RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 KNL1Q8NG31 2342 aa-0.15□□□□□ -2.43
TARDBP-210ENST00000496840 CNOT1A5YKK6 2376 aaKnown RBP-0.16□□□□□ -2.43
TARDBP-210ENST00000496840 PLCH1Q4KWH8 1693 aa-0.16□□□□□ -2.44
TARDBP-210ENST00000496840 CFAP43Q8NDM7 1665 aa-0.16□□□□□ -2.44
TARDBP-210ENST00000496840 SPRR2AP35326 72 aa-0.16□□□□□ -2.44
TARDBP-210ENST00000496840 KCNQ1DNQ9H478 68 aa-0.16□□□□□ -2.44
TARDBP-210ENST00000496840 ABCA8O94911 1581 aa-0.16□□□□□ -2.44
TARDBP-210ENST00000496840 STAB1Q9NY15 2570 aa-0.16□□□□□ -2.44
TARDBP-210ENST00000496840 DEPDC5O75140 1603 aa-0.16□□□□□ -2.44
TARDBP-210ENST00000496840 HILPDAQ9Y5L2 63 aa-0.17□□□□□ -2.44
TARDBP-210ENST00000496840 SCN11AQ9UI33 1791 aa-0.18□□□□□ -2.44
TARDBP-210ENST00000496840 PDCD5O14737 125 aa-0.18□□□□□ -2.44
TARDBP-210ENST00000496840 CRIP1P50238 77 aa-0.18□□□□□ -2.44
TARDBP-210ENST00000496840 ATXN8Q156A1 80 aa-0.18□□□□□ -2.44
TARDBP-210ENST00000496840 DDX60LQ5H9U9 1706 aaKnown RBP-0.18□□□□□ -2.44
TARDBP-210ENST00000496840 ZANQ9Y493 2812 aa-0.19□□□□□ -2.44
TARDBP-210ENST00000496840 ETDCA0A1B0GVM5 59 aa-0.19□□□□□ -2.44
TARDBP-210ENST00000496840 H3BNG1 76 aa-0.19□□□□□ -2.44
TARDBP-210ENST00000496840 GNG13Q9P2W3 67 aa-0.19□□□□□ -2.44
TARDBP-210ENST00000496840 TRANK1O15050 2925 aa-0.19□□□□□ -2.44
TARDBP-210ENST00000496840 TENM2Q9NT68 2774 aa-0.19□□□□□ -2.44
TARDBP-210ENST00000496840 AKAP13Q12802 2813 aa-0.19□□□□□ -2.44
TARDBP-210ENST00000496840 KRTAP19-7Q3SYF9 63 aa-0.2□□□□□ -2.44
TARDBP-210ENST00000496840 DUOX2Q9NRD8 1548 aa-0.2□□□□□ -2.44
TARDBP-210ENST00000496840 UGGT2Q9NYU1 1516 aa-0.2□□□□□ -2.44
TARDBP-210ENST00000496840 DIP2AQ14689 1571 aa-0.2□□□□□ -2.44
TARDBP-210ENST00000496840 PDE4DIPQ5VU43 2346 aa-0.2□□□□□ -2.44
TARDBP-210ENST00000496840 C9orf92A6NGG3 77 aa-0.21□□□□□ -2.44
TARDBP-210ENST00000496840 SPRR2EP22531 72 aa-0.21□□□□□ -2.44
TARDBP-210ENST00000496840 PRLHP81277 87 aa-0.21□□□□□ -2.44
TARDBP-210ENST00000496840 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.21□□□□□ -2.44
TARDBP-210ENST00000496840 PKHD1P08F94 4074 aa-0.22□□□□□ -2.44
TARDBP-210ENST00000496840 DEFB106AQ8N104 65 aa-0.22□□□□□ -2.44
TARDBP-210ENST00000496840 MUC2Q02817 5179 aa-0.22□□□□□ -2.44
TARDBP-210ENST00000496840 CDC42BPGQ6DT37 1551 aa-0.23□□□□□ -2.45
TARDBP-210ENST00000496840 THOC2Q8NI27 1593 aaKnown RBP-0.23□□□□□ -2.45
TARDBP-210ENST00000496840 MYO5CQ9NQX4 1742 aa-0.23□□□□□ -2.45
TARDBP-210ENST00000496840 SVEP1Q4LDE5 3571 aa-0.24□□□□□ -2.45
TARDBP-210ENST00000496840 IQGAP3Q86VI3 1631 aa-0.24□□□□□ -2.45
TARDBP-210ENST00000496840 SRRM2Q9UQ35 2752 aaKnown RBP-0.24□□□□□ -2.45
TARDBP-210ENST00000496840 S4R3F8 94 aa-0.24□□□□□ -2.45
TARDBP-210ENST00000496840 ITSN1Q15811 1721 aa-0.24□□□□□ -2.45
TARDBP-210ENST00000496840 TNRC18O15417 2968 aaPredicted RBP-0.24□□□□□ -2.45
TARDBP-210ENST00000496840 HECTD1Q9ULT8 2610 aa-0.25□□□□□ -2.45
TARDBP-210ENST00000496840 DEFB114Q30KQ6 69 aa-0.25□□□□□ -2.45
TARDBP-210ENST00000496840 MINOS1Q5TGZ0 78 aa-0.25□□□□□ -2.45
TARDBP-210ENST00000496840 KIAA0586Q9BVV6 1533 aa-0.25□□□□□ -2.45
TARDBP-210ENST00000496840 SETD2Q9BYW2 2564 aaPredicted RBP-0.25□□□□□ -2.45
TARDBP-210ENST00000496840 SPTBN4Q9H254 2564 aa-0.26□□□□□ -2.45
TARDBP-210ENST00000496840 TJP1Q07157 1748 aa-0.26□□□□□ -2.45
TARDBP-210ENST00000496840 RNF17Q9BXT8 1623 aaKnown RBP-0.26□□□□□ -2.45
TARDBP-210ENST00000496840 ASXL1Q8IXJ9 1541 aa-0.26□□□□□ -2.45
TARDBP-210ENST00000496840 FLGP20930 4061 aaPredicted RBP-0.26□□□□□ -2.45
TARDBP-210ENST00000496840 PKD1P98161 4303 aa-0.27□□□□□ -2.45
TARDBP-210ENST00000496840 LRRIQ1Q96JM4 1722 aa-0.27□□□□□ -2.45
TARDBP-210ENST00000496840 PRRC2CQ9Y520 2896 aaKnown RBP-0.27□□□□□ -2.45
TARDBP-210ENST00000496840 PDZD2O15018 2839 aa-0.27□□□□□ -2.45
TARDBP-210ENST00000496840 MAP1AP78559 2803 aaPredicted RBP-0.27□□□□□ -2.45
TARDBP-210ENST00000496840 LYSTQ99698 3801 aa-0.27□□□□□ -2.45
TARDBP-210ENST00000496840 SONP18583 2426 aaKnown RBP-0.27□□□□□ -2.45
TARDBP-210ENST00000496840 ZC3H13Q5T200 1668 aaKnown RBP-0.27□□□□□ -2.45
TARDBP-210ENST00000496840 CREBBPQ92793 2442 aa-0.28□□□□□ -2.45
TARDBP-210ENST00000496840 NBASA2RRP1 2371 aa-0.28□□□□□ -2.45
TARDBP-210ENST00000496840 LINC01549A6NIU2 74 aa-0.28□□□□□ -2.45
TARDBP-210ENST00000496840 RPS27P42677 84 aaKnown RBP-0.28□□□□□ -2.45
TARDBP-210ENST00000496840 WT1-ASQ06250 92 aa-0.28□□□□□ -2.45
TARDBP-210ENST00000496840 RPS27LQ71UM5 84 aaKnown RBP-0.28□□□□□ -2.45
TARDBP-210ENST00000496840 NRAPQ86VF7 1730 aa-0.28□□□□□ -2.45
TARDBP-210ENST00000496840 ABCA9Q8IUA7 1624 aa-0.28□□□□□ -2.45
TARDBP-210ENST00000496840 INO80Q9ULG1 1556 aaPredicted RBP-0.28□□□□□ -2.45
TARDBP-210ENST00000496840 ABCC6O95255 1503 aa-0.28□□□□□ -2.45
TARDBP-210ENST00000496840 NBEAL1Q6ZS30 2694 aa-0.29□□□□□ -2.46
TARDBP-210ENST00000496840 DSPP15924 2871 aaKnown RBP-0.29□□□□□ -2.46
TARDBP-210ENST00000496840 MT1AP04731 61 aa-0.29□□□□□ -2.46
TARDBP-210ENST00000496840 PARP4Q9UKK3 1724 aaKnown RBP-0.3□□□□□ -2.46
TARDBP-210ENST00000496840 DNMBPQ6XZF7 1577 aa-0.3□□□□□ -2.46
TARDBP-210ENST00000496840 FCER1GP30273 86 aa-0.3□□□□□ -2.46
TARDBP-210ENST00000496840 KRTAP19-8Q3LI54 63 aa-0.3□□□□□ -2.46
TARDBP-210ENST00000496840 SPRR2FQ96RM1 72 aa-0.3□□□□□ -2.46
TARDBP-210ENST00000496840 C6orf48Q9UBA6 75 aa-0.3□□□□□ -2.46
TARDBP-210ENST00000496840 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.3□□□□□ -2.46
TARDBP-210ENST00000496840 PCLOQ9Y6V0 5065 aa-0.31□□□□□ -2.46
TARDBP-210ENST00000496840 NHSQ6T4R5 1651 aa-0.32□□□□□ -2.46
TARDBP-210ENST00000496840 NCBP2-AS2Q69YL0 99 aa-0.32□□□□□ -2.46
TARDBP-210ENST00000496840 NF1P21359 2839 aa-0.32□□□□□ -2.46
TARDBP-210ENST00000496840 STAB2Q8WWQ8 2551 aa-0.33□□□□□ -2.46
TARDBP-210ENST00000496840 ITSN2Q9NZM3 1697 aa-0.33□□□□□ -2.46
TARDBP-210ENST00000496840 SFTA3P0C7M3 94 aa-0.33□□□□□ -2.46
TARDBP-210ENST00000496840 DEFB110Q30KQ9 67 aa-0.33□□□□□ -2.46
TARDBP-210ENST00000496840 LAMA5O15230 3695 aa-0.33□□□□□ -2.46
TARDBP-210ENST00000496840 DNAH9Q9NYC9 4486 aa-0.34□□□□□ -2.46
TARDBP-210ENST00000496840 CUBNO60494 3623 aa-0.35□□□□□ -2.47
TARDBP-210ENST00000496840 TGP01266 2768 aa-0.35□□□□□ -2.47
TARDBP-210ENST00000496840 KIF1AQ12756 1690 aa-0.35□□□□□ -2.47
TARDBP-210ENST00000496840 EFCAB5A4FU69 1503 aa-0.35□□□□□ -2.47
TARDBP-210ENST00000496840 MADDQ8WXG6 1647 aa-0.35□□□□□ -2.47
TARDBP-210ENST00000496840 FAT3Q8TDW7 4589 aa-0.35□□□□□ -2.47
TARDBP-210ENST00000496840 DMXL1Q9Y485 3027 aa-0.35□□□□□ -2.47
TARDBP-210ENST00000496840 SPG11Q96JI7 2443 aa-0.36□□□□□ -2.47
TARDBP-210ENST00000496840 C3P01024 1663 aa-0.36□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms