RNA–Protein interactions for RNA: ENST00000489621.1

PDCL3P4-201, Transcript of phosducin-like 3 pseudogene 4, humanhuman

BASIC

Gene PDCL3P4, Length 720 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCL3P4-201ENST00000489621 C9orf129Q5T035 196 aaKnown RBP3.78□□□□□ -1.8
PDCL3P4-201ENST00000489621 SMIM20Q8N5G0 67 aa3.78□□□□□ -1.8
PDCL3P4-201ENST00000489621 LINC00526Q96FQ7 95 aa3.78□□□□□ -1.8
PDCL3P4-201ENST00000489621 LAMTOR3Q9UHA4 124 aa3.78□□□□□ -1.8
PDCL3P4-201ENST00000489621 KIAA1109Q2LD37 5005 aa3.77□□□□□ -1.81
PDCL3P4-201ENST00000489621 IGLV1-50A0A075B6I6 118 aa3.77□□□□□ -1.81
PDCL3P4-201ENST00000489621 IGLV5-48A0A075B6I7 105 aa3.77□□□□□ -1.81
PDCL3P4-201ENST00000489621 USP17L23D6RBM5 183 aa3.77□□□□□ -1.81
PDCL3P4-201ENST00000489621 KRTAP4-16G5E9R7 235 aaPredicted RBP3.77□□□□□ -1.81
PDCL3P4-201ENST00000489621 FAM236AA0A1B0GUQ0 79 aa3.76□□□□□ -1.81
PDCL3P4-201ENST00000489621 FAM236BA0A1B0GV22 79 aa3.76□□□□□ -1.81
PDCL3P4-201ENST00000489621 RPL37AP8A6NKH3 93 aa3.76□□□□□ -1.81
PDCL3P4-201ENST00000489621 COX7CP15954 63 aa3.76□□□□□ -1.81
PDCL3P4-201ENST00000489621 Q6ZRX8 168 aa3.76□□□□□ -1.81
PDCL3P4-201ENST00000489621 C7orf33Q8WU49 177 aa3.76□□□□□ -1.81
PDCL3P4-201ENST00000489621 DNAH10Q8IVF4 4471 aa3.75□□□□□ -1.81
PDCL3P4-201ENST00000489621 C16orf90A8MZG2 172 aa3.75□□□□□ -1.81
PDCL3P4-201ENST00000489621 H0Y9J4 135 aa3.75□□□□□ -1.81
PDCL3P4-201ENST00000489621 CRYGAP11844 174 aa3.75□□□□□ -1.81
PDCL3P4-201ENST00000489621 C3orf22Q8N5N4 141 aa3.75□□□□□ -1.81
PDCL3P4-201ENST00000489621 SERP2Q8N6R1 65 aa3.75□□□□□ -1.81
PDCL3P4-201ENST00000489621 APLNQ9ULZ1 77 aa3.75□□□□□ -1.81
PDCL3P4-201ENST00000489621 NUPR2A6NF83 97 aa3.74□□□□□ -1.81
PDCL3P4-201ENST00000489621 MRPL55Q7Z7F7 128 aaKnown RBP3.74□□□□□ -1.81
PDCL3P4-201ENST00000489621 LINC00474Q9P2X8 69 aa3.74□□□□□ -1.81
PDCL3P4-201ENST00000489621 ABCA13Q86UQ4 5058 aa3.73□□□□□ -1.81
PDCL3P4-201ENST00000489621 LY6G6CO95867 125 aa3.73□□□□□ -1.81
PDCL3P4-201ENST00000489621 Q6ZVQ6 151 aa3.73□□□□□ -1.81
PDCL3P4-201ENST00000489621 PKHD1P08F94 4074 aa3.73□□□□□ -1.81
PDCL3P4-201ENST00000489621 ETDCA0A1B0GVM5 59 aa3.72□□□□□ -1.81
PDCL3P4-201ENST00000489621 LINC01547P58512 204 aaPredicted RBP3.72□□□□□ -1.81
PDCL3P4-201ENST00000489621 SERTAD4-AS1Q5TG53 156 aa3.72□□□□□ -1.81
PDCL3P4-201ENST00000489621 Q8N377 158 aa3.72□□□□□ -1.81
PDCL3P4-201ENST00000489621 IGLV8-61A0A075B6I0 122 aa3.71□□□□□ -1.82
PDCL3P4-201ENST00000489621 EPM2AB3EWF7 344 aa3.71□□□□□ -1.82
PDCL3P4-201ENST00000489621 CCDC179H3BU77 68 aa3.71□□□□□ -1.82
PDCL3P4-201ENST00000489621 FUSP35637 526 aaKnown RBP eCLIP3.71□□□□□ -1.82
PDCL3P4-201ENST00000489621 REG3GQ6UW15 175 aa3.71□□□□□ -1.82
PDCL3P4-201ENST00000489621 C9orf163Q8N9P6 203 aa3.71□□□□□ -1.82
PDCL3P4-201ENST00000489621 SPRR4Q96PI1 79 aa3.71□□□□□ -1.82
PDCL3P4-201ENST00000489621 HERC1Q15751 4861 aa3.7□□□□□ -1.82
PDCL3P4-201ENST00000489621 IGKV3D-7A0A0C4DH55 119 aa3.7□□□□□ -1.82
PDCL3P4-201ENST00000489621 PSCAO43653 123 aa3.7□□□□□ -1.82
PDCL3P4-201ENST00000489621 ERC2-IT1O76042 136 aa3.7□□□□□ -1.82
PDCL3P4-201ENST00000489621 SPRR1BP22528 89 aa3.7□□□□□ -1.82
PDCL3P4-201ENST00000489621 RPS28P62857 69 aaKnown RBP3.7□□□□□ -1.82
PDCL3P4-201ENST00000489621 C9orf153Q5TBE3 101 aa3.7□□□□□ -1.82
PDCL3P4-201ENST00000489621 UBE2DNLQ8IWF7 75 aa3.7□□□□□ -1.82
PDCL3P4-201ENST00000489621 SVIPQ8NHG7 77 aa3.7□□□□□ -1.82
PDCL3P4-201ENST00000489621 TRAV7A0A075B6U4 112 aa3.69□□□□□ -1.82
PDCL3P4-201ENST00000489621 NBDYA0A0U1RRE5 68 aa3.69□□□□□ -1.82
PDCL3P4-201ENST00000489621 NREPQ16612 68 aa3.69□□□□□ -1.82
PDCL3P4-201ENST00000489621 LINC00336Q6ZUF6 198 aa3.69□□□□□ -1.82
PDCL3P4-201ENST00000489621 KRTAP7-1Q8IUC3 87 aa3.69□□□□□ -1.82
PDCL3P4-201ENST00000489621 Q9BRP9 147 aa3.69□□□□□ -1.82
PDCL3P4-201ENST00000489621 LRCOL1A6NCL2 159 aa3.68□□□□□ -1.82
PDCL3P4-201ENST00000489621 TMEM258P61165 79 aa3.68□□□□□ -1.82
PDCL3P4-201ENST00000489621 HAMPP81172 84 aa3.68□□□□□ -1.82
PDCL3P4-201ENST00000489621 Q8NBF4 154 aa3.68□□□□□ -1.82
PDCL3P4-201ENST00000489621 VPS13DQ5THJ4 4388 aa3.67□□□□□ -1.82
PDCL3P4-201ENST00000489621 NDUFC1O43677 76 aa3.67□□□□□ -1.82
PDCL3P4-201ENST00000489621 RPL37AP61513 92 aaKnown RBP3.67□□□□□ -1.82
PDCL3P4-201ENST00000489621 C1orf137Q5JT78 98 aa3.67□□□□□ -1.82
PDCL3P4-201ENST00000489621 FAM19A1Q7Z5A9 133 aa3.67□□□□□ -1.82
PDCL3P4-201ENST00000489621 DMBT1Q9UGM3 2413 aaPredicted RBP3.66□□□□□ -1.82
PDCL3P4-201ENST00000489621 DNAH6Q9C0G6 4158 aa3.66□□□□□ -1.82
PDCL3P4-201ENST00000489621 A0A096LNI7 61 aa3.66□□□□□ -1.82
PDCL3P4-201ENST00000489621 F8WEM9 126 aa3.66□□□□□ -1.82
PDCL3P4-201ENST00000489621 UBE2BP63146 152 aa3.66□□□□□ -1.82
PDCL3P4-201ENST00000489621 KLKP1Q107X0 134 aa3.66□□□□□ -1.82
PDCL3P4-201ENST00000489621 Q6ZRN7 208 aaPredicted RBP3.66□□□□□ -1.82
PDCL3P4-201ENST00000489621 SMIM29Q86T20 159 aa3.66□□□□□ -1.82
PDCL3P4-201ENST00000489621 FAT2Q9NYQ8 4349 aa3.65□□□□□ -1.82
PDCL3P4-201ENST00000489621 A0A087WVE0 104 aa3.65□□□□□ -1.83
PDCL3P4-201ENST00000489621 FAM168BA1KXE4 195 aa3.65□□□□□ -1.83
PDCL3P4-201ENST00000489621 M0R2N4 97 aa3.65□□□□□ -1.83
PDCL3P4-201ENST00000489621 BPY2O14599 106 aa3.65□□□□□ -1.83
PDCL3P4-201ENST00000489621 FAM19A5Q7Z5A7 132 aaPredicted RBP3.65□□□□□ -1.83
PDCL3P4-201ENST00000489621 A0A1W2PNM2 257 aa3.64□□□□□ -1.83
PDCL3P4-201ENST00000489621 A0A1W2PNN7 141 aa3.64□□□□□ -1.83
PDCL3P4-201ENST00000489621 DEFB105AQ8NG35 78 aa3.64□□□□□ -1.83
PDCL3P4-201ENST00000489621 DNAH2Q9P225 4427 aa3.64□□□□□ -1.83
PDCL3P4-201ENST00000489621 SRRM2Q9UQ35 2752 aaKnown RBP3.64□□□□□ -1.83
PDCL3P4-201ENST00000489621 UBR4Q5T4S7 5183 aa3.64□□□□□ -1.83
PDCL3P4-201ENST00000489621 HSPG2P98160 4391 aa3.63□□□□□ -1.83
PDCL3P4-201ENST00000489621 A0A1B0GVY2 172 aa3.63□□□□□ -1.83
PDCL3P4-201ENST00000489621 ATP5EP56381 51 aaPredicted RBP3.63□□□□□ -1.83
PDCL3P4-201ENST00000489621 KRTAP10-5P60370 271 aa3.63□□□□□ -1.83
PDCL3P4-201ENST00000489621 Q6ZR54 194 aa3.63□□□□□ -1.83
PDCL3P4-201ENST00000489621 SS18L2Q9UHA2 77 aa3.63□□□□□ -1.83
PDCL3P4-201ENST00000489621 DNAH17Q9UFH2 4485 aa3.62□□□□□ -1.83
PDCL3P4-201ENST00000489621 DNAH11Q96DT5 4516 aa3.62□□□□□ -1.83
PDCL3P4-201ENST00000489621 PKD1P98161 4303 aa3.62□□□□□ -1.83
PDCL3P4-201ENST00000489621 IGKV4-1P06312 121 aa3.62□□□□□ -1.83
PDCL3P4-201ENST00000489621 KRTAP13-1Q8IUC0 172 aa3.62□□□□□ -1.83
PDCL3P4-201ENST00000489621 A0A087WTM6 91 aa3.61□□□□□ -1.83
PDCL3P4-201ENST00000489621 J3KT08 172 aa3.61□□□□□ -1.83
PDCL3P4-201ENST00000489621 CDK2AP2O75956 126 aa3.61□□□□□ -1.83
PDCL3P4-201ENST00000489621 ST20-AS1Q8NBB2 130 aa3.61□□□□□ -1.83
PDCL3P4-201ENST00000489621 SPACA4Q8TDM5 124 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms