RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 CSMD1Q96PZ7 3565 aa0.97□□□□□ -2.25
CLK1-214ENST00000496205 CELSR2Q9HCU4 2923 aa0.96□□□□□ -2.26
CLK1-214ENST00000496205 ANKRD11Q6UB99 2663 aaPredicted RBP0.96□□□□□ -2.26
CLK1-214ENST00000496205 CADP27708 2225 aa0.96□□□□□ -2.26
CLK1-214ENST00000496205 CEP250Q9BV73 2442 aa0.96□□□□□ -2.26
CLK1-214ENST00000496205 PIGYQ3MUY2 71 aa0.96□□□□□ -2.26
CLK1-214ENST00000496205 TP53AIP1Q9HCN2 124 aa0.96□□□□□ -2.26
CLK1-214ENST00000496205 Q9Y3F1 56 aa0.96□□□□□ -2.26
CLK1-214ENST00000496205 TIMM8BQ9Y5J9 83 aaPredicted RBP0.96□□□□□ -2.26
CLK1-214ENST00000496205 CFAP46Q8IYW2 2715 aa0.96□□□□□ -2.26
CLK1-214ENST00000496205 ANK2Q01484 3957 aa0.96□□□□□ -2.26
CLK1-214ENST00000496205 ASXL3Q9C0F0 2248 aa0.96□□□□□ -2.26
CLK1-214ENST00000496205 GVINP1Q7Z2Y8 2422 aa0.96□□□□□ -2.26
CLK1-214ENST00000496205 CRYBG3Q68DQ2 2970 aa0.96□□□□□ -2.26
CLK1-214ENST00000496205 DCHS2Q6V1P9 2916 aa0.95□□□□□ -2.26
CLK1-214ENST00000496205 NCOR2Q9Y618 2525 aa0.95□□□□□ -2.26
CLK1-214ENST00000496205 COL12A1Q99715 3063 aa0.95□□□□□ -2.26
CLK1-214ENST00000496205 MAP1BP46821 2468 aaKnown RBP0.95□□□□□ -2.26
CLK1-214ENST00000496205 SVEP1Q4LDE5 3571 aa0.95□□□□□ -2.26
CLK1-214ENST00000496205 TACC2O95359 2948 aa0.95□□□□□ -2.26
CLK1-214ENST00000496205 M0R1W7 72 aa0.95□□□□□ -2.26
CLK1-214ENST00000496205 NDUFA4O00483 81 aa0.95□□□□□ -2.26
CLK1-214ENST00000496205 CMC2Q9NRP2 79 aa0.95□□□□□ -2.26
CLK1-214ENST00000496205 ACACAQ13085 2346 aa0.95□□□□□ -2.26
CLK1-214ENST00000496205 PIEZO2Q9H5I5 2752 aa0.95□□□□□ -2.26
CLK1-214ENST00000496205 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
CLK1-214ENST00000496205 ITPR1Q14643 2758 aa0.94□□□□□ -2.26
CLK1-214ENST00000496205 AHCTF1Q8WYP5 2266 aa0.94□□□□□ -2.26
CLK1-214ENST00000496205 EP300Q09472 2414 aaPredicted RBP0.94□□□□□ -2.26
CLK1-214ENST00000496205 COX7BP24311 80 aa0.94□□□□□ -2.26
CLK1-214ENST00000496205 DEFB123Q8N688 67 aa0.94□□□□□ -2.26
CLK1-214ENST00000496205 UBL5Q9BZL1 73 aa0.94□□□□□ -2.26
CLK1-214ENST00000496205 NMES1Q9C002 83 aa0.94□□□□□ -2.26
CLK1-214ENST00000496205 PRO3102Q9H379 93 aa0.94□□□□□ -2.26
CLK1-214ENST00000496205 CRIPTQ9P021 101 aa0.94□□□□□ -2.26
CLK1-214ENST00000496205 CSMD2Q7Z408 3487 aa0.94□□□□□ -2.26
CLK1-214ENST00000496205 TLN1Q9Y490 2541 aaKnown RBP0.94□□□□□ -2.26
CLK1-214ENST00000496205 FLNCQ14315 2725 aa0.94□□□□□ -2.26
CLK1-214ENST00000496205 TPRP12270 2363 aaKnown RBP0.93□□□□□ -2.26
CLK1-214ENST00000496205 CEP295Q9C0D2 2601 aa0.93□□□□□ -2.26
CLK1-214ENST00000496205 CHD6Q8TD26 2715 aa0.93□□□□□ -2.26
CLK1-214ENST00000496205 HIVEP3Q5T1R4 2406 aa0.93□□□□□ -2.26
CLK1-214ENST00000496205 LCE6AA0A183 80 aa0.93□□□□□ -2.26
CLK1-214ENST00000496205 I3L2K1 104 aa0.93□□□□□ -2.26
CLK1-214ENST00000496205 SPINK4O60575 86 aa0.93□□□□□ -2.26
CLK1-214ENST00000496205 USMG5Q96IX5 58 aa0.93□□□□□ -2.26
CLK1-214ENST00000496205 AKAP13Q12802 2813 aa0.93□□□□□ -2.26
CLK1-214ENST00000496205 SPTBN1Q01082 2364 aaKnown RBP0.93□□□□□ -2.26
CLK1-214ENST00000496205 PTPRZ1P23471 2315 aaPredicted RBP0.93□□□□□ -2.26
CLK1-214ENST00000496205 PCNX1Q96RV3 2341 aa0.93□□□□□ -2.26
CLK1-214ENST00000496205 MAP1AP78559 2803 aaPredicted RBP0.93□□□□□ -2.26
CLK1-214ENST00000496205 JMJD1CQ15652 2540 aa0.92□□□□□ -2.26
CLK1-214ENST00000496205 CELSR1Q9NYQ6 3014 aa0.92□□□□□ -2.26
CLK1-214ENST00000496205 PTPRQQ9UMZ3 2332 aa0.92□□□□□ -2.26
CLK1-214ENST00000496205 CHD8Q9HCK8 2581 aa0.92□□□□□ -2.26
CLK1-214ENST00000496205 ABRACLQ9P1F3 81 aa0.92□□□□□ -2.26
CLK1-214ENST00000496205 CENPEQ02224 2701 aa0.92□□□□□ -2.26
CLK1-214ENST00000496205 ITPR2Q14571 2701 aa0.92□□□□□ -2.26
CLK1-214ENST00000496205 MXRA5Q9NR99 2828 aa0.92□□□□□ -2.26
CLK1-214ENST00000496205 EPG5Q9HCE0 2579 aa0.92□□□□□ -2.26
CLK1-214ENST00000496205 PLCE1Q9P212 2302 aa0.92□□□□□ -2.26
CLK1-214ENST00000496205 LRBAP50851 2863 aa0.91□□□□□ -2.26
CLK1-214ENST00000496205 IGSF10Q6WRI0 2623 aa0.91□□□□□ -2.26
CLK1-214ENST00000496205 CMYA5Q8N3K9 4069 aa0.91□□□□□ -2.26
CLK1-214ENST00000496205 I3L3M4 83 aa0.91□□□□□ -2.26
CLK1-214ENST00000496205 PRO0255Q9UI72 69 aa0.91□□□□□ -2.26
CLK1-214ENST00000496205 NF1P21359 2839 aa0.91□□□□□ -2.26
CLK1-214ENST00000496205 ACACBO00763 2458 aa0.91□□□□□ -2.26
CLK1-214ENST00000496205 UBR5O95071 2799 aaPredicted RBP0.91□□□□□ -2.26
CLK1-214ENST00000496205 APC2O95996 2303 aa0.9□□□□□ -2.26
CLK1-214ENST00000496205 FAM208BQ5VWN6 2430 aa0.9□□□□□ -2.26
CLK1-214ENST00000496205 USP24Q9UPU5 2620 aa0.9□□□□□ -2.26
CLK1-214ENST00000496205 SPTBN2O15020 2390 aa0.9□□□□□ -2.27
CLK1-214ENST00000496205 MYO18BQ8IUG5 2567 aa0.9□□□□□ -2.27
CLK1-214ENST00000496205 UTP20O75691 2785 aaKnown RBP0.9□□□□□ -2.27
CLK1-214ENST00000496205 HRNRQ86YZ3 2850 aaPredicted RBP0.9□□□□□ -2.27
CLK1-214ENST00000496205 RPL38P63173 70 aaKnown RBP0.9□□□□□ -2.27
CLK1-214ENST00000496205 Q8IZM0 81 aa0.9□□□□□ -2.27
CLK1-214ENST00000496205 SPTA1P02549 2419 aa0.9□□□□□ -2.27
CLK1-214ENST00000496205 ZANQ9Y493 2812 aa0.9□□□□□ -2.27
CLK1-214ENST00000496205 CUBNO60494 3623 aa0.9□□□□□ -2.27
CLK1-214ENST00000496205 URB1O60287 2271 aaKnown RBP0.9□□□□□ -2.27
CLK1-214ENST00000496205 NBASA2RRP1 2371 aa0.9□□□□□ -2.27
CLK1-214ENST00000496205 PTPN13Q12923 2485 aa0.9□□□□□ -2.27
CLK1-214ENST00000496205 PKD1L2Q7Z442 2459 aa0.9□□□□□ -2.27
CLK1-214ENST00000496205 USP9XQ93008 2570 aaPredicted RBP0.9□□□□□ -2.27
CLK1-214ENST00000496205 APCP25054 2843 aa0.89□□□□□ -2.27
CLK1-214ENST00000496205 DNAH3Q8TD57 4116 aa0.89□□□□□ -2.27
CLK1-214ENST00000496205 SPTY2D1-AS1A0A0U1RR47 76 aa0.89□□□□□ -2.27
CLK1-214ENST00000496205 SMIM27A0A1W2PRY6 76 aa0.89□□□□□ -2.27
CLK1-214ENST00000496205 IGIPA6NJ69 53 aa0.89□□□□□ -2.27
CLK1-214ENST00000496205 PLNP26678 52 aa0.89□□□□□ -2.27
CLK1-214ENST00000496205 PRB3Q04118 309 aaPredicted RBP0.89□□□□□ -2.27
CLK1-214ENST00000496205 LRRK2Q5S007 2527 aa0.89□□□□□ -2.27
CLK1-214ENST00000496205 TRRAPQ9Y4A5 3859 aa0.89□□□□□ -2.27
CLK1-214ENST00000496205 GCN1Q92616 2671 aaKnown RBP0.89□□□□□ -2.27
CLK1-214ENST00000496205 SPTAN1Q13813 2472 aaKnown RBP0.89□□□□□ -2.27
CLK1-214ENST00000496205 OTOGQ6ZRI0 2925 aa0.88□□□□□ -2.27
CLK1-214ENST00000496205 LYSTQ99698 3801 aa0.88□□□□□ -2.27
CLK1-214ENST00000496205 USF3Q68DE3 2245 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms