RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 LRRC9Q6ZRR7 1453 aa-0.86□□□□□ -2.55
CD46-216ENST00000490278 UQCRHLA0A096LP55 91 aa-0.86□□□□□ -2.55
CD46-216ENST00000490278 NDUFC1O43677 76 aa-0.86□□□□□ -2.55
CD46-216ENST00000490278 ACYP1P07311 99 aa-0.86□□□□□ -2.55
CD46-216ENST00000490278 ZNF720Q7Z2F6 126 aa-0.86□□□□□ -2.55
CD46-216ENST00000490278 RGPD3A6NKT7 1758 aaPredicted RBP-0.86□□□□□ -2.55
CD46-216ENST00000490278 RGPD4Q7Z3J3 1758 aa-0.86□□□□□ -2.55
CD46-216ENST00000490278 RAPGEF2Q9Y4G8 1499 aa-0.86□□□□□ -2.55
CD46-216ENST00000490278 TRAV21A0A0B4J279 112 aa-0.87□□□□□ -2.55
CD46-216ENST00000490278 LINC00587B1AMM8 73 aa-0.87□□□□□ -2.55
CD46-216ENST00000490278 H3BQ15 152 aa-0.87□□□□□ -2.55
CD46-216ENST00000490278 DEFB130BP0DP73 79 aa-0.87□□□□□ -2.55
CD46-216ENST00000490278 DEFB130AP0DP74 79 aa-0.87□□□□□ -2.55
CD46-216ENST00000490278 KRTAP19-5Q3LI72 72 aa-0.87□□□□□ -2.55
CD46-216ENST00000490278 CFAP46Q8IYW2 2715 aa-0.87□□□□□ -2.55
CD46-216ENST00000490278 MGAQ8IWI9 3026 aa-0.87□□□□□ -2.55
CD46-216ENST00000490278 COL6A5A8TX70 2615 aa-0.88□□□□□ -2.55
CD46-216ENST00000490278 ATOX1O00244 68 aa-0.88□□□□□ -2.55
CD46-216ENST00000490278 IAPPP10997 89 aa-0.88□□□□□ -2.55
CD46-216ENST00000490278 TEX14Q8IWB6 1497 aa-0.88□□□□□ -2.55
CD46-216ENST00000490278 ANKRD36CQ5JPF3 1778 aa-0.88□□□□□ -2.55
CD46-216ENST00000490278 DMXL2Q8TDJ6 3036 aa-0.89□□□□□ -2.55
CD46-216ENST00000490278 SUPT6HQ7KZ85 1726 aaKnown RBP-0.89□□□□□ -2.55
CD46-216ENST00000490278 A0A1B0GUT8 65 aa-0.89□□□□□ -2.55
CD46-216ENST00000490278 C20orf202A1L168 122 aa-0.89□□□□□ -2.55
CD46-216ENST00000490278 C3orf79P0CE67 100 aa-0.89□□□□□ -2.55
CD46-216ENST00000490278 COX6B2Q6YFQ2 88 aa-0.89□□□□□ -2.55
CD46-216ENST00000490278 MPC2O95563 127 aa-0.9□□□□□ -2.55
CD46-216ENST00000490278 DOT1LQ8TEK3 1739 aa-0.9□□□□□ -2.55
CD46-216ENST00000490278 ABCA13Q86UQ4 5058 aa-0.9□□□□□ -2.55
CD46-216ENST00000490278 PRDM15P57071 1507 aaPredicted RBP-0.9□□□□□ -2.55
CD46-216ENST00000490278 ABCC2Q92887 1545 aa-0.9□□□□□ -2.55
CD46-216ENST00000490278 RGPD8O14715 1765 aaPredicted RBP-0.91□□□□□ -2.55
CD46-216ENST00000490278 RGPD5Q99666 1765 aa-0.91□□□□□ -2.55
CD46-216ENST00000490278 PLXNC1O60486 1568 aa-0.91□□□□□ -2.55
CD46-216ENST00000490278 SMR3BP02814 79 aaPredicted RBP-0.91□□□□□ -2.56
CD46-216ENST00000490278 IFI6P09912 130 aa-0.91□□□□□ -2.56
CD46-216ENST00000490278 MT1XP80297 61 aa-0.91□□□□□ -2.56
CD46-216ENST00000490278 MRPS10P82664 201 aaKnown RBP-0.91□□□□□ -2.56
CD46-216ENST00000490278 PLGLAQ15195 96 aa-0.91□□□□□ -2.56
CD46-216ENST00000490278 EIF4G3O43432 1585 aaKnown RBP-0.91□□□□□ -2.56
CD46-216ENST00000490278 POLR1AO95602 1720 aaPredicted RBP-0.92□□□□□ -2.56
CD46-216ENST00000490278 NESP48681 1621 aa-0.92□□□□□ -2.56
CD46-216ENST00000490278 CYB5AP00167 134 aa-0.92□□□□□ -2.56
CD46-216ENST00000490278 HMGN3Q15651 99 aa-0.92□□□□□ -2.56
CD46-216ENST00000490278 ALKAL2Q6UX46 152 aa-0.92□□□□□ -2.56
CD46-216ENST00000490278 C2orf88Q9BSF0 95 aa-0.92□□□□□ -2.56
CD46-216ENST00000490278 CLTCQ00610 1675 aaKnown RBP-0.92□□□□□ -2.56
CD46-216ENST00000490278 ZNF831Q5JPB2 1677 aa-0.92□□□□□ -2.56
CD46-216ENST00000490278 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.92□□□□□ -2.56
CD46-216ENST00000490278 TIAM2Q8IVF5 1701 aa-0.92□□□□□ -2.56
CD46-216ENST00000490278 ATMQ13315 3056 aa-0.92□□□□□ -2.56
CD46-216ENST00000490278 PLIN4Q96Q06 1357 aa-0.93□□□□□ -2.56
CD46-216ENST00000490278 NEXMIFQ5QGS0 1516 aa-0.93□□□□□ -2.56
CD46-216ENST00000490278 ATP6V1G2-DDX39BF2Z307 99 aa-0.93□□□□□ -2.56
CD46-216ENST00000490278 HMGN2P05204 90 aaKnown RBP-0.93□□□□□ -2.56
CD46-216ENST00000490278 PEA15Q15121 130 aa-0.93□□□□□ -2.56
CD46-216ENST00000490278 NCMAPQ5T1S8 102 aa-0.93□□□□□ -2.56
CD46-216ENST00000490278 CLPSL2Q6UWE3 100 aa-0.93□□□□□ -2.56
CD46-216ENST00000490278 NWD1Q149M9 1564 aa-0.93□□□□□ -2.56
CD46-216ENST00000490278 CSMD2Q7Z408 3487 aa-0.93□□□□□ -2.56
CD46-216ENST00000490278 ATP7BP35670 1465 aa-0.93□□□□□ -2.56
CD46-216ENST00000490278 LTN1O94822 1766 aa-0.93□□□□□ -2.56
CD46-216ENST00000490278 ZFYVE16Q7Z3T8 1539 aa-0.94□□□□□ -2.56
CD46-216ENST00000490278 C20orf78Q9BR46 151 aa-0.94□□□□□ -2.56
CD46-216ENST00000490278 MAGI3Q5TCQ9 1506 aa-0.94□□□□□ -2.56
CD46-216ENST00000490278 UBR1Q8IWV7 1749 aa-0.95□□□□□ -2.56
CD46-216ENST00000490278 MT1GP13640 62 aa-0.95□□□□□ -2.56
CD46-216ENST00000490278 NCOA2Q15596 1464 aa-0.95□□□□□ -2.56
CD46-216ENST00000490278 DPY30Q9C005 99 aa-0.96□□□□□ -2.56
CD46-216ENST00000490278 PARP4Q9UKK3 1724 aaKnown RBP-0.96□□□□□ -2.56
CD46-216ENST00000490278 WIZO95785 1651 aa-0.97□□□□□ -2.56
CD46-216ENST00000490278 FYCO1Q9BQS8 1478 aa-0.97□□□□□ -2.56
CD46-216ENST00000490278 MYMXA0A1B0GTQ4 84 aa-0.97□□□□□ -2.56
CD46-216ENST00000490278 LYNX1G3V0Z9 82 aa-0.97□□□□□ -2.56
CD46-216ENST00000490278 NDUFA4O00483 81 aa-0.97□□□□□ -2.56
CD46-216ENST00000490278 SFTA3P0C7M3 94 aa-0.97□□□□□ -2.56
CD46-216ENST00000490278 LINC00032P0C843 101 aa-0.97□□□□□ -2.56
CD46-216ENST00000490278 IFI27P40305 119 aaPredicted RBP-0.97□□□□□ -2.56
CD46-216ENST00000490278 C14orf144Q96I85 54 aa-0.97□□□□□ -2.56
CD46-216ENST00000490278 DEPDC5O75140 1603 aa-0.97□□□□□ -2.57
CD46-216ENST00000490278 CCNB3Q8WWL7 1395 aa-0.97□□□□□ -2.57
CD46-216ENST00000490278 DDX60LQ5H9U9 1706 aaKnown RBP-0.98□□□□□ -2.57
CD46-216ENST00000490278 TNP1P09430 55 aa-0.98□□□□□ -2.57
CD46-216ENST00000490278 SMIM11AP58511 58 aa-0.98□□□□□ -2.57
CD46-216ENST00000490278 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.98□□□□□ -2.57
CD46-216ENST00000490278 CDC42BPAQ5VT25 1732 aa-0.98□□□□□ -2.57
CD46-216ENST00000490278 TOGARAM1Q9Y4F4 1720 aa-0.98□□□□□ -2.57
CD46-216ENST00000490278 CNTLNQ9NXG0 1405 aa-0.98□□□□□ -2.57
CD46-216ENST00000490278 ATP10BO94823 1461 aa-0.99□□□□□ -2.57
CD46-216ENST00000490278 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.99□□□□□ -2.57
CD46-216ENST00000490278 PLCH1Q4KWH8 1693 aa-0.99□□□□□ -2.57
CD46-216ENST00000490278 TLN1Q9Y490 2541 aaKnown RBP-0.99□□□□□ -2.57
CD46-216ENST00000490278 MMP24-AS1A0A0U1RRL7 71 aa-0.99□□□□□ -2.57
CD46-216ENST00000490278 CEBPZOSA8MTT3 80 aa-0.99□□□□□ -2.57
CD46-216ENST00000490278 UMAD1C9J7I0 102 aa-0.99□□□□□ -2.57
CD46-216ENST00000490278 NCBP2-AS2Q69YL0 99 aa-0.99□□□□□ -2.57
CD46-216ENST00000490278 BOD1L1Q8NFC6 3051 aa-0.99□□□□□ -2.57
CD46-216ENST00000490278 MYO3AQ8NEV4 1616 aa-1□□□□□ -2.57
CD46-216ENST00000490278 ARFGEF2Q9Y6D5 1785 aa-1□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms