RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 GAGE2AQ6NT46 116 aa4.95□□□□□ -1.62
TOPBP1-202ENST00000503338 SPRR4Q96PI1 79 aa4.95□□□□□ -1.62
TOPBP1-202ENST00000503338 C14orf132Q9NPU4 83 aa4.95□□□□□ -1.62
TOPBP1-202ENST00000503338 FAT2Q9NYQ8 4349 aa4.95□□□□□ -1.62
TOPBP1-202ENST00000503338 IGLV8-61A0A075B6I0 122 aa4.94□□□□□ -1.62
TOPBP1-202ENST00000503338 TRBV7-4A0A0J9YYF1 115 aa4.94□□□□□ -1.62
TOPBP1-202ENST00000503338 A0A1B0GW54 56 aa4.94□□□□□ -1.62
TOPBP1-202ENST00000503338 CDK2AP2O75956 126 aa4.94□□□□□ -1.62
TOPBP1-202ENST00000503338 CCKP06307 115 aa4.94□□□□□ -1.62
TOPBP1-202ENST00000503338 HAMPP81172 84 aa4.94□□□□□ -1.62
TOPBP1-202ENST00000503338 Q6JHZ5 121 aa4.94□□□□□ -1.62
TOPBP1-202ENST00000503338 Q6ZQT0 140 aa4.93□□□□□ -1.62
TOPBP1-202ENST00000503338 SMIM29Q86T20 159 aa4.93□□□□□ -1.62
TOPBP1-202ENST00000503338 SPINK6Q6UWN8 80 aa4.92□□□□□ -1.62
TOPBP1-202ENST00000503338 A0A1B0GV72 72 aa4.91□□□□□ -1.62
TOPBP1-202ENST00000503338 PLA2G1BP04054 148 aaKnown RBP4.91□□□□□ -1.62
TOPBP1-202ENST00000503338 C3orf22Q8N5N4 141 aa4.91□□□□□ -1.62
TOPBP1-202ENST00000503338 KMT2CQ8NEZ4 4911 aaKnown RBP4.91□□□□□ -1.62
TOPBP1-202ENST00000503338 DNAH11Q96DT5 4516 aa4.91□□□□□ -1.62
TOPBP1-202ENST00000503338 RYR2Q92736 4967 aa4.91□□□□□ -1.62
TOPBP1-202ENST00000503338 FAM229BQ4G0N7 80 aa4.9□□□□□ -1.63
TOPBP1-202ENST00000503338 PKD1P98161 4303 aa4.9□□□□□ -1.63
TOPBP1-202ENST00000503338 DNAH5Q8TE73 4624 aa4.9□□□□□ -1.63
TOPBP1-202ENST00000503338 Q8NBF4 154 aa4.89□□□□□ -1.63
TOPBP1-202ENST00000503338 SMR3BP02814 79 aaPredicted RBP4.88□□□□□ -1.63
TOPBP1-202ENST00000503338 C9orf153Q5TBE3 101 aa4.88□□□□□ -1.63
TOPBP1-202ENST00000503338 Q6Q795 121 aa4.88□□□□□ -1.63
TOPBP1-202ENST00000503338 SSBP3-AS1Q7Z2R9 100 aa4.88□□□□□ -1.63
TOPBP1-202ENST00000503338 VPS25Q9BRG1 176 aa4.88□□□□□ -1.63
TOPBP1-202ENST00000503338 UBL5Q9BZL1 73 aa4.88□□□□□ -1.63
TOPBP1-202ENST00000503338 IGFL1Q6UW32 110 aa4.87□□□□□ -1.63
TOPBP1-202ENST00000503338 DNAH8Q96JB1 4490 aa4.87□□□□□ -1.63
TOPBP1-202ENST00000503338 IGLV9-49A0A0B4J1Y8 123 aa4.86□□□□□ -1.63
TOPBP1-202ENST00000503338 CRYGAP11844 174 aa4.86□□□□□ -1.63
TOPBP1-202ENST00000503338 MOBPQ13875 183 aa4.85□□□□□ -1.63
TOPBP1-202ENST00000503338 LINC00643Q86TS7 51 aa4.85□□□□□ -1.63
TOPBP1-202ENST00000503338 LINC00846Q9NV44 126 aa4.85□□□□□ -1.63
TOPBP1-202ENST00000503338 PKHD1P08F94 4074 aa4.84□□□□□ -1.63
TOPBP1-202ENST00000503338 A0A1W2PNM2 257 aa4.84□□□□□ -1.63
TOPBP1-202ENST00000503338 KRTAP10-4P60372 401 aaPredicted RBP4.84□□□□□ -1.63
TOPBP1-202ENST00000503338 ATP5EP2Q5VTU8 51 aa4.84□□□□□ -1.63
TOPBP1-202ENST00000503338 CDIP1Q9H305 208 aa4.84□□□□□ -1.63
TOPBP1-202ENST00000503338 LRP1BQ9NZR2 4599 aa4.84□□□□□ -1.63
TOPBP1-202ENST00000503338 TRBV7-7A0A0K0K1E9 115 aa4.83□□□□□ -1.64
TOPBP1-202ENST00000503338 KRTAP1-4P0C5Y4 121 aa4.83□□□□□ -1.64
TOPBP1-202ENST00000503338 CD164Q04900 197 aa4.83□□□□□ -1.64
TOPBP1-202ENST00000503338 NREPQ16612 68 aa4.83□□□□□ -1.64
TOPBP1-202ENST00000503338 ANAPC11Q9NYG5 84 aa4.83□□□□□ -1.64
TOPBP1-202ENST00000503338 Q5VSD8 79 aa4.82□□□□□ -1.64
TOPBP1-202ENST00000503338 SIGMAR1Q99720 223 aa4.82□□□□□ -1.64
TOPBP1-202ENST00000503338 SS18L2Q9UHA2 77 aa4.82□□□□□ -1.64
TOPBP1-202ENST00000503338 Q6ZVQ6 151 aa4.81□□□□□ -1.64
TOPBP1-202ENST00000503338 A0A087WSZ3 146 aa4.8□□□□□ -1.64
TOPBP1-202ENST00000503338 A0A087X002 238 aa4.8□□□□□ -1.64
TOPBP1-202ENST00000503338 Q8N1X5 172 aa4.8□□□□□ -1.64
TOPBP1-202ENST00000503338 TYMSOSQ8TAI1 123 aa4.8□□□□□ -1.64
TOPBP1-202ENST00000503338 DYNC1H1Q14204 4646 aaKnown RBP4.79□□□□□ -1.64
TOPBP1-202ENST00000503338 CXCL6P80162 114 aa4.79□□□□□ -1.64
TOPBP1-202ENST00000503338 KRTAP13-2Q52LG2 175 aa4.79□□□□□ -1.64
TOPBP1-202ENST00000503338 IMUPQ9GZP8 106 aa4.79□□□□□ -1.64
TOPBP1-202ENST00000503338 VPS13BQ7Z7G8 4022 aa4.78□□□□□ -1.64
TOPBP1-202ENST00000503338 SPAG11AQ6PDA7 123 aa4.78□□□□□ -1.64
TOPBP1-202ENST00000503338 A0A0G2JQZ4 141 aa4.77□□□□□ -1.65
TOPBP1-202ENST00000503338 BPY2O14599 106 aa4.77□□□□□ -1.65
TOPBP1-202ENST00000503338 Q5XG85 94 aa4.77□□□□□ -1.65
TOPBP1-202ENST00000503338 LIMD2Q9BT23 127 aa4.77□□□□□ -1.65
TOPBP1-202ENST00000503338 J3KT08 172 aa4.76□□□□□ -1.65
TOPBP1-202ENST00000503338 SPINK1P00995 79 aa4.76□□□□□ -1.65
TOPBP1-202ENST00000503338 MT-ATP8P03928 68 aa4.76□□□□□ -1.65
TOPBP1-202ENST00000503338 RPS29P62273 56 aaKnown RBP4.76□□□□□ -1.65
TOPBP1-202ENST00000503338 RYR3Q15413 4870 aa4.76□□□□□ -1.65
TOPBP1-202ENST00000503338 ASB16-AS1Q495Z4 193 aa4.75□□□□□ -1.65
TOPBP1-202ENST00000503338 HRCT1Q6UXD1 115 aa4.75□□□□□ -1.65
TOPBP1-202ENST00000503338 PRR26Q8N8Z3 221 aa4.75□□□□□ -1.65
TOPBP1-202ENST00000503338 LINC00304Q8N9R0 145 aa4.74□□□□□ -1.65
TOPBP1-202ENST00000503338 SRRM2Q9UQ35 2752 aaKnown RBP4.74□□□□□ -1.65
TOPBP1-202ENST00000503338 APOBP04114 4563 aaKnown RBP4.73□□□□□ -1.65
TOPBP1-202ENST00000503338 IGKV3D-7A0A0C4DH55 119 aa4.73□□□□□ -1.65
TOPBP1-202ENST00000503338 LINC00472Q9H8W2 130 aa4.73□□□□□ -1.65
TOPBP1-202ENST00000503338 SCGB1A1P11684 91 aa4.72□□□□□ -1.65
TOPBP1-202ENST00000503338 NDUFB1O75438 58 aa4.71□□□□□ -1.66
TOPBP1-202ENST00000503338 HIST1H4AP62805 103 aaKnown RBP4.71□□□□□ -1.66
TOPBP1-202ENST00000503338 A8MWP4 228 aa4.69□□□□□ -1.66
TOPBP1-202ENST00000503338 OXTP01178 125 aa4.69□□□□□ -1.66
TOPBP1-202ENST00000503338 IGKV4-1P06312 121 aa4.69□□□□□ -1.66
TOPBP1-202ENST00000503338 KRTAP10-8P60410 259 aa4.69□□□□□ -1.66
TOPBP1-202ENST00000503338 DSCR10P59022 87 aa4.68□□□□□ -1.66
TOPBP1-202ENST00000503338 Q96NJ1 140 aa4.68□□□□□ -1.66
TOPBP1-202ENST00000503338 PRR15Q8IV56 129 aa4.67□□□□□ -1.66
TOPBP1-202ENST00000503338 HSPG2P98160 4391 aa4.66□□□□□ -1.66
TOPBP1-202ENST00000503338 K7EQZ3 153 aa4.66□□□□□ -1.66
TOPBP1-202ENST00000503338 DEFB116Q30KQ4 102 aa4.66□□□□□ -1.66
TOPBP1-202ENST00000503338 C1orf195Q5TG92 126 aa4.66□□□□□ -1.66
TOPBP1-202ENST00000503338 FAM236AA0A1B0GUQ0 79 aa4.65□□□□□ -1.67
TOPBP1-202ENST00000503338 FAM236BA0A1B0GV22 79 aa4.65□□□□□ -1.67
TOPBP1-202ENST00000503338 RYR1P21817 5038 aa4.64□□□□□ -1.67
TOPBP1-202ENST00000503338 FAT1Q14517 4588 aa4.64□□□□□ -1.67
TOPBP1-202ENST00000503338 A0A087WVE0 104 aa4.64□□□□□ -1.67
TOPBP1-202ENST00000503338 A0A1B0GVX0 72 aa4.64□□□□□ -1.67
TOPBP1-202ENST00000503338 HCG22E2RYF7 251 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 209.8 ms