RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 OBSCN-AS1Q96MR7 158 aa5.66□□□□□ -1.5
SND1-215ENST00000492772 HIST1H2BNQ99877 126 aa5.66□□□□□ -1.5
SND1-215ENST00000492772 HIST1H2BMQ99879 126 aa5.66□□□□□ -1.5
SND1-215ENST00000492772 LINC01545Q5VT33 79 aa5.65□□□□□ -1.5
SND1-215ENST00000492772 SYS1-DBNDD2H3BUS1 97 aa5.64□□□□□ -1.51
SND1-215ENST00000492772 COA6Q5JTJ3 125 aaKnown RBP5.64□□□□□ -1.51
SND1-215ENST00000492772 TRBV7-7A0A0K0K1E9 115 aa5.63□□□□□ -1.51
SND1-215ENST00000492772 A6NDN8 102 aa5.63□□□□□ -1.51
SND1-215ENST00000492772 Q6JHZ5 121 aa5.63□□□□□ -1.51
SND1-215ENST00000492772 CLEC2BQ92478 149 aa5.63□□□□□ -1.51
SND1-215ENST00000492772 TRBV20-1A0A075B6N2 111 aa5.62□□□□□ -1.51
SND1-215ENST00000492772 PET117Q6UWS5 81 aa5.62□□□□□ -1.51
SND1-215ENST00000492772 IFITM1P13164 125 aa5.61□□□□□ -1.51
SND1-215ENST00000492772 SMCPP49901 116 aaPredicted RBP5.61□□□□□ -1.51
SND1-215ENST00000492772 SCGB1D4Q6XE38 83 aa5.61□□□□□ -1.51
SND1-215ENST00000492772 TTTY13Q9BZ97 58 aa5.61□□□□□ -1.51
SND1-215ENST00000492772 MACF1Q9UPN3 7388 aaKnown RBP5.6□□□□□ -1.51
SND1-215ENST00000492772 KRTAP19-1Q8IUB9 90 aa5.6□□□□□ -1.51
SND1-215ENST00000492772 TRAV13-2A0A0B4J235 113 aa5.59□□□□□ -1.51
SND1-215ENST00000492772 MT2AP02795 61 aa5.59□□□□□ -1.51
SND1-215ENST00000492772 IGFL1Q6UW32 110 aa5.59□□□□□ -1.51
SND1-215ENST00000492772 Q6ZVH6 145 aa5.59□□□□□ -1.51
SND1-215ENST00000492772 Q96NJ1 140 aa5.59□□□□□ -1.51
SND1-215ENST00000492772 C3orf79P0CE67 100 aa5.58□□□□□ -1.52
SND1-215ENST00000492772 SMIM11BQ8TCY0 68 aa5.58□□□□□ -1.52
SND1-215ENST00000492772 C20orf166-AS1Q96NR2 134 aa5.58□□□□□ -1.52
SND1-215ENST00000492772 SYNE2Q8WXH0 6885 aaKnown RBP5.57□□□□□ -1.52
SND1-215ENST00000492772 LST1O00453 97 aa5.57□□□□□ -1.52
SND1-215ENST00000492772 VAMP3Q15836 100 aa5.57□□□□□ -1.52
SND1-215ENST00000492772 A8MUU9 505 aa5.56□□□□□ -1.52
SND1-215ENST00000492772 LCE2BO14633 110 aa5.56□□□□□ -1.52
SND1-215ENST00000492772 Q6ZQY7 126 aa5.56□□□□□ -1.52
SND1-215ENST00000492772 OCIAD2Q56VL3 154 aa5.55□□□□□ -1.52
SND1-215ENST00000492772 LINC00575Q6W349 94 aa5.55□□□□□ -1.52
SND1-215ENST00000492772 MUSTN1Q8IVN3 82 aa5.55□□□□□ -1.52
SND1-215ENST00000492772 FAM236DA0A1B0GTK5 79 aa5.54□□□□□ -1.52
SND1-215ENST00000492772 hADV29S1A0JD25 119 aa5.54□□□□□ -1.52
SND1-215ENST00000492772 MT1FP04733 61 aa5.54□□□□□ -1.52
SND1-215ENST00000492772 FAM236CP0DP71 79 aa5.54□□□□□ -1.52
SND1-215ENST00000492772 SS18L2Q9UHA2 77 aa5.54□□□□□ -1.52
SND1-215ENST00000492772 PPDPFLQ8WWR9 84 aa5.53□□□□□ -1.52
SND1-215ENST00000492772 SCGB1D1O95968 90 aa5.52□□□□□ -1.53
SND1-215ENST00000492772 ANKRD39Q53RE8 183 aa5.52□□□□□ -1.53
SND1-215ENST00000492772 KRTAP9-3Q9BYQ3 159 aa5.52□□□□□ -1.53
SND1-215ENST00000492772 LINC00846Q9NV44 126 aa5.52□□□□□ -1.53
SND1-215ENST00000492772 KRTAP10-10P60014 251 aa5.51□□□□□ -1.53
SND1-215ENST00000492772 KRTDAPP60985 99 aa5.51□□□□□ -1.53
SND1-215ENST00000492772 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.5□□□□□ -1.53
SND1-215ENST00000492772 SNHG12Q9BXW3 62 aa5.49□□□□□ -1.53
SND1-215ENST00000492772 H3BUT2 72 aa5.48□□□□□ -1.53
SND1-215ENST00000492772 SNRPEP62304 92 aaKnown RBP5.48□□□□□ -1.53
SND1-215ENST00000492772 RBM12B-AS1Q9P1G2 102 aa5.48□□□□□ -1.53
SND1-215ENST00000492772 MPLKIPQ8TAP9 179 aa5.46□□□□□ -1.54
SND1-215ENST00000492772 DSCR10P59022 87 aa5.45□□□□□ -1.54
SND1-215ENST00000492772 BVES-AS1Q5T3Y7 98 aa5.45□□□□□ -1.54
SND1-215ENST00000492772 TEN1Q86WV5 123 aa5.45□□□□□ -1.54
SND1-215ENST00000492772 ATOH7Q8N100 152 aa5.45□□□□□ -1.54
SND1-215ENST00000492772 HRES1P13985 223 aa5.44□□□□□ -1.54
SND1-215ENST00000492772 KRTAP19-6Q3LI70 58 aa5.44□□□□□ -1.54
SND1-215ENST00000492772 HIST3H2BBQ8N257 126 aa5.44□□□□□ -1.54
SND1-215ENST00000492772 HIST1H2BLQ99880 126 aa5.44□□□□□ -1.54
SND1-215ENST00000492772 A0A087WSZ3 146 aa5.43□□□□□ -1.54
SND1-215ENST00000492772 KRTAP16-1A8MUX0 517 aa5.43□□□□□ -1.54
SND1-215ENST00000492772 SIGMAR1Q99720 223 aa5.43□□□□□ -1.54
SND1-215ENST00000492772 C12orf57Q99622 126 aa5.42□□□□□ -1.54
SND1-215ENST00000492772 GHRHP01286 108 aa5.41□□□□□ -1.54
SND1-215ENST00000492772 LINC00313P59037 77 aa5.4□□□□□ -1.54
SND1-215ENST00000492772 SNCGO76070 127 aa5.39□□□□□ -1.55
SND1-215ENST00000492772 MTURNQ8N3F0 131 aa5.39□□□□□ -1.55
SND1-215ENST00000492772 NDUFV3P56181 108 aaKnown RBP5.38□□□□□ -1.55
SND1-215ENST00000492772 KRTAP6-3Q3LI67 103 aa5.38□□□□□ -1.55
SND1-215ENST00000492772 NOTCH2NLQ7Z3S9 236 aa5.37□□□□□ -1.55
SND1-215ENST00000492772 S100A1P23297 94 aa5.36□□□□□ -1.55
SND1-215ENST00000492772 S100A2P29034 98 aa5.36□□□□□ -1.55
SND1-215ENST00000492772 HSBP1L1C9JCN9 74 aa5.35□□□□□ -1.55
SND1-215ENST00000492772 DLEU1O43261 78 aa5.35□□□□□ -1.55
SND1-215ENST00000492772 IGKV4-1P06312 121 aa5.35□□□□□ -1.55
SND1-215ENST00000492772 H3BMG7 143 aa5.34□□□□□ -1.55
SND1-215ENST00000492772 A8MWP4 228 aa5.33□□□□□ -1.56
SND1-215ENST00000492772 H0YGX0 51 aa5.33□□□□□ -1.56
SND1-215ENST00000492772 COX8AP10176 69 aa5.33□□□□□ -1.56
SND1-215ENST00000492772 A0A1W2PNM2 257 aa5.32□□□□□ -1.56
SND1-215ENST00000492772 HIST1H4GQ99525 98 aa5.32□□□□□ -1.56
SND1-215ENST00000492772 TRBV7-4A0A0J9YYF1 115 aa5.3□□□□□ -1.56
SND1-215ENST00000492772 S100A6P06703 90 aa5.3□□□□□ -1.56
SND1-215ENST00000492772 FABP2P12104 132 aa5.3□□□□□ -1.56
SND1-215ENST00000492772 FAM218AQ96MZ4 157 aa5.3□□□□□ -1.56
SND1-215ENST00000492772 HIGD1BQ9P298 99 aa5.3□□□□□ -1.56
SND1-215ENST00000492772 NEBP20929 6669 aa5.29□□□□□ -1.56
SND1-215ENST00000492772 IGHV6-1A0A0B4J1U7 121 aa5.29□□□□□ -1.56
SND1-215ENST00000492772 A0A1B0GX51 115 aa5.29□□□□□ -1.56
SND1-215ENST00000492772 RAB37Q96AX2 223 aa5.29□□□□□ -1.56
SND1-215ENST00000492772 A0A0B4J2C4 111 aa5.27□□□□□ -1.57
SND1-215ENST00000492772 C2orf91Q6ZV80 131 aa5.27□□□□□ -1.57
SND1-215ENST00000492772 ANKRD29Q8N6D5 301 aa5.27□□□□□ -1.57
SND1-215ENST00000492772 ZCCHC13Q8WW36 166 aaKnown RBP5.27□□□□□ -1.57
SND1-215ENST00000492772 LINC00472Q9H8W2 130 aa5.27□□□□□ -1.57
SND1-215ENST00000492772 C8orf87E5RJ46 101 aa5.26□□□□□ -1.57
SND1-215ENST00000492772 SPINK7P58062 85 aa5.26□□□□□ -1.57
SND1-215ENST00000492772 DEFB116Q30KQ4 102 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms