ENST00000506089 CREBBPQ92793 2442 aa0.63□□□□□ -2.31
SMARCAD1-205ENST00000506089 AKAP13Q12802 2813 aa0.62□□□□□ -2.31
SMARCAD1-205ENST00000506089 TJP1Q07157 1748 aa0.62□□□□□ -2.31
SMARCAD1-205ENST00000506089 HILPDAQ9Y5L2 63 aa0.62□□□□□ -2.31
SMARCAD1-205ENST00000506089 MADDQ8WXG6 1647 aa0.62□□□□□ -2.31
SMARCAD1-205ENST00000506089 PCNX1Q96RV3 2341 aa0.62□□□□□ -2.31
SMARCAD1-205ENST00000506089 DIP2AQ14689 1571 aa0.62□□□□□ -2.31
SMARCAD1-205ENST00000506089 WDR87Q6ZQQ6 2873 aa0.61□□□□□ -2.31
SMARCAD1-205ENST00000506089 BRCA2P51587 3418 aa0.61□□□□□ -2.31
SMARCAD1-205ENST00000506089 NDUFA3O95167 84 aa0.61□□□□□ -2.31
SMARCAD1-205ENST00000506089 LELP1Q5T871 98 aa0.61□□□□□ -2.31
SMARCAD1-205ENST00000506089 WFDC13Q8IUB5 93 aa0.61□□□□□ -2.31
SMARCAD1-205ENST00000506089 GNG13Q9P2W3 67 aa0.61□□□□□ -2.31
SMARCAD1-205ENST00000506089 CEP250Q9BV73 2442 aa0.61□□□□□ -2.31
SMARCAD1-205ENST00000506089 ANK2Q01484 3957 aa0.61□□□□□ -2.31
SMARCAD1-205ENST00000506089 CCDC180Q9P1Z9 1646 aa0.6□□□□□ -2.31
SMARCAD1-205ENST00000506089 UTRNP46939 3433 aa0.6□□□□□ -2.31
SMARCAD1-205ENST00000506089 CEP290O15078 2479 aa0.6□□□□□ -2.31
SMARCAD1-205ENST00000506089 UBL5Q9BZL1 73 aa0.6□□□□□ -2.31
SMARCAD1-205ENST00000506089 EP300Q09472 2414 aaPredicted RBP0.6□□□□□ -2.31
SMARCAD1-205ENST00000506089 USP9YO00507 2555 aaPredicted RBP0.6□□□□□ -2.31
SMARCAD1-205ENST00000506089 IGF2RP11717 2491 aa0.6□□□□□ -2.31
SMARCAD1-205ENST00000506089 COL12A1Q99715 3063 aa0.6□□□□□ -2.31
SMARCAD1-205ENST00000506089 AHNAKQ09666 5890 aaKnown RBP0.6□□□□□ -2.31
SMARCAD1-205ENST00000506089 FRYLO94915 3013 aa0.59□□□□□ -2.31
SMARCAD1-205ENST00000506089 DCHS1Q96JQ0 3298 aa0.59□□□□□ -2.31
SMARCAD1-205ENST00000506089 MUC5BQ9HC84 5762 aaPredicted RBP0.59□□□□□ -2.31
SMARCAD1-205ENST00000506089 MRPL33O75394 65 aaKnown RBP0.59□□□□□ -2.31
SMARCAD1-205ENST00000506089 C3orf79P0CE67 100 aa0.59□□□□□ -2.31
SMARCAD1-205ENST00000506089 PRO3102Q9H379 93 aa0.59□□□□□ -2.31
SMARCAD1-205ENST00000506089 RNF17Q9BXT8 1623 aaKnown RBP0.59□□□□□ -2.32
SMARCAD1-205ENST00000506089 SPTAN1Q13813 2472 aaKnown RBP0.59□□□□□ -2.32
SMARCAD1-205ENST00000506089 PRRC2CQ9Y520 2896 aaKnown RBP0.59□□□□□ -2.32
SMARCAD1-205ENST00000506089 BSNQ9UPA5 3926 aa0.58□□□□□ -2.32
SMARCAD1-205ENST00000506089 HYDINQ4G0P3 5121 aa0.58□□□□□ -2.32
SMARCAD1-205ENST00000506089 LOC400499M0QZD8 3231 aa0.58□□□□□ -2.32
SMARCAD1-205ENST00000506089 A0A087WWC5 75 aa0.58□□□□□ -2.32
SMARCAD1-205ENST00000506089 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
SMARCAD1-205ENST00000506089 ENHOQ6UWT2 76 aa0.58□□□□□ -2.32
SMARCAD1-205ENST00000506089 KCNQ1DNQ9H478 68 aa0.58□□□□□ -2.32
SMARCAD1-205ENST00000506089 FAM186AA6NE01 2351 aa0.58□□□□□ -2.32
SMARCAD1-205ENST00000506089 TENM2Q9NT68 2774 aa0.58□□□□□ -2.32
SMARCAD1-205ENST00000506089 CSMD1Q96PZ7 3565 aa0.58□□□□□ -2.32
SMARCAD1-205ENST00000506089 WNK2Q9Y3S1 2297 aa0.58□□□□□ -2.32
SMARCAD1-205ENST00000506089 ZFYVE26Q68DK2 2539 aa0.58□□□□□ -2.32
SMARCAD1-205ENST00000506089 TLN1Q9Y490 2541 aaKnown RBP0.58□□□□□ -2.32
SMARCAD1-205ENST00000506089 TGP01266 2768 aa0.57□□□□□ -2.32
SMARCAD1-205ENST00000506089 FRYQ5TBA9 3013 aa0.57□□□□□ -2.32
SMARCAD1-205ENST00000506089 NIPBLQ6KC79 2804 aaeCLIP0.57□□□□□ -2.32
SMARCAD1-205ENST00000506089 DEPDC5O75140 1603 aa0.57□□□□□ -2.32
SMARCAD1-205ENST00000506089 SPTBN5Q9NRC6 3674 aaKnown RBP0.57□□□□□ -2.32
SMARCAD1-205ENST00000506089 GOLGB1Q14789 3259 aaKnown RBP0.57□□□□□ -2.32
SMARCAD1-205ENST00000506089 CSMD3Q7Z407 3707 aa0.57□□□□□ -2.32
SMARCAD1-205ENST00000506089 DEFB131BA0A096LNP1 70 aa0.57□□□□□ -2.32
SMARCAD1-205ENST00000506089 PLXNC1O60486 1568 aa0.57□□□□□ -2.32
SMARCAD1-205ENST00000506089 MGAM2Q2M2H8 2515 aa0.57□□□□□ -2.32
SMARCAD1-205ENST00000506089 NEBP20929 6669 aa0.57□□□□□ -2.32
SMARCAD1-205ENST00000506089 RYR3Q15413 4870 aa0.56□□□□□ -2.32
SMARCAD1-205ENST00000506089 KMT2CQ8NEZ4 4911 aaKnown RBP0.56□□□□□ -2.32
SMARCAD1-205ENST00000506089 MGAQ8IWI9 3026 aa0.56□□□□□ -2.32
SMARCAD1-205ENST00000506089 TRIOO75962 3097 aa0.56□□□□□ -2.32
SMARCAD1-205ENST00000506089 MAP1AP78559 2803 aaPredicted RBP0.56□□□□□ -2.32
SMARCAD1-205ENST00000506089 DCHS2Q6V1P9 2916 aa0.56□□□□□ -2.32
SMARCAD1-205ENST00000506089 LAMA3Q16787 3333 aa0.56□□□□□ -2.32
SMARCAD1-205ENST00000506089 DSPP15924 2871 aaKnown RBP0.55□□□□□ -2.32
SMARCAD1-205ENST00000506089 EPPK1P58107 5090 aaKnown RBP0.55□□□□□ -2.32
SMARCAD1-205ENST00000506089 BIRC6Q9NR09 4857 aa0.55□□□□□ -2.32
SMARCAD1-205ENST00000506089 ATMQ13315 3056 aa0.55□□□□□ -2.32
SMARCAD1-205ENST00000506089 RYR2Q92736 4967 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms