RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 IAPPP10997 89 aa0.17□□□□□ -2.38
SUB1-204ENST00000504016 SPRR2BP35325 72 aa0.17□□□□□ -2.38
SUB1-204ENST00000504016 WIZO95785 1651 aa0.17□□□□□ -2.38
SUB1-204ENST00000504016 ZANQ9Y493 2812 aa0.17□□□□□ -2.38
SUB1-204ENST00000504016 NBEAL1Q6ZS30 2694 aa0.17□□□□□ -2.38
SUB1-204ENST00000504016 LPAP08519 4548 aa0.17□□□□□ -2.38
SUB1-204ENST00000504016 DDX60LQ5H9U9 1706 aaKnown RBP0.16□□□□□ -2.38
SUB1-204ENST00000504016 MYO5CQ9NQX4 1742 aa0.16□□□□□ -2.38
SUB1-204ENST00000504016 PLXNC1O60486 1568 aa0.16□□□□□ -2.38
SUB1-204ENST00000504016 H0YAA0 97 aa0.16□□□□□ -2.38
SUB1-204ENST00000504016 NCBP2-AS2Q69YL0 99 aa0.16□□□□□ -2.38
SUB1-204ENST00000504016 SMIM5Q71RC9 77 aa0.16□□□□□ -2.38
SUB1-204ENST00000504016 ZNF831Q5JPB2 1677 aa0.16□□□□□ -2.38
SUB1-204ENST00000504016 EFCAB5A4FU69 1503 aa0.16□□□□□ -2.38
SUB1-204ENST00000504016 ASXL1Q8IXJ9 1541 aa0.16□□□□□ -2.38
SUB1-204ENST00000504016 SYNE2Q8WXH0 6885 aaKnown RBP0.16□□□□□ -2.38
SUB1-204ENST00000504016 EIF2AK4Q9P2K8 1649 aaKnown RBP0.16□□□□□ -2.38
SUB1-204ENST00000504016 BPTFQ12830 3046 aa0.16□□□□□ -2.38
SUB1-204ENST00000504016 DIP2AQ14689 1571 aa0.15□□□□□ -2.38
SUB1-204ENST00000504016 CDC42BPGQ6DT37 1551 aa0.15□□□□□ -2.38
SUB1-204ENST00000504016 MAP1AP78559 2803 aaPredicted RBP0.15□□□□□ -2.38
SUB1-204ENST00000504016 PLCH1Q4KWH8 1693 aa0.15□□□□□ -2.39
SUB1-204ENST00000504016 MYCBP2O75592 4640 aa0.15□□□□□ -2.39
SUB1-204ENST00000504016 CRIP1P50238 77 aa0.15□□□□□ -2.39
SUB1-204ENST00000504016 EPG5Q9HCE0 2579 aa0.15□□□□□ -2.39
SUB1-204ENST00000504016 RICTORQ6R327 1708 aa0.15□□□□□ -2.39
SUB1-204ENST00000504016 NBASA2RRP1 2371 aa0.14□□□□□ -2.39
SUB1-204ENST00000504016 C4AP0C0L4 1744 aa0.14□□□□□ -2.39
SUB1-204ENST00000504016 C4BP0C0L5 1744 aa0.14□□□□□ -2.39
SUB1-204ENST00000504016 C9orf92A6NGG3 77 aa0.14□□□□□ -2.39
SUB1-204ENST00000504016 LINC01549A6NIU2 74 aa0.14□□□□□ -2.39
SUB1-204ENST00000504016 DEFB130BP0DP73 79 aa0.14□□□□□ -2.39
SUB1-204ENST00000504016 DEFB130AP0DP74 79 aa0.14□□□□□ -2.39
SUB1-204ENST00000504016 MINOS1Q5TGZ0 78 aa0.14□□□□□ -2.39
SUB1-204ENST00000504016 NMES1Q9C002 83 aa0.14□□□□□ -2.39
SUB1-204ENST00000504016 ADAMTS12P58397 1594 aa0.14□□□□□ -2.39
SUB1-204ENST00000504016 NHSQ6T4R5 1651 aa0.14□□□□□ -2.39
SUB1-204ENST00000504016 FSIP2Q5CZC0 6907 aa0.14□□□□□ -2.39
SUB1-204ENST00000504016 SETD2Q9BYW2 2564 aaPredicted RBP0.13□□□□□ -2.39
SUB1-204ENST00000504016 COL6A3P12111 3177 aa0.13□□□□□ -2.39
SUB1-204ENST00000504016 H3BUA1 57 aa0.13□□□□□ -2.39
SUB1-204ENST00000504016 PRLHP81277 87 aa0.13□□□□□ -2.39
SUB1-204ENST00000504016 DNMBPQ6XZF7 1577 aa0.13□□□□□ -2.39
SUB1-204ENST00000504016 INO80Q9ULG1 1556 aaPredicted RBP0.13□□□□□ -2.39
SUB1-204ENST00000504016 SPG11Q96JI7 2443 aa0.13□□□□□ -2.39
SUB1-204ENST00000504016 ITSN1Q15811 1721 aa0.13□□□□□ -2.39
SUB1-204ENST00000504016 IQGAP3Q86VI3 1631 aa0.13□□□□□ -2.39
SUB1-204ENST00000504016 KIAA0586Q9BVV6 1533 aa0.13□□□□□ -2.39
SUB1-204ENST00000504016 TGP01266 2768 aa0.12□□□□□ -2.39
SUB1-204ENST00000504016 PKD1L2Q7Z442 2459 aa0.12□□□□□ -2.39
SUB1-204ENST00000504016 ALMS1Q8TCU4 4167 aa0.12□□□□□ -2.39
SUB1-204ENST00000504016 HECTD4Q9Y4D8 3996 aa0.12□□□□□ -2.39
SUB1-204ENST00000504016 SPRR2GQ9BYE4 73 aa0.12□□□□□ -2.39
SUB1-204ENST00000504016 TIMM8BQ9Y5J9 83 aaPredicted RBP0.12□□□□□ -2.39
SUB1-204ENST00000504016 LRRIQ1Q96JM4 1722 aa0.12□□□□□ -2.39
SUB1-204ENST00000504016 TNRC18O15417 2968 aaPredicted RBP0.12□□□□□ -2.39
SUB1-204ENST00000504016 HSPG2P98160 4391 aa0.11□□□□□ -2.39
SUB1-204ENST00000504016 UTP20O75691 2785 aaKnown RBP0.11□□□□□ -2.39
SUB1-204ENST00000504016 STAB1Q9NY15 2570 aa0.11□□□□□ -2.39
SUB1-204ENST00000504016 ABCC6O95255 1503 aa0.11□□□□□ -2.39
SUB1-204ENST00000504016 CEP290O15078 2479 aa0.11□□□□□ -2.39
SUB1-204ENST00000504016 ANKRD11Q6UB99 2663 aaPredicted RBP0.1□□□□□ -2.39
SUB1-204ENST00000504016 ABCA9Q8IUA7 1624 aa0.1□□□□□ -2.39
SUB1-204ENST00000504016 WT1-ASQ06250 92 aa0.1□□□□□ -2.39
SUB1-204ENST00000504016 C6orf48Q9UBA6 75 aa0.1□□□□□ -2.39
SUB1-204ENST00000504016 PDZD2O15018 2839 aa0.1□□□□□ -2.39
SUB1-204ENST00000504016 HIVEP1P15822 2718 aa0.1□□□□□ -2.39
SUB1-204ENST00000504016 MTORP42345 2549 aa0.1□□□□□ -2.39
SUB1-204ENST00000504016 ZZEF1O43149 2961 aa0.09□□□□□ -2.39
SUB1-204ENST00000504016 SPTBN4Q9H254 2564 aa0.09□□□□□ -2.39
SUB1-204ENST00000504016 TJP1Q07157 1748 aa0.09□□□□□ -2.4
SUB1-204ENST00000504016 MROH1Q8NDA8 1641 aa0.09□□□□□ -2.4
SUB1-204ENST00000504016 RNF17Q9BXT8 1623 aaKnown RBP0.09□□□□□ -2.4
SUB1-204ENST00000504016 LRRK2Q5S007 2527 aa0.09□□□□□ -2.4
SUB1-204ENST00000504016 ZC3H13Q5T200 1668 aaKnown RBP0.08□□□□□ -2.4
SUB1-204ENST00000504016 ERICH3Q5RHP9 1530 aa0.08□□□□□ -2.4
SUB1-204ENST00000504016 NBEAQ8NFP9 2946 aa0.08□□□□□ -2.4
SUB1-204ENST00000504016 NRAPQ86VF7 1730 aa0.08□□□□□ -2.4
SUB1-204ENST00000504016 H3BNG1 76 aa0.08□□□□□ -2.4
SUB1-204ENST00000504016 SFTA3P0C7M3 94 aa0.08□□□□□ -2.4
SUB1-204ENST00000504016 FCER1GP30273 86 aa0.08□□□□□ -2.4
SUB1-204ENST00000504016 SPRR2AP35326 72 aa0.08□□□□□ -2.4
SUB1-204ENST00000504016 DEFB106AQ8N104 65 aa0.08□□□□□ -2.4
SUB1-204ENST00000504016 TMEM167BQ9NRX6 74 aa0.08□□□□□ -2.4
SUB1-204ENST00000504016 HMCN2Q8NDA2 5059 aa0.08□□□□□ -2.4
SUB1-204ENST00000504016 MXRA5Q9NR99 2828 aa0.07□□□□□ -2.4
SUB1-204ENST00000504016 LRP2P98164 4655 aa0.07□□□□□ -2.4
SUB1-204ENST00000504016 NOP10Q9NPE3 64 aaKnown RBP0.07□□□□□ -2.4
SUB1-204ENST00000504016 S4R3F8 94 aa0.07□□□□□ -2.4
SUB1-204ENST00000504016 LYSTQ99698 3801 aa0.07□□□□□ -2.4
SUB1-204ENST00000504016 PARP4Q9UKK3 1724 aaKnown RBP0.07□□□□□ -2.4
SUB1-204ENST00000504016 TACC2O95359 2948 aa0.07□□□□□ -2.4
SUB1-204ENST00000504016 M0R1W7 72 aa0.06□□□□□ -2.4
SUB1-204ENST00000504016 ABRACLQ9P1F3 81 aa0.06□□□□□ -2.4
SUB1-204ENST00000504016 GCN1Q92616 2671 aaKnown RBP0.06□□□□□ -2.4
SUB1-204ENST00000504016 HTTP42858 3142 aa0.06□□□□□ -2.4
SUB1-204ENST00000504016 FASNP49327 2511 aaKnown RBP0.06□□□□□ -2.4
SUB1-204ENST00000504016 DMXL1Q9Y485 3027 aa0.05□□□□□ -2.4
SUB1-204ENST00000504016 SSPOA2VEC9 5147 aa0.05□□□□□ -2.4
SUB1-204ENST00000504016 C3P01024 1663 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms