RNA–Protein interactions for RNA: ENST00000498562.2

CUL4A-211, Transcript of cullin 4A, humanhuman

TSL 3

Gene CUL4A, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-211ENST00000498562 COX6B2Q6YFQ2 88 aa13.66□□□□□ -0.22
CUL4A-211ENST00000498562 M0R2T5 61 aa13.65□□□□□ -0.22
CUL4A-211ENST00000498562 VAMP3Q15836 100 aa13.65□□□□□ -0.22
CUL4A-211ENST00000498562 Q6ZQY7 126 aa13.65□□□□□ -0.22
CUL4A-211ENST00000498562 SNRPEP62304 92 aaKnown RBP13.64□□□□□ -0.23
CUL4A-211ENST00000498562 Q6JHZ5 121 aa13.62□□□□□ -0.23
CUL4A-211ENST00000498562 hADV29S1A0JD25 119 aa13.61□□□□□ -0.23
CUL4A-211ENST00000498562 IGFL1Q6UW32 110 aa13.61□□□□□ -0.23
CUL4A-211ENST00000498562 CLEC2BQ92478 149 aa13.61□□□□□ -0.23
CUL4A-211ENST00000498562 TRBV7-7A0A0K0K1E9 115 aa13.6□□□□□ -0.23
CUL4A-211ENST00000498562 OCIAD2Q56VL3 154 aa13.54□□□□□ -0.24
CUL4A-211ENST00000498562 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.51□□□□□ -0.25
CUL4A-211ENST00000498562 OBSCN-AS1Q96MR7 158 aa13.51□□□□□ -0.25
CUL4A-211ENST00000498562 Q75L30 129 aa13.5□□□□□ -0.25
CUL4A-211ENST00000498562 HIST3H2BBQ8N257 126 aa13.5□□□□□ -0.25
CUL4A-211ENST00000498562 HSBP1L1C9JCN9 74 aa13.49□□□□□ -0.25
CUL4A-211ENST00000498562 HIST1H2BLQ99880 126 aa13.49□□□□□ -0.25
CUL4A-211ENST00000498562 PPDPFLQ8WWR9 84 aa13.48□□□□□ -0.25
CUL4A-211ENST00000498562 ATP11AUNQ6ZP68 121 aa13.47□□□□□ -0.25
CUL4A-211ENST00000498562 BVES-AS1Q5T3Y7 98 aa13.46□□□□□ -0.25
CUL4A-211ENST00000498562 C12orf57Q99622 126 aa13.46□□□□□ -0.25
CUL4A-211ENST00000498562 H3BUT2 72 aa13.43□□□□□ -0.26
CUL4A-211ENST00000498562 S100A2P29034 98 aa13.43□□□□□ -0.26
CUL4A-211ENST00000498562 LST1O00453 97 aa13.42□□□□□ -0.26
CUL4A-211ENST00000498562 SNHG12Q9BXW3 62 aa13.42□□□□□ -0.26
CUL4A-211ENST00000498562 Q6Q795 121 aa13.4□□□□□ -0.26
CUL4A-211ENST00000498562 SCGB1D1O95968 90 aa13.39□□□□□ -0.27
CUL4A-211ENST00000498562 HIST1H4GQ99525 98 aa13.39□□□□□ -0.27
CUL4A-211ENST00000498562 Q96NJ1 140 aa13.37□□□□□ -0.27
CUL4A-211ENST00000498562 SS18L2Q9UHA2 77 aa13.34□□□□□ -0.27
CUL4A-211ENST00000498562 C20orf166-AS1Q96NR2 134 aa13.32□□□□□ -0.28
CUL4A-211ENST00000498562 COX8AP10176 69 aa13.31□□□□□ -0.28
CUL4A-211ENST00000498562 A8MUU9 505 aa13.28□□□□□ -0.28
CUL4A-211ENST00000498562 CFC1P0CG37 223 aa13.28□□□□□ -0.28
CUL4A-211ENST00000498562 TEN1Q86WV5 123 aa13.28□□□□□ -0.28
CUL4A-211ENST00000498562 FAM218AQ96MZ4 157 aa13.26□□□□□ -0.29
CUL4A-211ENST00000498562 DLEU1O43261 78 aa13.25□□□□□ -0.29
CUL4A-211ENST00000498562 S100A6P06703 90 aa13.25□□□□□ -0.29
CUL4A-211ENST00000498562 NDUFV3P56181 108 aaKnown RBP13.25□□□□□ -0.29
CUL4A-211ENST00000498562 A0A087WSZ3 146 aa13.24□□□□□ -0.29
CUL4A-211ENST00000498562 RAB37Q96AX2 223 aa13.23□□□□□ -0.29
CUL4A-211ENST00000498562 H0YGX0 51 aa13.22□□□□□ -0.29
CUL4A-211ENST00000498562 SNCGO76070 127 aa13.22□□□□□ -0.29
CUL4A-211ENST00000498562 A0A0B4J2C4 111 aa13.21□□□□□ -0.29
CUL4A-211ENST00000498562 KRTAP9-8Q9BYQ0 159 aa13.19□□□□□ -0.3
CUL4A-211ENST00000498562 HIGD1BQ9P298 99 aa13.17□□□□□ -0.3
CUL4A-211ENST00000498562 H3BMG7 143 aa13.16□□□□□ -0.3
CUL4A-211ENST00000498562 DSCR10P59022 87 aa13.16□□□□□ -0.3
CUL4A-211ENST00000498562 C14orf144Q96I85 54 aa13.16□□□□□ -0.3
CUL4A-211ENST00000498562 TRBV20-1A0A075B6N2 111 aa13.15□□□□□ -0.3
CUL4A-211ENST00000498562 A0A1B0GX51 115 aa13.12□□□□□ -0.31
CUL4A-211ENST00000498562 A0A1W2PNM2 257 aa13.11□□□□□ -0.31
CUL4A-211ENST00000498562 C2orf91Q6ZV80 131 aa13.11□□□□□ -0.31
CUL4A-211ENST00000498562 FABP2P12104 132 aa13.1□□□□□ -0.31
CUL4A-211ENST00000498562 USH2AO75445 5202 aa13.1□□□□□ -0.31
CUL4A-211ENST00000498562 SSPOA2VEC9 5147 aa13.09□□□□□ -0.31
CUL4A-211ENST00000498562 GHRHP01286 108 aa13.09□□□□□ -0.31
CUL4A-211ENST00000498562 SIGMAR1Q99720 223 aa13.09□□□□□ -0.31
CUL4A-211ENST00000498562 PAM16Q9Y3D7 125 aa13.09□□□□□ -0.31
CUL4A-211ENST00000498562 SPATA45Q537H7 98 aa13.08□□□□□ -0.32
CUL4A-211ENST00000498562 KRTAP16-1A8MUX0 517 aa13.06□□□□□ -0.32
CUL4A-211ENST00000498562 CEND1Q8N111 149 aa13.06□□□□□ -0.32
CUL4A-211ENST00000498562 PRO1854Q9UHT4 67 aa13.05□□□□□ -0.32
CUL4A-211ENST00000498562 S100A1P23297 94 aa13.04□□□□□ -0.32
CUL4A-211ENST00000498562 TRIAP1O43715 76 aa13.02□□□□□ -0.33
CUL4A-211ENST00000498562 LINC00313P59037 77 aa13.02□□□□□ -0.33
CUL4A-211ENST00000498562 TMEM238LA0A1B0GVL6 79 aa13□□□□□ -0.33
CUL4A-211ENST00000498562 A6NJY4 79 aa13□□□□□ -0.33
CUL4A-211ENST00000498562 IGKV4-1P06312 121 aa13□□□□□ -0.33
CUL4A-211ENST00000498562 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.99□□□□□ -0.33
CUL4A-211ENST00000498562 FXYD2P54710 66 aa12.99□□□□□ -0.33
CUL4A-211ENST00000498562 VAMP8Q9BV40 100 aa12.99□□□□□ -0.33
CUL4A-211ENST00000498562 TRBV7-4A0A0J9YYF1 115 aa12.98□□□□□ -0.33
CUL4A-211ENST00000498562 FAM236DA0A1B0GTK5 79 aa12.96□□□□□ -0.33
CUL4A-211ENST00000498562 MT2AP02795 61 aa12.96□□□□□ -0.33
CUL4A-211ENST00000498562 FAM236CP0DP71 79 aa12.96□□□□□ -0.33
CUL4A-211ENST00000498562 NOTCH2NLQ7Z3S9 236 aa12.96□□□□□ -0.33
CUL4A-211ENST00000498562 ANKRD29Q8N6D5 301 aa12.96□□□□□ -0.33
CUL4A-211ENST00000498562 MPLKIPQ8TAP9 179 aa12.95□□□□□ -0.34
CUL4A-211ENST00000498562 A0A1B0GV72 72 aa12.94□□□□□ -0.34
CUL4A-211ENST00000498562 HRES1P13985 223 aa12.93□□□□□ -0.34
CUL4A-211ENST00000498562 ORMDL1Q9P0S3 153 aa12.93□□□□□ -0.34
CUL4A-211ENST00000498562 KRTAP9-7A8MTY7 169 aa12.92□□□□□ -0.34
CUL4A-211ENST00000498562 DNAL4O96015 105 aa12.91□□□□□ -0.34
CUL4A-211ENST00000498562 LINC00472Q9H8W2 130 aa12.91□□□□□ -0.34
CUL4A-211ENST00000498562 DEFB116Q30KQ4 102 aa12.9□□□□□ -0.34
CUL4A-211ENST00000498562 RBM12B-AS1Q9P1G2 102 aa12.89□□□□□ -0.35
CUL4A-211ENST00000498562 H3BQ85 93 aa12.88□□□□□ -0.35
CUL4A-211ENST00000498562 MT1FP04733 61 aa12.87□□□□□ -0.35
CUL4A-211ENST00000498562 CCKP06307 115 aa12.86□□□□□ -0.35
CUL4A-211ENST00000498562 IGHV6-1A0A0B4J1U7 121 aa12.85□□□□□ -0.35
CUL4A-211ENST00000498562 TMEM256-PLSCR3K7ERE1 68 aa12.85□□□□□ -0.35
CUL4A-211ENST00000498562 TRACP01848 142 aa12.84□□□□□ -0.35
CUL4A-211ENST00000498562 K7ERJ3 54 aa12.82□□□□□ -0.36
CUL4A-211ENST00000498562 PSMB2P49721 201 aa12.82□□□□□ -0.36
CUL4A-211ENST00000498562 LCE2BO14633 110 aa12.81□□□□□ -0.36
CUL4A-211ENST00000498562 HSD52Q0P140 79 aa12.79□□□□□ -0.36
CUL4A-211ENST00000498562 FCGBPQ9Y6R7 5405 aaPredicted RBP12.78□□□□□ -0.36
CUL4A-211ENST00000498562 KRTAP9-3Q9BYQ3 159 aa12.78□□□□□ -0.36
CUL4A-211ENST00000498562 COX6CP09669 75 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms