RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 PLAC8Q9NZF1 115 aa8.28□□□□□ -1.08
VEGFA-215ENST00000497139 IGFL1Q6UW32 110 aa8.26□□□□□ -1.09
VEGFA-215ENST00000497139 SETD2Q9BYW2 2564 aaPredicted RBP8.26□□□□□ -1.09
VEGFA-215ENST00000497139 RPL37AP8A6NKH3 93 aa8.24□□□□□ -1.09
VEGFA-215ENST00000497139 DEFB116Q30KQ4 102 aa8.24□□□□□ -1.09
VEGFA-215ENST00000497139 MOBPQ13875 183 aa8.23□□□□□ -1.09
VEGFA-215ENST00000497139 NF1P21359 2839 aa8.23□□□□□ -1.09
VEGFA-215ENST00000497139 FN1P02751 2386 aaKnown RBP8.22□□□□□ -1.09
VEGFA-215ENST00000497139 A0A087WSZ3 146 aa8.22□□□□□ -1.09
VEGFA-215ENST00000497139 A8MWP4 228 aa8.22□□□□□ -1.09
VEGFA-215ENST00000497139 CNBPP62633 177 aaKnown RBP8.22□□□□□ -1.09
VEGFA-215ENST00000497139 HIVEP2P31629 2446 aa8.21□□□□□ -1.1
VEGFA-215ENST00000497139 OTOGQ6ZRI0 2925 aa8.2□□□□□ -1.1
VEGFA-215ENST00000497139 LINC01556Q5JQF7 62 aa8.19□□□□□ -1.1
VEGFA-215ENST00000497139 SMR3AQ99954 134 aa8.19□□□□□ -1.1
VEGFA-215ENST00000497139 REG3GQ6UW15 175 aa8.19□□□□□ -1.1
VEGFA-215ENST00000497139 NIPBLQ6KC79 2804 aaeCLIP8.19□□□□□ -1.13e-8■■□□□ 13.9
VEGFA-215ENST00000497139 CUBNO60494 3623 aa8.19□□□□□ -1.1
VEGFA-215ENST00000497139 ANK3Q12955 4377 aaKnown RBP8.19□□□□□ -1.1
VEGFA-215ENST00000497139 RPL37AP61513 92 aaKnown RBP8.17□□□□□ -1.1
VEGFA-215ENST00000497139 BAHCC1Q9P281 2608 aa8.17□□□□□ -1.1
VEGFA-215ENST00000497139 TP53AIP1Q9HCN2 124 aa8.16□□□□□ -1.1
VEGFA-215ENST00000497139 FAM168BA1KXE4 195 aa8.16□□□□□ -1.1
VEGFA-215ENST00000497139 HIVEP1P15822 2718 aa8.16□□□□□ -1.1
VEGFA-215ENST00000497139 KRTAP10-3P60369 221 aa8.15□□□□□ -1.1
VEGFA-215ENST00000497139 KRTAP7-1Q8IUC3 87 aa8.15□□□□□ -1.1
VEGFA-215ENST00000497139 LINC00472Q9H8W2 130 aa8.15□□□□□ -1.1
VEGFA-215ENST00000497139 C8orf87E5RJ46 101 aa8.15□□□□□ -1.11
VEGFA-215ENST00000497139 C4orf48Q5BLP8 95 aa8.14□□□□□ -1.11
VEGFA-215ENST00000497139 NBEAL2Q6ZNJ1 2754 aa8.14□□□□□ -1.11
VEGFA-215ENST00000497139 SPAG11AQ6PDA7 123 aa8.13□□□□□ -1.11
VEGFA-215ENST00000497139 F8P00451 2351 aa8.13□□□□□ -1.11
VEGFA-215ENST00000497139 ASB16-AS1Q495Z4 193 aa8.12□□□□□ -1.11
VEGFA-215ENST00000497139 MMP24-AS1A0A0U1RRL7 71 aa8.12□□□□□ -1.11
VEGFA-215ENST00000497139 A0A0G2JQZ4 141 aa8.11□□□□□ -1.11
VEGFA-215ENST00000497139 A0A1W2PNN7 141 aa8.11□□□□□ -1.11
VEGFA-215ENST00000497139 NSD1Q96L73 2696 aaPredicted RBP8.11□□□□□ -1.11
VEGFA-215ENST00000497139 C11orf45Q8TAV5 145 aa8.11□□□□□ -1.11
VEGFA-215ENST00000497139 TEP1Q99973 2627 aaKnown RBP8.11□□□□□ -1.11
VEGFA-215ENST00000497139 Q6ZR54 194 aa8.1□□□□□ -1.11
VEGFA-215ENST00000497139 A0A087X002 238 aa8.1□□□□□ -1.11
VEGFA-215ENST00000497139 SPINK7P58062 85 aa8.1□□□□□ -1.11
VEGFA-215ENST00000497139 SPRR1BP22528 89 aa8.09□□□□□ -1.11
VEGFA-215ENST00000497139 DNAH10OSP0CZ25 163 aa8.08□□□□□ -1.12
VEGFA-215ENST00000497139 DEFB131BA0A096LNP1 70 aa8.07□□□□□ -1.12
VEGFA-215ENST00000497139 PCOTHQ58A44 107 aa8.06□□□□□ -1.12
VEGFA-215ENST00000497139 HRES1P13985 223 aa8.06□□□□□ -1.12
VEGFA-215ENST00000497139 LINC00313P59037 77 aa8.05□□□□□ -1.12
VEGFA-215ENST00000497139 H0Y9J4 135 aa8.05□□□□□ -1.12
VEGFA-215ENST00000497139 IGKV2-24A0A0C4DH68 120 aa8.04□□□□□ -1.12
VEGFA-215ENST00000497139 INAFM1C9JVW0 142 aa8.04□□□□□ -1.12
VEGFA-215ENST00000497139 PLA2G1BP04054 148 aaKnown RBP8.04□□□□□ -1.12
VEGFA-215ENST00000497139 PRLHP81277 87 aa8.01□□□□□ -1.13
VEGFA-215ENST00000497139 LINC01554Q52M75 96 aa7.99□□□□□ -1.13
VEGFA-215ENST00000497139 ATRQ13535 2644 aa7.97□□□□□ -1.13
VEGFA-215ENST00000497139 C8orf17Q9NRJ1 99 aa7.97□□□□□ -1.13
VEGFA-215ENST00000497139 MAST4O15021 2626 aa7.97□□□□□ -1.13
VEGFA-215ENST00000497139 TENM1Q9UKZ4 2725 aa7.94□□□□□ -1.14
VEGFA-215ENST00000497139 CASC10Q5T4H9 136 aa7.94□□□□□ -1.14
VEGFA-215ENST00000497139 Q96NJ1 140 aa7.94□□□□□ -1.14
VEGFA-215ENST00000497139 PRAC1Q96KF2 57 aa7.92□□□□□ -1.14
VEGFA-215ENST00000497139 RTL8CO15255 209 aa7.91□□□□□ -1.14
VEGFA-215ENST00000497139 ACYP2P14621 99 aa7.9□□□□□ -1.14
VEGFA-215ENST00000497139 MRPL34Q9BQ48 92 aaKnown RBP7.9□□□□□ -1.14
VEGFA-215ENST00000497139 A0A096LNI7 61 aa7.9□□□□□ -1.15
VEGFA-215ENST00000497139 A0A1B0GVX0 72 aa7.9□□□□□ -1.15
VEGFA-215ENST00000497139 SPATA8Q6RVD6 105 aa7.9□□□□□ -1.15
VEGFA-215ENST00000497139 VWFP04275 2813 aa7.9□□□□□ -1.15
VEGFA-215ENST00000497139 PRR26Q8N8Z3 221 aa7.87□□□□□ -1.15
VEGFA-215ENST00000497139 MDFIQ99750 246 aa7.87□□□□□ -1.15
VEGFA-215ENST00000497139 H3BS24 57 aa7.87□□□□□ -1.15
VEGFA-215ENST00000497139 STAB1Q9NY15 2570 aa7.85□□□□□ -1.15
VEGFA-215ENST00000497139 CDK2AP2O75956 126 aa7.85□□□□□ -1.15
VEGFA-215ENST00000497139 ADM2Q7Z4H4 148 aa7.84□□□□□ -1.15
VEGFA-215ENST00000497139 IGHV6-1A0A0B4J1U7 121 aa7.83□□□□□ -1.16
VEGFA-215ENST00000497139 A0A1B0GU69 56 aa7.82□□□□□ -1.16
VEGFA-215ENST00000497139 TENM2Q9NT68 2774 aa7.82□□□□□ -1.16
VEGFA-215ENST00000497139 DMAC1Q96GE9 116 aa7.81□□□□□ -1.16
VEGFA-215ENST00000497139 COL6A5A8TX70 2615 aa7.81□□□□□ -1.16
VEGFA-215ENST00000497139 RETNLBQ9BQ08 111 aa7.8□□□□□ -1.16
VEGFA-215ENST00000497139 TRRAPQ9Y4A5 3859 aa7.8□□□□□ -1.16
VEGFA-215ENST00000497139 ALMS1Q8TCU4 4167 aa7.8□□□□□ -1.16
VEGFA-215ENST00000497139 FBN1P35555 2871 aaKnown RBP7.8□□□□□ -1.16
VEGFA-215ENST00000497139 KRTAP13-3Q3SY46 172 aa7.8□□□□□ -1.16
VEGFA-215ENST00000497139 DNAH1Q9P2D7 4330 aa7.79□□□□□ -1.16
VEGFA-215ENST00000497139 KRTAP13-1Q8IUC0 172 aa7.79□□□□□ -1.16
VEGFA-215ENST00000497139 UQCR11O14957 56 aa7.79□□□□□ -1.16
VEGFA-215ENST00000497139 KRTAP11-1Q8IUC1 163 aa7.79□□□□□ -1.16
VEGFA-215ENST00000497139 KRTAP10-11P60412 298 aa7.78□□□□□ -1.16
VEGFA-215ENST00000497139 MIR22HGQ0VDD5 57 aa7.78□□□□□ -1.16
VEGFA-215ENST00000497139 C14orf177Q52M58 125 aa7.76□□□□□ -1.17
VEGFA-215ENST00000497139 LINC00483Q53H64 154 aa7.76□□□□□ -1.17
VEGFA-215ENST00000497139 KRTAP24-1Q3LI83 254 aa7.76□□□□□ -1.17
VEGFA-215ENST00000497139 IGLV9-49A0A0B4J1Y8 123 aa7.72□□□□□ -1.17
VEGFA-215ENST00000497139 CHTF8P0CG12 524 aa7.72□□□□□ -1.17
VEGFA-215ENST00000497139 Q5W150 140 aa7.72□□□□□ -1.17
VEGFA-215ENST00000497139 ZNF706Q9Y5V0 76 aaPredicted RBP7.72□□□□□ -1.17
VEGFA-215ENST00000497139 PKD1L1Q8TDX9 2849 aa7.71□□□□□ -1.17
VEGFA-215ENST00000497139 K7EIL1 84 aa7.7□□□□□ -1.18
VEGFA-215ENST00000497139 CSAG1Q6PB30 78 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms