RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 Q9BRP9 147 aa9.88□□□□□ -0.83
LMNA-217ENST00000498722 H0Y9J4 135 aa9.87□□□□□ -0.83
LMNA-217ENST00000498722 IGLV7-43P04211 117 aa9.87□□□□□ -0.83
LMNA-217ENST00000498722 LAMTOR3Q9UHA4 124 aa9.86□□□□□ -0.83
LMNA-217ENST00000498722 HERC1Q15751 4861 aa9.86□□□□□ -0.83
LMNA-217ENST00000498722 BCE1O60756 84 aa9.84□□□□□ -0.83
LMNA-217ENST00000498722 UBE2AP49459 152 aa9.83□□□□□ -0.84
LMNA-217ENST00000498722 SMCR5Q8TEV8 140 aa9.83□□□□□ -0.84
LMNA-217ENST00000498722 VPS25Q9BRG1 176 aa9.83□□□□□ -0.84
LMNA-217ENST00000498722 FAM240AA0A1B0GVK7 77 aa9.82□□□□□ -0.84
LMNA-217ENST00000498722 RBM3P98179 157 aaKnown RBP9.82□□□□□ -0.84
LMNA-217ENST00000498722 ACYP1P07311 99 aa9.82□□□□□ -0.84
LMNA-217ENST00000498722 PRLHP81277 87 aa9.82□□□□□ -0.84
LMNA-217ENST00000498722 C14orf132Q9NPU4 83 aa9.82□□□□□ -0.84
LMNA-217ENST00000498722 IGLV5-48A0A075B6I7 105 aa9.81□□□□□ -0.84
LMNA-217ENST00000498722 NDUFV3P56181 108 aaKnown RBP9.81□□□□□ -0.84
LMNA-217ENST00000498722 C21orf62-AS1Q17RA5 79 aa9.81□□□□□ -0.84
LMNA-217ENST00000498722 DEFB105AQ8NG35 78 aa9.8□□□□□ -0.84
LMNA-217ENST00000498722 HIGD2AQ9BW72 106 aa9.8□□□□□ -0.84
LMNA-217ENST00000498722 LRP1Q07954 4544 aaKnown RBP9.79□□□□□ -0.84
LMNA-217ENST00000498722 ERC2-IT1O76042 136 aa9.79□□□□□ -0.84
LMNA-217ENST00000498722 PDE6GP18545 87 aa9.79□□□□□ -0.84
LMNA-217ENST00000498722 LINC01547P58512 204 aaPredicted RBP9.79□□□□□ -0.84
LMNA-217ENST00000498722 Q8N377 158 aa9.79□□□□□ -0.84
LMNA-217ENST00000498722 DSCR8Q96T75 97 aa9.79□□□□□ -0.84
LMNA-217ENST00000498722 LOC110117498A0A087WWA1 95 aa9.77□□□□□ -0.85
LMNA-217ENST00000498722 A0A1B0GV72 72 aa9.77□□□□□ -0.85
LMNA-217ENST00000498722 ZNF861PO60384 105 aa9.77□□□□□ -0.85
LMNA-217ENST00000498722 CCKP06307 115 aa9.77□□□□□ -0.85
LMNA-217ENST00000498722 GAGE2AQ6NT46 116 aa9.77□□□□□ -0.85
LMNA-217ENST00000498722 ST20-AS1Q8NBB2 130 aa9.77□□□□□ -0.85
LMNA-217ENST00000498722 KRTAP13-1Q8IUC0 172 aa9.76□□□□□ -0.85
LMNA-217ENST00000498722 FAT3Q8TDW7 4589 aa9.75□□□□□ -0.85
LMNA-217ENST00000498722 Q6ZQT0 140 aa9.73□□□□□ -0.85
LMNA-217ENST00000498722 CDIP1Q9H305 208 aa9.73□□□□□ -0.85
LMNA-217ENST00000498722 TRBV7-4A0A0J9YYF1 115 aa9.72□□□□□ -0.85
LMNA-217ENST00000498722 MT1HL1P0DM35 61 aa9.72□□□□□ -0.85
LMNA-217ENST00000498722 F8WEM9 126 aa9.71□□□□□ -0.86
LMNA-217ENST00000498722 SPRR1BP22528 89 aa9.7□□□□□ -0.86
LMNA-217ENST00000498722 ZNF706Q9Y5V0 76 aaPredicted RBP9.7□□□□□ -0.86
LMNA-217ENST00000498722 SMIM29Q86T20 159 aa9.67□□□□□ -0.86
LMNA-217ENST00000498722 PRR26Q8N8Z3 221 aa9.67□□□□□ -0.86
LMNA-217ENST00000498722 SIGMAR1Q99720 223 aa9.67□□□□□ -0.86
LMNA-217ENST00000498722 C3orf22Q8N5N4 141 aa9.66□□□□□ -0.86
LMNA-217ENST00000498722 KRTAP1-4P0C5Y4 121 aa9.64□□□□□ -0.87
LMNA-217ENST00000498722 KRTAP10-8P60410 259 aa9.64□□□□□ -0.87
LMNA-217ENST00000498722 SPRR4Q96PI1 79 aa9.63□□□□□ -0.87
LMNA-217ENST00000498722 IGLV8-61A0A075B6I0 122 aa9.62□□□□□ -0.87
LMNA-217ENST00000498722 A0A1B0GW54 56 aa9.62□□□□□ -0.87
LMNA-217ENST00000498722 LINC00643Q86TS7 51 aa9.62□□□□□ -0.87
LMNA-217ENST00000498722 LINC00846Q9NV44 126 aa9.62□□□□□ -0.87
LMNA-217ENST00000498722 LINC00483Q53H64 154 aa9.6□□□□□ -0.87
LMNA-217ENST00000498722 UBL5Q9BZL1 73 aa9.6□□□□□ -0.87
LMNA-217ENST00000498722 Q6JHZ5 121 aa9.59□□□□□ -0.87
LMNA-217ENST00000498722 ANAPC11Q9NYG5 84 aa9.59□□□□□ -0.87
LMNA-217ENST00000498722 MT-ATP8P03928 68 aa9.57□□□□□ -0.88
LMNA-217ENST00000498722 CRYGAP11844 174 aa9.57□□□□□ -0.88
LMNA-217ENST00000498722 TNXBP22105 4242 aa9.57□□□□□ -0.88
LMNA-217ENST00000498722 Q8NBF4 154 aa9.56□□□□□ -0.88
LMNA-217ENST00000498722 A0A087X002 238 aa9.56□□□□□ -0.88
LMNA-217ENST00000498722 IGFL1Q6UW32 110 aa9.56□□□□□ -0.88
LMNA-217ENST00000498722 A0A1W2PNM2 257 aa9.54□□□□□ -0.88
LMNA-217ENST00000498722 ATP5EP2Q5VTU8 51 aa9.54□□□□□ -0.88
LMNA-217ENST00000498722 TYMSOSQ8TAI1 123 aa9.54□□□□□ -0.88
LMNA-217ENST00000498722 FAM229BQ4G0N7 80 aa9.53□□□□□ -0.88
LMNA-217ENST00000498722 Q6Q795 121 aa9.52□□□□□ -0.89
LMNA-217ENST00000498722 IMUPQ9GZP8 106 aa9.52□□□□□ -0.89
LMNA-217ENST00000498722 TRBV7-7A0A0K0K1E9 115 aa9.51□□□□□ -0.89
LMNA-217ENST00000498722 C9orf153Q5TBE3 101 aa9.51□□□□□ -0.89
LMNA-217ENST00000498722 Q6ZVQ6 151 aa9.51□□□□□ -0.89
LMNA-217ENST00000498722 SCGB1A1P11684 91 aa9.5□□□□□ -0.89
LMNA-217ENST00000498722 IGLV9-49A0A0B4J1Y8 123 aa9.49□□□□□ -0.89
LMNA-217ENST00000498722 NREPQ16612 68 aa9.49□□□□□ -0.89
LMNA-217ENST00000498722 KRTAP13-2Q52LG2 175 aa9.48□□□□□ -0.89
LMNA-217ENST00000498722 IGKV3D-7A0A0C4DH55 119 aa9.45□□□□□ -0.9
LMNA-217ENST00000498722 CXCL6P80162 114 aa9.45□□□□□ -0.9
LMNA-217ENST00000498722 MOBPQ13875 183 aa9.44□□□□□ -0.9
LMNA-217ENST00000498722 A0A0G2JQZ4 141 aa9.43□□□□□ -0.9
LMNA-217ENST00000498722 LINC00304Q8N9R0 145 aa9.42□□□□□ -0.9
LMNA-217ENST00000498722 SSBP3-AS1Q7Z2R9 100 aa9.41□□□□□ -0.9
LMNA-217ENST00000498722 A0A087WSZ3 146 aa9.4□□□□□ -0.9
LMNA-217ENST00000498722 HMCN2Q8NDA2 5059 aa9.39□□□□□ -0.91
LMNA-217ENST00000498722 BPY2O14599 106 aa9.38□□□□□ -0.91
LMNA-217ENST00000498722 HIST1H4AP62805 103 aaKnown RBP9.36□□□□□ -0.91
LMNA-217ENST00000498722 CD164Q04900 197 aa9.35□□□□□ -0.91
LMNA-217ENST00000498722 C4orf48Q5BLP8 95 aa9.35□□□□□ -0.91
LMNA-217ENST00000498722 SS18L2Q9UHA2 77 aa9.35□□□□□ -0.91
LMNA-217ENST00000498722 PRR4Q16378 134 aa9.34□□□□□ -0.91
LMNA-217ENST00000498722 HRCT1Q6UXD1 115 aa9.31□□□□□ -0.92
LMNA-217ENST00000498722 UBR4Q5T4S7 5183 aa9.31□□□□□ -0.92
LMNA-217ENST00000498722 FAM236AA0A1B0GUQ0 79 aa9.31□□□□□ -0.92
LMNA-217ENST00000498722 FAM236BA0A1B0GV22 79 aa9.31□□□□□ -0.92
LMNA-217ENST00000498722 SPAG11AQ6PDA7 123 aa9.31□□□□□ -0.92
LMNA-217ENST00000498722 A0A087WVE0 104 aa9.29□□□□□ -0.92
LMNA-217ENST00000498722 PCP4P48539 62 aa9.29□□□□□ -0.92
LMNA-217ENST00000498722 RETNLBQ9BQ08 111 aa9.29□□□□□ -0.92
LMNA-217ENST00000498722 J3KT08 172 aa9.28□□□□□ -0.92
LMNA-217ENST00000498722 LINC00472Q9H8W2 130 aa9.27□□□□□ -0.93
LMNA-217ENST00000498722 IGKV4-1P06312 121 aa9.26□□□□□ -0.93
LMNA-217ENST00000498722 DSCR10P59022 87 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms