RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 DNAH5Q8TE73 4624 aa4.77□□□□□ -1.65
CDC42-205ENST00000498236 RYR2Q92736 4967 aa4.76□□□□□ -1.65
CDC42-205ENST00000498236 J3QR89 54 aa4.76□□□□□ -1.65
CDC42-205ENST00000498236 FUSP35637 526 aaKnown RBP eCLIP4.76□□□□□ -1.65
CDC42-205ENST00000498236 UBE2BP63146 152 aa4.76□□□□□ -1.65
CDC42-205ENST00000498236 Q6ZQY7 126 aa4.76□□□□□ -1.65
CDC42-205ENST00000498236 Q6ZSA8 131 aa4.76□□□□□ -1.65
CDC42-205ENST00000498236 DPH3Q96FX2 82 aa4.76□□□□□ -1.65
CDC42-205ENST00000498236 Q9BRP9 147 aa4.76□□□□□ -1.65
CDC42-205ENST00000498236 TEX49A0A1B0GTD5 131 aa4.75□□□□□ -1.65
CDC42-205ENST00000498236 KRTAP11-1Q8IUC1 163 aa4.75□□□□□ -1.65
CDC42-205ENST00000498236 BCE1O60756 84 aa4.74□□□□□ -1.65
CDC42-205ENST00000498236 IGLV5-48A0A075B6I7 105 aa4.73□□□□□ -1.65
CDC42-205ENST00000498236 JMJD7-PLA2G4BH0Y9G9 81 aa4.73□□□□□ -1.65
CDC42-205ENST00000498236 KRTAP13-1Q8IUC0 172 aa4.73□□□□□ -1.65
CDC42-205ENST00000498236 SMCR5Q8TEV8 140 aa4.73□□□□□ -1.65
CDC42-205ENST00000498236 A0A1B0GVY2 172 aa4.72□□□□□ -1.65
CDC42-205ENST00000498236 LINC01547P58512 204 aaPredicted RBP4.72□□□□□ -1.65
CDC42-205ENST00000498236 KRTAP10-1P60331 282 aa4.72□□□□□ -1.65
CDC42-205ENST00000498236 FAM19A1Q7Z5A9 133 aa4.72□□□□□ -1.65
CDC42-205ENST00000498236 KMT2CQ8NEZ4 4911 aaKnown RBP4.71□□□□□ -1.65
CDC42-205ENST00000498236 FAM240AA0A1B0GVK7 77 aa4.71□□□□□ -1.66
CDC42-205ENST00000498236 ERC2-IT1O76042 136 aa4.7□□□□□ -1.66
CDC42-205ENST00000498236 NDUFV3P56181 108 aaKnown RBP4.7□□□□□ -1.66
CDC42-205ENST00000498236 PRLHP81277 87 aa4.7□□□□□ -1.66
CDC42-205ENST00000498236 Q8N377 158 aa4.7□□□□□ -1.66
CDC42-205ENST00000498236 Q8N9P0 234 aaPredicted RBP4.7□□□□□ -1.66
CDC42-205ENST00000498236 CIRBP-AS1Q8TBR5 109 aa4.7□□□□□ -1.66
CDC42-205ENST00000498236 LOC110117498A0A087WWA1 95 aa4.69□□□□□ -1.66
CDC42-205ENST00000498236 ACYP1P07311 99 aa4.69□□□□□ -1.66
CDC42-205ENST00000498236 PDE6GP18545 87 aa4.69□□□□□ -1.66
CDC42-205ENST00000498236 UBE2AP49459 152 aa4.69□□□□□ -1.66
CDC42-205ENST00000498236 RBM3P98179 157 aaKnown RBP4.69□□□□□ -1.66
CDC42-205ENST00000498236 SCXQ7RTU7 201 aa4.69□□□□□ -1.66
CDC42-205ENST00000498236 LAMTOR3Q9UHA4 124 aa4.69□□□□□ -1.66
CDC42-205ENST00000498236 PSORS1C2Q9UIG4 136 aa4.69□□□□□ -1.66
CDC42-205ENST00000498236 SPRR1BP22528 89 aa4.68□□□□□ -1.66
CDC42-205ENST00000498236 ST20-AS1Q8NBB2 130 aa4.68□□□□□ -1.66
CDC42-205ENST00000498236 HIGD2AQ9BW72 106 aa4.68□□□□□ -1.66
CDC42-205ENST00000498236 C14orf132Q9NPU4 83 aa4.68□□□□□ -1.66
CDC42-205ENST00000498236 PKHD1P08F94 4074 aa4.68□□□□□ -1.66
CDC42-205ENST00000498236 TRBV7-4A0A0J9YYF1 115 aa4.67□□□□□ -1.66
CDC42-205ENST00000498236 ZNF861PO60384 105 aa4.67□□□□□ -1.66
CDC42-205ENST00000498236 CCKP06307 115 aa4.67□□□□□ -1.66
CDC42-205ENST00000498236 DSCR8Q96T75 97 aa4.67□□□□□ -1.66
CDC42-205ENST00000498236 C1orf137Q5JT78 98 aa4.66□□□□□ -1.66
CDC42-205ENST00000498236 Q6ZQT0 140 aa4.66□□□□□ -1.66
CDC42-205ENST00000498236 SMIM29Q86T20 159 aa4.66□□□□□ -1.66
CDC42-205ENST00000498236 DEFB105AQ8NG35 78 aa4.66□□□□□ -1.66
CDC42-205ENST00000498236 LRP1BQ9NZR2 4599 aa4.65□□□□□ -1.66
CDC42-205ENST00000498236 IGLV8-61A0A075B6I0 122 aa4.65□□□□□ -1.67
CDC42-205ENST00000498236 IGLV7-43P04211 117 aa4.65□□□□□ -1.67
CDC42-205ENST00000498236 ZNF706Q9Y5V0 76 aaPredicted RBP4.65□□□□□ -1.67
CDC42-205ENST00000498236 DYNC1H1Q14204 4646 aaKnown RBP4.64□□□□□ -1.67
CDC42-205ENST00000498236 SEC61GP60059 68 aa4.64□□□□□ -1.67
CDC42-205ENST00000498236 LINC00483Q53H64 154 aa4.64□□□□□ -1.67
CDC42-205ENST00000498236 VPS25Q9BRG1 176 aa4.64□□□□□ -1.67
CDC42-205ENST00000498236 A0A1B0GW54 56 aa4.63□□□□□ -1.67
CDC42-205ENST00000498236 SPRR4Q96PI1 79 aa4.63□□□□□ -1.67
CDC42-205ENST00000498236 A0A1B0GV72 72 aa4.62□□□□□ -1.67
CDC42-205ENST00000498236 KRTAP29-1A8MX34 341 aaPredicted RBP4.62□□□□□ -1.67
CDC42-205ENST00000498236 F8WEM9 126 aa4.62□□□□□ -1.67
CDC42-205ENST00000498236 C3orf22Q8N5N4 141 aa4.62□□□□□ -1.67
CDC42-205ENST00000498236 IGKV2D-30A0A075B6S6 120 aa4.61□□□□□ -1.67
CDC42-205ENST00000498236 XGP55808 180 aa4.61□□□□□ -1.67
CDC42-205ENST00000498236 Q6JHZ5 121 aa4.61□□□□□ -1.67
CDC42-205ENST00000498236 VPS13BQ7Z7G8 4022 aa4.61□□□□□ -1.67
CDC42-205ENST00000498236 RYR3Q15413 4870 aa4.61□□□□□ -1.67
CDC42-205ENST00000498236 RPL37AP61513 92 aaKnown RBP4.6□□□□□ -1.67
CDC42-205ENST00000498236 HAMPP81172 84 aa4.6□□□□□ -1.67
CDC42-205ENST00000498236 LINC00846Q9NV44 126 aa4.6□□□□□ -1.67
CDC42-205ENST00000498236 SRRM2Q9UQ35 2752 aaKnown RBP4.59□□□□□ -1.67
CDC42-205ENST00000498236 LINC00643Q86TS7 51 aa4.59□□□□□ -1.67
CDC42-205ENST00000498236 Q8NBF4 154 aa4.59□□□□□ -1.67
CDC42-205ENST00000498236 SIGMAR1Q99720 223 aa4.59□□□□□ -1.67
CDC42-205ENST00000498236 APOBP04114 4563 aaKnown RBP4.59□□□□□ -1.68
CDC42-205ENST00000498236 A0A1W2PNM2 257 aa4.58□□□□□ -1.68
CDC42-205ENST00000498236 Q6Q795 121 aa4.58□□□□□ -1.68
CDC42-205ENST00000498236 IGFL1Q6UW32 110 aa4.58□□□□□ -1.68
CDC42-205ENST00000498236 CRYGAP11844 174 aa4.57□□□□□ -1.68
CDC42-205ENST00000498236 UBL5Q9BZL1 73 aa4.57□□□□□ -1.68
CDC42-205ENST00000498236 MT-ATP8P03928 68 aa4.56□□□□□ -1.68
CDC42-205ENST00000498236 FAM229BQ4G0N7 80 aa4.56□□□□□ -1.68
CDC42-205ENST00000498236 ATP5EP2Q5VTU8 51 aa4.56□□□□□ -1.68
CDC42-205ENST00000498236 TRBV7-7A0A0K0K1E9 115 aa4.55□□□□□ -1.68
CDC42-205ENST00000498236 CDK2AP2O75956 126 aa4.55□□□□□ -1.68
CDC42-205ENST00000498236 SPINK6Q6UWN8 80 aa4.55□□□□□ -1.68
CDC42-205ENST00000498236 IMUPQ9GZP8 106 aa4.55□□□□□ -1.68
CDC42-205ENST00000498236 KRTAP10-4P60372 401 aaPredicted RBP4.54□□□□□ -1.68
CDC42-205ENST00000498236 Q6ZVQ6 151 aa4.54□□□□□ -1.68
CDC42-205ENST00000498236 IGLV9-49A0A0B4J1Y8 123 aa4.53□□□□□ -1.68
CDC42-205ENST00000498236 KRTAP1-4P0C5Y4 121 aa4.53□□□□□ -1.68
CDC42-205ENST00000498236 C9orf153Q5TBE3 101 aa4.53□□□□□ -1.68
CDC42-205ENST00000498236 SSBP3-AS1Q7Z2R9 100 aa4.53□□□□□ -1.68
CDC42-205ENST00000498236 SMR3BP02814 79 aaPredicted RBP4.52□□□□□ -1.69
CDC42-205ENST00000498236 SCGB1A1P11684 91 aa4.52□□□□□ -1.69
CDC42-205ENST00000498236 CXCL6P80162 114 aa4.52□□□□□ -1.69
CDC42-205ENST00000498236 MOBPQ13875 183 aa4.52□□□□□ -1.69
CDC42-205ENST00000498236 NREPQ16612 68 aa4.52□□□□□ -1.69
CDC42-205ENST00000498236 ANAPC11Q9NYG5 84 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms