RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 DEFB135Q30KP9 77 aa2.82□□□□□ -1.96
BRCA1-224ENST00000497488 S100ZQ8WXG8 99 aa2.82□□□□□ -1.96
BRCA1-224ENST00000497488 PSENENQ9NZ42 101 aa2.82□□□□□ -1.96
BRCA1-224ENST00000497488 RABAC1Q9UI14 185 aa2.82□□□□□ -1.96
BRCA1-224ENST00000497488 DNAH1Q9P2D7 4330 aa2.81□□□□□ -1.96
BRCA1-224ENST00000497488 ATOX1O00244 68 aa2.81□□□□□ -1.96
BRCA1-224ENST00000497488 TRGV9Q99603 122 aa2.81□□□□□ -1.96
BRCA1-224ENST00000497488 CACFD1Q9UGQ2 172 aa2.81□□□□□ -1.96
BRCA1-224ENST00000497488 SORL1Q92673 2214 aa2.81□□□□□ -1.96
BRCA1-224ENST00000497488 DNAH7Q8WXX0 4024 aa2.81□□□□□ -1.96
BRCA1-224ENST00000497488 TRBV7-3A0A075B6L6 115 aa2.8□□□□□ -1.96
BRCA1-224ENST00000497488 TRBV7-7A0A0K0K1E9 115 aa2.8□□□□□ -1.96
BRCA1-224ENST00000497488 NBDYA0A0U1RRE5 68 aa2.8□□□□□ -1.96
BRCA1-224ENST00000497488 PSMG4Q5JS54 123 aa2.8□□□□□ -1.96
BRCA1-224ENST00000497488 GDF5OSQ5U4N7 250 aa2.8□□□□□ -1.96
BRCA1-224ENST00000497488 C20orf197Q8N268 126 aa2.8□□□□□ -1.96
BRCA1-224ENST00000497488 MGST2Q99735 147 aa2.8□□□□□ -1.96
BRCA1-224ENST00000497488 SNRPGP15A8MWD9 76 aa2.79□□□□□ -1.96
BRCA1-224ENST00000497488 DEFB4AO15263 64 aa2.79□□□□□ -1.96
BRCA1-224ENST00000497488 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.79□□□□□ -1.96
BRCA1-224ENST00000497488 STAB2Q8WWQ8 2551 aa2.78□□□□□ -1.96
BRCA1-224ENST00000497488 NBEAL2Q6ZNJ1 2754 aa2.78□□□□□ -1.96
BRCA1-224ENST00000497488 CSMD3Q7Z407 3707 aa2.78□□□□□ -1.96
BRCA1-224ENST00000497488 BIRC6Q9NR09 4857 aa2.78□□□□□ -1.96
BRCA1-224ENST00000497488 ALMS1Q8TCU4 4167 aa2.78□□□□□ -1.97
BRCA1-224ENST00000497488 IGKV3D-7A0A0C4DH55 119 aa2.77□□□□□ -1.97
BRCA1-224ENST00000497488 IGKV3OR2-268A0A0C4DH90 116 aa2.77□□□□□ -1.97
BRCA1-224ENST00000497488 IGKV2-29A2NJV5 120 aaPredicted RBP2.77□□□□□ -1.97
BRCA1-224ENST00000497488 K7EP34 96 aa2.77□□□□□ -1.97
BRCA1-224ENST00000497488 ZNF56Q15929 161 aa2.77□□□□□ -1.97
BRCA1-224ENST00000497488 PPP1R1CQ8WVI7 109 aa2.77□□□□□ -1.97
BRCA1-224ENST00000497488 FAM167A-AS1Q96KT0 104 aa2.77□□□□□ -1.97
BRCA1-224ENST00000497488 NMES1Q9C002 83 aa2.77□□□□□ -1.97
BRCA1-224ENST00000497488 VPS13DQ5THJ4 4388 aa2.77□□□□□ -1.97
BRCA1-224ENST00000497488 TENM2Q9NT68 2774 aa2.76□□□□□ -1.97
BRCA1-224ENST00000497488 LCE6AA0A183 80 aa2.76□□□□□ -1.97
BRCA1-224ENST00000497488 A8MTW9 85 aa2.76□□□□□ -1.97
BRCA1-224ENST00000497488 CFDP00746 253 aaPredicted RBP2.76□□□□□ -1.97
BRCA1-224ENST00000497488 IGLC2P0DOY2 106 aa2.76□□□□□ -1.97
BRCA1-224ENST00000497488 SPINK13Q1W4C9 94 aa2.76□□□□□ -1.97
BRCA1-224ENST00000497488 Q5BKY6 102 aa2.76□□□□□ -1.97
BRCA1-224ENST00000497488 C10orf113Q5VZT2 155 aa2.76□□□□□ -1.97
BRCA1-224ENST00000497488 SERP2Q8N6R1 65 aa2.76□□□□□ -1.97
BRCA1-224ENST00000497488 MANBALQ9NQG1 85 aa2.76□□□□□ -1.97
BRCA1-224ENST00000497488 M0R3E3 92 aa2.75□□□□□ -1.97
BRCA1-224ENST00000497488 NDUFC1O43677 76 aa2.75□□□□□ -1.97
BRCA1-224ENST00000497488 UNQ6190/PRO20217Q6UXQ8 127 aa2.75□□□□□ -1.97
BRCA1-224ENST00000497488 COX7B2Q8TF08 81 aa2.75□□□□□ -1.97
BRCA1-224ENST00000497488 C20orf78Q9BR46 151 aa2.75□□□□□ -1.97
BRCA1-224ENST00000497488 LYSTQ99698 3801 aa2.75□□□□□ -1.97
BRCA1-224ENST00000497488 IGKV2-40A0A087WW87 121 aaPredicted RBP2.74□□□□□ -1.97
BRCA1-224ENST00000497488 IGKV2D-40P01614 121 aaPredicted RBP2.74□□□□□ -1.97
BRCA1-224ENST00000497488 ELOF1P60002 83 aaKnown RBP2.74□□□□□ -1.97
BRCA1-224ENST00000497488 UBE2D3P61077 147 aa2.74□□□□□ -1.97
BRCA1-224ENST00000497488 UBE2D2P62837 147 aa2.74□□□□□ -1.97
BRCA1-224ENST00000497488 Q5VV11 94 aa2.74□□□□□ -1.97
BRCA1-224ENST00000497488 CYSTM1Q9H1C7 97 aa2.74□□□□□ -1.97
BRCA1-224ENST00000497488 TRAV22A0A0B4J277 110 aa2.73□□□□□ -1.97
BRCA1-224ENST00000497488 LY6G6CO95867 125 aa2.73□□□□□ -1.97
BRCA1-224ENST00000497488 NMBP08949 121 aa2.73□□□□□ -1.97
BRCA1-224ENST00000497488 PEA15Q15121 130 aa2.73□□□□□ -1.97
BRCA1-224ENST00000497488 PCOTHQ58A44 107 aa2.73□□□□□ -1.97
BRCA1-224ENST00000497488 OBSCN-AS1Q96MR7 158 aa2.73□□□□□ -1.97
BRCA1-224ENST00000497488 APLNQ9ULZ1 77 aa2.73□□□□□ -1.97
BRCA1-224ENST00000497488 DNAH10Q8IVF4 4471 aa2.72□□□□□ -1.97
BRCA1-224ENST00000497488 DNAH2Q9P225 4427 aa2.72□□□□□ -1.97
BRCA1-224ENST00000497488 FXYD6-FXYD2A0A087WZ82 144 aa2.72□□□□□ -1.97
BRCA1-224ENST00000497488 CHKB-CPT1BH3BT56 60 aa2.72□□□□□ -1.97
BRCA1-224ENST00000497488 APOC3P02656 99 aa2.72□□□□□ -1.97
BRCA1-224ENST00000497488 HTN1P15515 57 aa2.72□□□□□ -1.97
BRCA1-224ENST00000497488 PRO1854Q9UHT4 67 aa2.72□□□□□ -1.97
BRCA1-224ENST00000497488 LENEPQ9Y5L5 61 aa2.72□□□□□ -1.97
BRCA1-224ENST00000497488 DEFB131BA0A096LNP1 70 aa2.71□□□□□ -1.98
BRCA1-224ENST00000497488 SPART-AS1P0CW21 52 aa2.71□□□□□ -1.98
BRCA1-224ENST00000497488 DEFB130BP0DP73 79 aa2.71□□□□□ -1.98
BRCA1-224ENST00000497488 DEFB130AP0DP74 79 aa2.71□□□□□ -1.98
BRCA1-224ENST00000497488 HTN3P15516 51 aa2.71□□□□□ -1.98
BRCA1-224ENST00000497488 TDRG1Q3Y452 100 aa2.71□□□□□ -1.98
BRCA1-224ENST00000497488 FAM74A4Q5TZK3 123 aa2.71□□□□□ -1.98
BRCA1-224ENST00000497488 KRTAP5-1Q6L8H4 278 aa2.71□□□□□ -1.98
BRCA1-224ENST00000497488 LINC00208Q96KT6 92 aa2.71□□□□□ -1.98
BRCA1-224ENST00000497488 UQCR10Q9UDW1 63 aa2.71□□□□□ -1.98
BRCA1-224ENST00000497488 KIAA1109Q2LD37 5005 aa2.71□□□□□ -1.98
BRCA1-224ENST00000497488 DYNC1H1Q14204 4646 aaKnown RBP2.7□□□□□ -1.98
BRCA1-224ENST00000497488 KMT2AQ03164 3969 aa2.7□□□□□ -1.98
BRCA1-224ENST00000497488 SYS1-DBNDD2H3BUS1 97 aa2.7□□□□□ -1.98
BRCA1-224ENST00000497488 ARL14EPLP0DKL9 152 aa2.7□□□□□ -1.98
BRCA1-224ENST00000497488 TMEM263Q8WUH6 116 aaKnown RBP2.7□□□□□ -1.98
BRCA1-224ENST00000497488 NOP10Q9NPE3 64 aaKnown RBP2.7□□□□□ -1.98
BRCA1-224ENST00000497488 DNAH17Q9UFH2 4485 aa2.7□□□□□ -1.98
BRCA1-224ENST00000497488 FAT2Q9NYQ8 4349 aa2.7□□□□□ -1.98
BRCA1-224ENST00000497488 DNAH6Q9C0G6 4158 aa2.7□□□□□ -1.98
BRCA1-224ENST00000497488 HERC2O95714 4834 aa2.69□□□□□ -1.98
BRCA1-224ENST00000497488 PPP1R17O96001 155 aa2.69□□□□□ -1.98
BRCA1-224ENST00000497488 GCHFRP30047 84 aa2.69□□□□□ -1.98
BRCA1-224ENST00000497488 PP632Q6XCG6 107 aa2.69□□□□□ -1.98
BRCA1-224ENST00000497488 CDC42SE2Q9NRR3 84 aa2.69□□□□□ -1.98
BRCA1-224ENST00000497488 TIMM8BQ9Y5J9 83 aaPredicted RBP2.69□□□□□ -1.98
BRCA1-224ENST00000497488 FRAS1Q86XX4 4008 aa2.69□□□□□ -1.98
BRCA1-224ENST00000497488 A0A087WTM6 91 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms