RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 ZDBF2Q9HCK1 2354 aa1.61□□□□□ -2.15
SNRNP48-202ENST00000496946 DEFB108BQ8NET1 73 aa1.61□□□□□ -2.15
SNRNP48-202ENST00000496946 CHD6Q8TD26 2715 aa1.61□□□□□ -2.15
SNRNP48-202ENST00000496946 DEFB130BP0DP73 79 aa1.6□□□□□ -2.15
SNRNP48-202ENST00000496946 DEFB130AP0DP74 79 aa1.6□□□□□ -2.15
SNRNP48-202ENST00000496946 SPINK13Q1W4C9 94 aa1.6□□□□□ -2.15
SNRNP48-202ENST00000496946 SPTBN1Q01082 2364 aaKnown RBP1.6□□□□□ -2.15
SNRNP48-202ENST00000496946 SETXQ7Z333 2677 aaKnown RBP1.6□□□□□ -2.15
SNRNP48-202ENST00000496946 CHD8Q9HCK8 2581 aa1.6□□□□□ -2.15
SNRNP48-202ENST00000496946 C10orf99Q6UWK7 81 aa1.6□□□□□ -2.15
SNRNP48-202ENST00000496946 UBE2DNLQ8IWF7 75 aa1.6□□□□□ -2.15
SNRNP48-202ENST00000496946 WNK1Q9H4A3 2382 aa1.6□□□□□ -2.15
SNRNP48-202ENST00000496946 RPL37P61927 97 aaKnown RBP1.59□□□□□ -2.15
SNRNP48-202ENST00000496946 LELP1Q5T871 98 aa1.59□□□□□ -2.15
SNRNP48-202ENST00000496946 USMG5Q96IX5 58 aa1.59□□□□□ -2.15
SNRNP48-202ENST00000496946 KRTAP13-3Q3SY46 172 aa1.59□□□□□ -2.16
SNRNP48-202ENST00000496946 UNQ6190/PRO20217Q6UXQ8 127 aa1.59□□□□□ -2.16
SNRNP48-202ENST00000496946 GCN1Q92616 2671 aaKnown RBP1.58□□□□□ -2.16
SNRNP48-202ENST00000496946 KRTAP10-8P60410 259 aa1.58□□□□□ -2.16
SNRNP48-202ENST00000496946 DEFB109BQ30KR1 87 aa1.58□□□□□ -2.16
SNRNP48-202ENST00000496946 RHPN1-AS1Q9BWJ2 59 aa1.58□□□□□ -2.16
SNRNP48-202ENST00000496946 CEP350Q5VT06 3117 aa1.58□□□□□ -2.16
SNRNP48-202ENST00000496946 HTN1P15515 57 aa1.58□□□□□ -2.16
SNRNP48-202ENST00000496946 ZNF292O60281 2723 aa1.58□□□□□ -2.16
SNRNP48-202ENST00000496946 PTPRZ1P23471 2315 aaPredicted RBP1.57□□□□□ -2.16
SNRNP48-202ENST00000496946 CD52P31358 61 aa1.57□□□□□ -2.16
SNRNP48-202ENST00000496946 SPRR1AP35321 89 aa1.56□□□□□ -2.16
SNRNP48-202ENST00000496946 PCNX1Q96RV3 2341 aa1.56□□□□□ -2.16
SNRNP48-202ENST00000496946 RYR2Q92736 4967 aa1.56□□□□□ -2.16
SNRNP48-202ENST00000496946 KRTAP1-4P0C5Y4 121 aa1.56□□□□□ -2.16
SNRNP48-202ENST00000496946 LYNX1P0DP58 116 aa1.56□□□□□ -2.16
SNRNP48-202ENST00000496946 TTC28Q96AY4 2481 aa1.56□□□□□ -2.16
SNRNP48-202ENST00000496946 FBN2P35556 2912 aa1.56□□□□□ -2.16
SNRNP48-202ENST00000496946 PRLHP81277 87 aa1.55□□□□□ -2.16
SNRNP48-202ENST00000496946 MGAQ8IWI9 3026 aa1.55□□□□□ -2.16
SNRNP48-202ENST00000496946 MYO18BQ8IUG5 2567 aa1.55□□□□□ -2.16
SNRNP48-202ENST00000496946 H3BUA1 57 aa1.55□□□□□ -2.16
SNRNP48-202ENST00000496946 PP632Q6XCG6 107 aa1.55□□□□□ -2.16
SNRNP48-202ENST00000496946 HERC2O95714 4834 aa1.55□□□□□ -2.16
SNRNP48-202ENST00000496946 K7EIL1 84 aa1.54□□□□□ -2.16
SNRNP48-202ENST00000496946 SETD2Q9BYW2 2564 aaPredicted RBP1.54□□□□□ -2.16
SNRNP48-202ENST00000496946 LCE3AQ5TA76 89 aa1.54□□□□□ -2.16
SNRNP48-202ENST00000496946 OTOGLQ3ZCN5 2332 aa1.54□□□□□ -2.16
SNRNP48-202ENST00000496946 PKDREJQ9NTG1 2253 aa1.54□□□□□ -2.16
SNRNP48-202ENST00000496946 KIAA1109Q2LD37 5005 aa1.54□□□□□ -2.16
SNRNP48-202ENST00000496946 SPINK1P00995 79 aa1.53□□□□□ -2.16
SNRNP48-202ENST00000496946 SPTA1P02549 2419 aa1.53□□□□□ -2.16
SNRNP48-202ENST00000496946 ACACAQ13085 2346 aa1.53□□□□□ -2.17
SNRNP48-202ENST00000496946 C2CD3Q4AC94 2353 aa1.52□□□□□ -2.17
SNRNP48-202ENST00000496946 SPRR1BP22528 89 aa1.52□□□□□ -2.17
SNRNP48-202ENST00000496946 PIEZO2Q9H5I5 2752 aa1.52□□□□□ -2.17
SNRNP48-202ENST00000496946 JMJD1CQ15652 2540 aa1.52□□□□□ -2.17
SNRNP48-202ENST00000496946 AKAP6Q13023 2319 aa1.52□□□□□ -2.17
SNRNP48-202ENST00000496946 USP9XQ93008 2570 aaPredicted RBP1.52□□□□□ -2.17
SNRNP48-202ENST00000496946 DNAH3Q8TD57 4116 aa1.51□□□□□ -2.17
SNRNP48-202ENST00000496946 DOPEY1Q5JWR5 2465 aa1.51□□□□□ -2.17
SNRNP48-202ENST00000496946 EP400Q96L91 3159 aa1.51□□□□□ -2.17
SNRNP48-202ENST00000496946 CRCT1Q9UGL9 99 aa1.51□□□□□ -2.17
SNRNP48-202ENST00000496946 APLNQ9ULZ1 77 aa1.51□□□□□ -2.17
SNRNP48-202ENST00000496946 Q9Y3F1 56 aa1.51□□□□□ -2.17
SNRNP48-202ENST00000496946 COL6A3P12111 3177 aa1.5□□□□□ -2.17
SNRNP48-202ENST00000496946 AHNAK2Q8IVF2 5795 aa1.5□□□□□ -2.17
SNRNP48-202ENST00000496946 CHD7Q9P2D1 2997 aa1.5□□□□□ -2.17
SNRNP48-202ENST00000496946 GVINP1Q7Z2Y8 2422 aa1.5□□□□□ -2.17
SNRNP48-202ENST00000496946 NBPF19A0A087WUL8 3843 aa1.5□□□□□ -2.17
SNRNP48-202ENST00000496946 KRTAP13-2Q52LG2 175 aa1.5□□□□□ -2.17
SNRNP48-202ENST00000496946 BRD3OSQ6XYD6 125 aa1.5□□□□□ -2.17
SNRNP48-202ENST00000496946 MAP1BP46821 2468 aaKnown RBP1.49□□□□□ -2.17
SNRNP48-202ENST00000496946 H3BUX3 64 aa1.49□□□□□ -2.17
SNRNP48-202ENST00000496946 DEFB119Q8N690 84 aa1.49□□□□□ -2.17
SNRNP48-202ENST00000496946 WDR87Q6ZQQ6 2873 aa1.49□□□□□ -2.17
SNRNP48-202ENST00000496946 NAV2Q8IVL1 2488 aa1.49□□□□□ -2.17
SNRNP48-202ENST00000496946 LCE3DQ9BYE3 92 aa1.49□□□□□ -2.17
SNRNP48-202ENST00000496946 NOP10Q9NPE3 64 aaKnown RBP1.49□□□□□ -2.17
SNRNP48-202ENST00000496946 S4R3F8 94 aa1.49□□□□□ -2.17
SNRNP48-202ENST00000496946 SPTBN2O15020 2390 aa1.48□□□□□ -2.17
SNRNP48-202ENST00000496946 TEP1Q99973 2627 aaKnown RBP1.48□□□□□ -2.17
SNRNP48-202ENST00000496946 BDP1A6H8Y1 2624 aa1.48□□□□□ -2.17
SNRNP48-202ENST00000496946 CSPG4Q6UVK1 2322 aa1.48□□□□□ -2.17
SNRNP48-202ENST00000496946 DEFB136Q30KP8 78 aa1.48□□□□□ -2.17
SNRNP48-202ENST00000496946 RYR1P21817 5038 aa1.47□□□□□ -2.17
SNRNP48-202ENST00000496946 CEP250Q9BV73 2442 aa1.47□□□□□ -2.17
SNRNP48-202ENST00000496946 MYO9AB2RTY4 2548 aa1.47□□□□□ -2.17
SNRNP48-202ENST00000496946 REV3LO60673 3130 aa1.47□□□□□ -2.17
SNRNP48-202ENST00000496946 FBN1P35555 2871 aaKnown RBP1.47□□□□□ -2.17
SNRNP48-202ENST00000496946 ROS1P08922 2347 aa1.47□□□□□ -2.17
SNRNP48-202ENST00000496946 HIVEP2P31629 2446 aa1.47□□□□□ -2.17
SNRNP48-202ENST00000496946 FASNP49327 2511 aaKnown RBP1.46□□□□□ -2.18
SNRNP48-202ENST00000496946 ACACBO00763 2458 aa1.46□□□□□ -2.18
SNRNP48-202ENST00000496946 BSNQ9UPA5 3926 aa1.45□□□□□ -2.18
SNRNP48-202ENST00000496946 HERC1Q15751 4861 aa1.45□□□□□ -2.18
SNRNP48-202ENST00000496946 A0A0D9SG42 100 aa1.45□□□□□ -2.18
SNRNP48-202ENST00000496946 SPRR5A0A1B0GTR4 108 aa1.45□□□□□ -2.18
SNRNP48-202ENST00000496946 DSPP15924 2871 aaKnown RBP1.45□□□□□ -2.18
SNRNP48-202ENST00000496946 PRO0255Q9UI72 69 aa1.45□□□□□ -2.18
SNRNP48-202ENST00000496946 APC2O95996 2303 aa1.45□□□□□ -2.18
SNRNP48-202ENST00000496946 SRCAPQ6ZRS2 3230 aa1.44□□□□□ -2.18
SNRNP48-202ENST00000496946 COL6A5A8TX70 2615 aa1.44□□□□□ -2.18
SNRNP48-202ENST00000496946 SPTBN4Q9H254 2564 aa1.44□□□□□ -2.18
SNRNP48-202ENST00000496946 CACNA1HO95180 2353 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 211.9 ms