RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 LAMTOR3Q9UHA4 124 aa8.76□□□□□ -1.01
PDZRN3-210ENST00000492909 C9orf153Q5TBE3 101 aa8.76□□□□□ -1.01
PDZRN3-210ENST00000492909 Q6ZRX8 168 aa8.76□□□□□ -1.01
PDZRN3-210ENST00000492909 GHRHP01286 108 aa8.74□□□□□ -1.01
PDZRN3-210ENST00000492909 UBL5Q9BZL1 73 aa8.74□□□□□ -1.01
PDZRN3-210ENST00000492909 LRP1BQ9NZR2 4599 aa8.74□□□□□ -1.01
PDZRN3-210ENST00000492909 A0A087WVE0 104 aa8.73□□□□□ -1.01
PDZRN3-210ENST00000492909 PDE6GP18545 87 aa8.73□□□□□ -1.01
PDZRN3-210ENST00000492909 FAM19A1Q7Z5A9 133 aa8.73□□□□□ -1.01
PDZRN3-210ENST00000492909 HAMPP81172 84 aa8.72□□□□□ -1.01
PDZRN3-210ENST00000492909 DSCR8Q96T75 97 aa8.72□□□□□ -1.01
PDZRN3-210ENST00000492909 DHRS4-AS1Q9P1J3 65 aa8.72□□□□□ -1.01
PDZRN3-210ENST00000492909 BCE1O60756 84 aa8.71□□□□□ -1.01
PDZRN3-210ENST00000492909 PRLHP81277 87 aa8.71□□□□□ -1.02
PDZRN3-210ENST00000492909 Q9BRP9 147 aa8.71□□□□□ -1.02
PDZRN3-210ENST00000492909 PSORS1C2Q9UIG4 136 aa8.71□□□□□ -1.02
PDZRN3-210ENST00000492909 CRYGAP11844 174 aa8.7□□□□□ -1.02
PDZRN3-210ENST00000492909 H0Y9J4 135 aa8.69□□□□□ -1.02
PDZRN3-210ENST00000492909 UBE2AP49459 152 aa8.69□□□□□ -1.02
PDZRN3-210ENST00000492909 SERP2Q8N6R1 65 aa8.69□□□□□ -1.02
PDZRN3-210ENST00000492909 KIAA1109Q2LD37 5005 aa8.68□□□□□ -1.02
PDZRN3-210ENST00000492909 TRBV7-4A0A0J9YYF1 115 aa8.68□□□□□ -1.02
PDZRN3-210ENST00000492909 C1orf137Q5JT78 98 aa8.68□□□□□ -1.02
PDZRN3-210ENST00000492909 Q6ZVQ6 151 aa8.66□□□□□ -1.02
PDZRN3-210ENST00000492909 HIGD2AQ9BW72 106 aa8.66□□□□□ -1.02
PDZRN3-210ENST00000492909 DNAH8Q96JB1 4490 aa8.66□□□□□ -1.02
PDZRN3-210ENST00000492909 KRTAP13-1Q8IUC0 172 aa8.65□□□□□ -1.02
PDZRN3-210ENST00000492909 APOBP04114 4563 aaKnown RBP8.65□□□□□ -1.03
PDZRN3-210ENST00000492909 ERC2-IT1O76042 136 aa8.64□□□□□ -1.03
PDZRN3-210ENST00000492909 LINC01547P58512 204 aaPredicted RBP8.63□□□□□ -1.03
PDZRN3-210ENST00000492909 RYR1P21817 5038 aa8.62□□□□□ -1.03
PDZRN3-210ENST00000492909 CDK2AP2O75956 126 aa8.62□□□□□ -1.03
PDZRN3-210ENST00000492909 CXCL6P80162 114 aa8.62□□□□□ -1.03
PDZRN3-210ENST00000492909 SMIM20Q8N5G0 67 aa8.61□□□□□ -1.03
PDZRN3-210ENST00000492909 KRTAP17-1Q9BYP8 105 aa8.61□□□□□ -1.03
PDZRN3-210ENST00000492909 ZNF861PO60384 105 aa8.61□□□□□ -1.03
PDZRN3-210ENST00000492909 IGLV7-43P04211 117 aa8.61□□□□□ -1.03
PDZRN3-210ENST00000492909 ST20-AS1Q8NBB2 130 aa8.61□□□□□ -1.03
PDZRN3-210ENST00000492909 HSPG2P98160 4391 aa8.6□□□□□ -1.03
PDZRN3-210ENST00000492909 DEFB105AQ8NG35 78 aa8.6□□□□□ -1.03
PDZRN3-210ENST00000492909 IGLV5-48A0A075B6I7 105 aa8.58□□□□□ -1.04
PDZRN3-210ENST00000492909 CYSTM1Q9H1C7 97 aa8.58□□□□□ -1.04
PDZRN3-210ENST00000492909 SMR3BP02814 79 aaPredicted RBP8.57□□□□□ -1.04
PDZRN3-210ENST00000492909 Q8N377 158 aa8.57□□□□□ -1.04
PDZRN3-210ENST00000492909 SRRM2Q9UQ35 2752 aaKnown RBP8.56□□□□□ -1.04
PDZRN3-210ENST00000492909 HERC2O95714 4834 aa8.55□□□□□ -1.04
PDZRN3-210ENST00000492909 TMEM258P61165 79 aa8.55□□□□□ -1.04
PDZRN3-210ENST00000492909 RPL37AP61513 92 aaKnown RBP8.55□□□□□ -1.04
PDZRN3-210ENST00000492909 TRAV7A0A075B6U4 112 aa8.53□□□□□ -1.04
PDZRN3-210ENST00000492909 ZNF706Q9Y5V0 76 aaPredicted RBP8.53□□□□□ -1.04
PDZRN3-210ENST00000492909 SPRR4Q96PI1 79 aa8.52□□□□□ -1.05
PDZRN3-210ENST00000492909 SPRR1BP22528 89 aa8.51□□□□□ -1.05
PDZRN3-210ENST00000492909 KRTAP4-5Q9BYR2 181 aa8.5□□□□□ -1.05
PDZRN3-210ENST00000492909 RPS28P62857 69 aaKnown RBP8.5□□□□□ -1.05
PDZRN3-210ENST00000492909 J3KT08 172 aa8.49□□□□□ -1.05
PDZRN3-210ENST00000492909 Q8N1X5 172 aa8.49□□□□□ -1.05
PDZRN3-210ENST00000492909 NREPQ16612 68 aa8.48□□□□□ -1.05
PDZRN3-210ENST00000492909 SMIM29Q86T20 159 aa8.48□□□□□ -1.05
PDZRN3-210ENST00000492909 FAT1Q14517 4588 aa8.48□□□□□ -1.05
PDZRN3-210ENST00000492909 A0A1B0GW54 56 aa8.48□□□□□ -1.05
PDZRN3-210ENST00000492909 LINC00483Q53H64 154 aa8.48□□□□□ -1.05
PDZRN3-210ENST00000492909 C20orf197Q8N268 126 aa8.48□□□□□ -1.05
PDZRN3-210ENST00000492909 F8WEM9 126 aa8.47□□□□□ -1.05
PDZRN3-210ENST00000492909 Q5VSD8 79 aa8.46□□□□□ -1.05
PDZRN3-210ENST00000492909 VPS13BQ7Z7G8 4022 aa8.46□□□□□ -1.06
PDZRN3-210ENST00000492909 FAM229AH3BQW9 127 aa8.45□□□□□ -1.06
PDZRN3-210ENST00000492909 PLA2G1BP04054 148 aaKnown RBP8.45□□□□□ -1.06
PDZRN3-210ENST00000492909 IGKV4-1P06312 121 aa8.45□□□□□ -1.06
PDZRN3-210ENST00000492909 KRTAP10-4P60372 401 aaPredicted RBP8.45□□□□□ -1.06
PDZRN3-210ENST00000492909 SPINK6Q6UWN8 80 aa8.45□□□□□ -1.06
PDZRN3-210ENST00000492909 A0A1W2PNM2 257 aa8.43□□□□□ -1.06
PDZRN3-210ENST00000492909 BPY2O14599 106 aa8.43□□□□□ -1.06
PDZRN3-210ENST00000492909 ANAPC11Q9NYG5 84 aa8.43□□□□□ -1.06
PDZRN3-210ENST00000492909 KLKP1Q107X0 134 aa8.42□□□□□ -1.06
PDZRN3-210ENST00000492909 Q8NBF4 154 aa8.42□□□□□ -1.06
PDZRN3-210ENST00000492909 IGLV8-61A0A075B6I0 122 aa8.41□□□□□ -1.06
PDZRN3-210ENST00000492909 Q8N9L7 120 aa8.4□□□□□ -1.06
PDZRN3-210ENST00000492909 IGLV9-49A0A0B4J1Y8 123 aa8.4□□□□□ -1.07
PDZRN3-210ENST00000492909 ABCA13Q86UQ4 5058 aa8.39□□□□□ -1.07
PDZRN3-210ENST00000492909 H7BZZ5 65 aa8.38□□□□□ -1.07
PDZRN3-210ENST00000492909 FAM236DA0A1B0GTK5 79 aa8.38□□□□□ -1.07
PDZRN3-210ENST00000492909 KRTAP1-4P0C5Y4 121 aa8.38□□□□□ -1.07
PDZRN3-210ENST00000492909 FAM236CP0DP71 79 aa8.38□□□□□ -1.07
PDZRN3-210ENST00000492909 FAM229BQ4G0N7 80 aa8.38□□□□□ -1.07
PDZRN3-210ENST00000492909 IGFL1Q6UW32 110 aa8.37□□□□□ -1.07
PDZRN3-210ENST00000492909 MOBPQ13875 183 aa8.36□□□□□ -1.07
PDZRN3-210ENST00000492909 SNURFQ9Y675 71 aa8.35□□□□□ -1.07
PDZRN3-210ENST00000492909 OXTP01178 125 aa8.35□□□□□ -1.07
PDZRN3-210ENST00000492909 PCLOQ9Y6V0 5065 aa8.35□□□□□ -1.07
PDZRN3-210ENST00000492909 A0A087X002 238 aa8.34□□□□□ -1.07
PDZRN3-210ENST00000492909 NDUFC1O43677 76 aa8.34□□□□□ -1.07
PDZRN3-210ENST00000492909 OCR1Q9BZK8 76 aa8.34□□□□□ -1.07
PDZRN3-210ENST00000492909 A0A0G2JQZ4 141 aa8.33□□□□□ -1.08
PDZRN3-210ENST00000492909 TMEM254Q8TBM7 123 aa8.31□□□□□ -1.08
PDZRN3-210ENST00000492909 KRTAP13-2Q52LG2 175 aa8.3□□□□□ -1.08
PDZRN3-210ENST00000492909 SSBP3-AS1Q7Z2R9 100 aa8.3□□□□□ -1.08
PDZRN3-210ENST00000492909 DSCR10P59022 87 aa8.3□□□□□ -1.08
PDZRN3-210ENST00000492909 SERP1Q9Y6X1 66 aa8.3□□□□□ -1.08
PDZRN3-210ENST00000492909 A0A0U1RQV1 116 aa8.27□□□□□ -1.08
PDZRN3-210ENST00000492909 C5orf47Q569G3 176 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms