RNA–Protein interactions for RNA: ENST00000498562.2

CUL4A-211, Transcript of cullin 4A, humanhuman

TSL 3

Gene CUL4A, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-211ENST00000498562 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.36■■□□□ 1.971e-15■■■■■ 136.6
CUL4A-211ENST00000498562 SF3A3Q12874 501 aaKnown RBP eCLIP21.94■■□□□ 1.16e-11■■□□□ 12.1
CUL4A-211ENST00000498562 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.06■■□□□ 1.286e-11■■□□□ 12.5
CUL4A-211ENST00000498562 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP22.42■■□□□ 1.182e-10■■□□□ 11.9
CUL4A-211ENST00000498562 AGGF1Q8N302 714 aaeCLIP24.56■■□□□ 1.526e-10■■■■■ 30.6
CUL4A-211ENST00000498562 SF3B4Q15427 424 aaKnown RBP eCLIP23.61■■□□□ 1.377e-10■■■□□ 19.2
CUL4A-211ENST00000498562 PPIGQ13427 754 aaKnown RBP eCLIP30.44■■■□□ 2.461e-9■□□□□ 9.5
CUL4A-211ENST00000498562 EFTUD2Q15029 972 aaKnown RBP eCLIP24.03■■□□□ 1.443e-9■■■■□ 21.1
CUL4A-211ENST00000498562 XPO5Q9HAV4 1204 aaKnown RBP eCLIP31.81■■■□□ 2.683e-9■□□□□ 8.7
CUL4A-211ENST00000498562 RBM15Q96T37 977 aaKnown RBP eCLIP26.02■■□□□ 1.764e-9■■■■■ 33.8
CUL4A-211ENST00000498562 U2AF1Q01081 240 aaKnown RBP eCLIP34.63■■■■□ 3.135e-9■□□□□ 10.7
CUL4A-211ENST00000498562 GTF2F1P35269 517 aaKnown RBP eCLIP29.32■■■□□ 2.286e-9■■■□□ 18.9
CUL4A-211ENST00000498562 HNRNPMP52272 730 aaKnown RBP eCLIP41.7■■■■■ 4.271e-8■■■■■ 89.9
CUL4A-211ENST00000498562 RBM5P52756 815 aaKnown RBP eCLIP32.58■■■□□ 2.812e-8■■■■■ 30
CUL4A-211ENST00000498562 PRPF4O43172 522 aaKnown RBP eCLIP24.61■■□□□ 1.534e-8■□□□□ 8.3
CUL4A-211ENST00000498562 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.3■□□□□ 0.846e-8■■■■■ 67.2
CUL4A-211ENST00000498562 TIA1P31483 386 aaKnown RBP eCLIP23.48■■□□□ 1.351e-7■■■■□ 22.5
CUL4A-211ENST00000498562 U2AF2P26368 475 aaKnown RBP eCLIP28.53■■■□□ 2.162e-7■■■■■ 27.4
CUL4A-211ENST00000498562 TARDBPQ13148 414 aaKnown RBP eCLIP26.41■■□□□ 1.823e-7■■■■□ 24.7
CUL4A-211ENST00000498562 EIF4G2P78344 907 aaKnown RBP eCLIP35.77■■■■□ 3.323e-7■■■■□ 20.7
CUL4A-211ENST00000498562 GRWD1Q9BQ67 446 aaKnown RBP eCLIP40.33■■■■■ 4.053e-7■■■■□ 20.4
CUL4A-211ENST00000498562 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP40.62■■■■■ 4.093e-7■□□□□ 8.2
CUL4A-211ENST00000498562 YBX3P16989 372 aaKnown RBP eCLIP35.4■■■■□ 3.263e-7■□□□□ 8.4
CUL4A-211ENST00000498562 RBFOX2O43251 390 aaKnown RBP eCLIP19.42■□□□□ 0.74e-7■■■□□ 18.2
CUL4A-211ENST00000498562 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.62■■□□□ 1.694e-7■□□□□ 11.3
CUL4A-211ENST00000498562 DDX59Q5T1V6 619 aaKnown RBP eCLIP23.08■■□□□ 1.294e-7■■□□□ 12
CUL4A-211ENST00000498562 KHSRPQ92945 711 aaKnown RBP eCLIP29.46■■■□□ 2.315e-7■■■■□ 20.3
CUL4A-211ENST00000498562 XRN2Q9H0D6 950 aaKnown RBP eCLIP31.45■■■□□ 2.635e-7■□□□□ 10.8
CUL4A-211ENST00000498562 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.99■■□□□ 1.756e-7■□□□□ 9.3
CUL4A-211ENST00000498562 BCCIPQ9P287 314 aaKnown RBP eCLIP27.31■■□□□ 1.967e-7■■■■■ 36.2
CUL4A-211ENST00000498562 SRSF1Q07955 248 aaKnown RBP eCLIP25.2■■□□□ 1.628e-7■■■■□ 19.5
CUL4A-211ENST00000498562 HNRNPKP61978 463 aaKnown RBP eCLIP26.3■■□□□ 1.88e-7■■■□□ 17.4
CUL4A-211ENST00000498562 SRSF9Q13242 221 aaKnown RBP eCLIP16.03■□□□□ 0.169e-7■□□□□ 9.1
CUL4A-211ENST00000498562 HNRNPLP14866 589 aaKnown RBP eCLIP27.42■■□□□ 1.981e-6■■■□□ 18.8
CUL4A-211ENST00000498562 TBRG4Q969Z0 631 aaKnown RBP eCLIP25.02■■□□□ 1.61e-6■■■□□ 17
CUL4A-211ENST00000498562 AATFQ9NY61 560 aaKnown RBP eCLIP31.76■■■□□ 2.671e-6■□□□□ 9.7
CUL4A-211ENST00000498562 BUD13Q9BRD0 619 aaKnown RBP eCLIP30.45■■■□□ 2.472e-6■□□□□ 9.1
CUL4A-211ENST00000498562 DDX6P26196 483 aaKnown RBP eCLIP27.81■■■□□ 2.042e-6■■■■□ 20
CUL4A-211ENST00000498562 DKC1O60832 514 aaKnown RBP eCLIP28.99■■■□□ 2.232e-6■■■□□ 19.1
CUL4A-211ENST00000498562 NONOQ15233 471 aaKnown RBP eCLIP29.13■■■□□ 2.253e-6■□□□□ 9
CUL4A-211ENST00000498562 SF3B1O75533 1304 aaKnown RBP eCLIP28.57■■■□□ 2.163e-6■■■■■ 137.9
CUL4A-211ENST00000498562 AQRO60306 1485 aaKnown RBP eCLIP47.21■■■■■ 5.154e-6■■■□□ 15.2
CUL4A-211ENST00000498562 ZNF800Q2TB10 664 aaPredicted RBP eCLIP24.34■■□□□ 1.494e-6■□□□□ 9.4
CUL4A-211ENST00000498562 PCBP2Q15366 365 aaKnown RBP eCLIP23.84■■□□□ 1.419e-6■□□□□ 8.1
CUL4A-211ENST00000498562 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.85■■□□□ 1.411e-5■■■■□ 19.8
Retrieved 45 of 45 RNA–protein pairs in 11.1 ms