RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 C3orf22Q8N5N4 141 aa10.18□□□□□ -0.78
LIME1-208ENST00000493265 IGLV5-48A0A075B6I7 105 aa10.17□□□□□ -0.78
LIME1-208ENST00000493265 Q8N377 158 aa10.17□□□□□ -0.78
LIME1-208ENST00000493265 FABP2P12104 132 aa10.16□□□□□ -0.78
LIME1-208ENST00000493265 SPRR1BP22528 89 aa10.16□□□□□ -0.78
LIME1-208ENST00000493265 ATXN8Q156A1 80 aa10.16□□□□□ -0.78
LIME1-208ENST00000493265 KRTAP13-2Q52LG2 175 aa10.16□□□□□ -0.78
LIME1-208ENST00000493265 MT1HL1P0DM35 61 aa10.15□□□□□ -0.78
LIME1-208ENST00000493265 C9orf153Q5TBE3 101 aa10.15□□□□□ -0.78
LIME1-208ENST00000493265 TYMSOSQ8TAI1 123 aa10.15□□□□□ -0.78
LIME1-208ENST00000493265 LAMTOR3Q9UHA4 124 aa10.15□□□□□ -0.78
LIME1-208ENST00000493265 TRACP01848 142 aa10.14□□□□□ -0.79
LIME1-208ENST00000493265 MOBPQ13875 183 aa10.13□□□□□ -0.79
LIME1-208ENST00000493265 OCIAD2Q56VL3 154 aa10.13□□□□□ -0.79
LIME1-208ENST00000493265 ORMDL1Q9P0S3 153 aa10.13□□□□□ -0.79
LIME1-208ENST00000493265 TRBV20-1A0A075B6N2 111 aa10.12□□□□□ -0.79
LIME1-208ENST00000493265 SMIM29Q86T20 159 aa10.12□□□□□ -0.79
LIME1-208ENST00000493265 KRTAP10-8P60410 259 aa10.11□□□□□ -0.79
LIME1-208ENST00000493265 SPCS1Q9Y6A9 102 aa10.1□□□□□ -0.79
LIME1-208ENST00000493265 F8WEM9 126 aa10.09□□□□□ -0.79
LIME1-208ENST00000493265 LRP2P98164 4655 aa10.09□□□□□ -0.79
LIME1-208ENST00000493265 RNF213Q63HN8 5207 aa10.09□□□□□ -0.79
LIME1-208ENST00000493265 GHRHP01286 108 aa10.08□□□□□ -0.8
LIME1-208ENST00000493265 PPDPFLQ8WWR9 84 aa10.08□□□□□ -0.8
LIME1-208ENST00000493265 TNXBP22105 4242 aa10.08□□□□□ -0.8
LIME1-208ENST00000493265 H3BMG7 143 aa10.07□□□□□ -0.8
LIME1-208ENST00000493265 BAALC-AS2P0C853 105 aa10.07□□□□□ -0.8
LIME1-208ENST00000493265 Q8NBF4 154 aa10.07□□□□□ -0.8
LIME1-208ENST00000493265 A0A1B0GV72 72 aa10.06□□□□□ -0.8
LIME1-208ENST00000493265 C9JAW5 83 aa10.06□□□□□ -0.8
LIME1-208ENST00000493265 NDUFV3P56181 108 aaKnown RBP10.06□□□□□ -0.8
LIME1-208ENST00000493265 MTURNQ8N3F0 131 aa10.05□□□□□ -0.8
LIME1-208ENST00000493265 TMEM256-PLSCR3K7ERE1 68 aa10.04□□□□□ -0.8
LIME1-208ENST00000493265 A0A0G2JQZ4 141 aa10.03□□□□□ -0.8
LIME1-208ENST00000493265 H3BQ85 93 aa10.03□□□□□ -0.8
LIME1-208ENST00000493265 SSBP3-AS1Q7Z2R9 100 aa10.03□□□□□ -0.8
LIME1-208ENST00000493265 K7EP34 96 aa10.02□□□□□ -0.81
LIME1-208ENST00000493265 LINC00304Q8N9R0 145 aa10.02□□□□□ -0.81
LIME1-208ENST00000493265 C4orf48Q5BLP8 95 aa10□□□□□ -0.81
LIME1-208ENST00000493265 HRCT1Q6UXD1 115 aa10□□□□□ -0.81
LIME1-208ENST00000493265 ANKRD29Q8N6D5 301 aa9.99□□□□□ -0.81
LIME1-208ENST00000493265 UBE2V1Q13404 147 aa9.98□□□□□ -0.81
LIME1-208ENST00000493265 GTF2H5Q6ZYL4 71 aa9.97□□□□□ -0.81
LIME1-208ENST00000493265 IGLV8-61A0A075B6I0 122 aa9.95□□□□□ -0.82
LIME1-208ENST00000493265 Q6JHZ5 121 aa9.95□□□□□ -0.82
LIME1-208ENST00000493265 IGFL1Q6UW32 110 aa9.95□□□□□ -0.82
LIME1-208ENST00000493265 H3BT86 120 aa9.93□□□□□ -0.82
LIME1-208ENST00000493265 SPAG11AQ6PDA7 123 aa9.93□□□□□ -0.82
LIME1-208ENST00000493265 A0A1B0GV90 55 aa9.92□□□□□ -0.82
LIME1-208ENST00000493265 RBM3P98179 157 aaKnown RBP9.91□□□□□ -0.82
LIME1-208ENST00000493265 SPINK1P00995 79 aa9.89□□□□□ -0.83
LIME1-208ENST00000493265 SMCPP49901 116 aaPredicted RBP9.89□□□□□ -0.83
LIME1-208ENST00000493265 DSCR8Q96T75 97 aa9.88□□□□□ -0.83
LIME1-208ENST00000493265 PRO0461Q9UI25 63 aa9.88□□□□□ -0.83
LIME1-208ENST00000493265 JMJD7-PLA2G4BH0Y9G9 81 aa9.86□□□□□ -0.83
LIME1-208ENST00000493265 CD164Q04900 197 aa9.86□□□□□ -0.83
LIME1-208ENST00000493265 VPS25Q9BRG1 176 aa9.86□□□□□ -0.83
LIME1-208ENST00000493265 C14orf132Q9NPU4 83 aa9.85□□□□□ -0.83
LIME1-208ENST00000493265 RETNLBQ9BQ08 111 aa9.84□□□□□ -0.83
LIME1-208ENST00000493265 TRBV7-4A0A0J9YYF1 115 aa9.83□□□□□ -0.84
LIME1-208ENST00000493265 A0A1W2PNM2 257 aa9.83□□□□□ -0.84
LIME1-208ENST00000493265 CCKP06307 115 aa9.83□□□□□ -0.84
LIME1-208ENST00000493265 TRBV7-7A0A0K0K1E9 115 aa9.82□□□□□ -0.84
LIME1-208ENST00000493265 F8W1H4 67 aa9.82□□□□□ -0.84
LIME1-208ENST00000493265 TEN1Q86WV5 123 aa9.82□□□□□ -0.84
LIME1-208ENST00000493265 LIMD2Q9BT23 127 aa9.82□□□□□ -0.84
LIME1-208ENST00000493265 OBSCN-AS1Q96MR7 158 aa9.81□□□□□ -0.84
LIME1-208ENST00000493265 RPS29P62273 56 aaKnown RBP9.79□□□□□ -0.84
LIME1-208ENST00000493265 LPAP08519 4548 aa9.78□□□□□ -0.84
LIME1-208ENST00000493265 A0A087WSZ3 146 aa9.78□□□□□ -0.84
LIME1-208ENST00000493265 LOC110117498A0A087WWA1 95 aa9.78□□□□□ -0.84
LIME1-208ENST00000493265 Q6Q795 121 aa9.78□□□□□ -0.84
LIME1-208ENST00000493265 Q6ZQT0 140 aa9.78□□□□□ -0.84
LIME1-208ENST00000493265 PRR4Q16378 134 aa9.76□□□□□ -0.85
LIME1-208ENST00000493265 PDE6GP18545 87 aa9.75□□□□□ -0.85
LIME1-208ENST00000493265 ETDBQ3ZM63 59 aa9.75□□□□□ -0.85
LIME1-208ENST00000493265 Q5XG85 94 aa9.71□□□□□ -0.86
LIME1-208ENST00000493265 SS18L2Q9UHA2 77 aa9.71□□□□□ -0.86
LIME1-208ENST00000493265 C1orf195Q5TG92 126 aa9.69□□□□□ -0.86
LIME1-208ENST00000493265 IGLV7-46A0A075B6I9 117 aa9.66□□□□□ -0.86
LIME1-208ENST00000493265 ASB16-AS1Q495Z4 193 aa9.65□□□□□ -0.86
LIME1-208ENST00000493265 C21orf62-AS1Q17RA5 79 aa9.64□□□□□ -0.87
LIME1-208ENST00000493265 FP248Q71RG6 208 aaPredicted RBP9.64□□□□□ -0.87
LIME1-208ENST00000493265 DEFB116Q30KQ4 102 aa9.63□□□□□ -0.87
LIME1-208ENST00000493265 A0A1B0GW54 56 aa9.6□□□□□ -0.87
LIME1-208ENST00000493265 Q96NJ1 140 aa9.6□□□□□ -0.87
LIME1-208ENST00000493265 SIGMAR1Q99720 223 aa9.59□□□□□ -0.87
LIME1-208ENST00000493265 NREPQ16612 68 aa9.58□□□□□ -0.88
LIME1-208ENST00000493265 IGKV4-1P06312 121 aa9.57□□□□□ -0.88
LIME1-208ENST00000493265 LINC00472Q9H8W2 130 aa9.57□□□□□ -0.88
LIME1-208ENST00000493265 MUC2Q02817 5179 aa9.56□□□□□ -0.88
LIME1-208ENST00000493265 C9orf92A6NGG3 77 aa9.54□□□□□ -0.88
LIME1-208ENST00000493265 LINC00846Q9NV44 126 aa9.53□□□□□ -0.88
LIME1-208ENST00000493265 KRTAP13-3Q3SY46 172 aa9.51□□□□□ -0.89
LIME1-208ENST00000493265 Q6ZVQ6 151 aa9.51□□□□□ -0.89
LIME1-208ENST00000493265 TPRXLQ17RH7 258 aa9.5□□□□□ -0.89
LIME1-208ENST00000493265 UBL5Q9BZL1 73 aa9.49□□□□□ -0.89
LIME1-208ENST00000493265 CDIP1Q9H305 208 aa9.49□□□□□ -0.89
LIME1-208ENST00000493265 J3KT08 172 aa9.48□□□□□ -0.89
LIME1-208ENST00000493265 IGHV6-1A0A0B4J1U7 121 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms