RNA–Protein interactions for RNA: ENST00000488994.5

PNCK-231, Transcript of pregnancy up-regulated nonubiquitous CaM kinase, human

TSL 2

Gene PNCK, Length 1,437 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNCK-231	ENST00000488994	SMR3B	P02814	79 aa	Predicted RBP	11.26	□□□□□ -0.61
PNCK-231	ENST00000488994	ST20-AS1	Q8NBB2	130 aa		11.26	□□□□□ -0.61
PNCK-231	ENST00000488994	RPL37A	P61513	92 aa	Known RBP	11.25	□□□□□ -0.61
PNCK-231	ENST00000488994		Q8N377	158 aa		11.25	□□□□□ -0.61
PNCK-231	ENST00000488994	LAMTOR3	Q9UHA4	124 aa		11.25	□□□□□ -0.61
PNCK-231	ENST00000488994	LINC01547	P58512	204 aa	Predicted RBP	11.24	□□□□□ -0.61
PNCK-231	ENST00000488994	SPRR1B	P22528	89 aa		11.23	□□□□□ -0.61
PNCK-231	ENST00000488994	MYCBP2	O75592	4640 aa		11.22	□□□□□ -0.61
PNCK-231	ENST00000488994	FAM229A	H3BQW9	127 aa		11.22	□□□□□ -0.61
PNCK-231	ENST00000488994	NDUFV3	P56181	108 aa	Known RBP	11.22	□□□□□ -0.61
PNCK-231	ENST00000488994	OBSCN-AS1	Q96MR7	158 aa		11.2	□□□□□ -0.62
PNCK-231	ENST00000488994	GAGE2A	Q6NT46	116 aa		11.19	□□□□□ -0.62
PNCK-231	ENST00000488994	SPRR4	Q96PI1	79 aa		11.19	□□□□□ -0.62
PNCK-231	ENST00000488994	RBM3	P98179	157 aa	Known RBP	11.18	□□□□□ -0.62
PNCK-231	ENST00000488994		F8WEM9	126 aa		11.17	□□□□□ -0.62
PNCK-231	ENST00000488994	KRTAP10-4	P60372	401 aa	Predicted RBP	11.17	□□□□□ -0.62
PNCK-231	ENST00000488994	LINC00483	Q53H64	154 aa		11.17	□□□□□ -0.62
PNCK-231	ENST00000488994	HERC1	Q15751	4861 aa		11.16	□□□□□ -0.62
PNCK-231	ENST00000488994	C21orf62-AS1	Q17RA5	79 aa		11.16	□□□□□ -0.62
PNCK-231	ENST00000488994		J3QR89	54 aa		11.15	□□□□□ -0.62
PNCK-231	ENST00000488994	PLA2G1B	P04054	148 aa	Known RBP	11.15	□□□□□ -0.62
PNCK-231	ENST00000488994	PDE6G	P18545	87 aa		11.15	□□□□□ -0.62
PNCK-231	ENST00000488994	SPINK6	Q6UWN8	80 aa		11.15	□□□□□ -0.62
PNCK-231	ENST00000488994	DSCR8	Q96T75	97 aa		11.15	□□□□□ -0.62
PNCK-231	ENST00000488994	SMIM29	Q86T20	159 aa		11.14	□□□□□ -0.63
PNCK-231	ENST00000488994	C3orf22	Q8N5N4	141 aa		11.1	□□□□□ -0.63
PNCK-231	ENST00000488994	C14orf132	Q9NPU4	83 aa		11.1	□□□□□ -0.63
PNCK-231	ENST00000488994	LOC110117498	A0A087WWA1	95 aa		11.09	□□□□□ -0.63
PNCK-231	ENST00000488994		K7ERU9	68 aa		11.09	□□□□□ -0.63
PNCK-231	ENST00000488994	IGLV8-61	A0A075B6I0	122 aa		11.09	□□□□□ -0.63
PNCK-231	ENST00000488994		A0A1B0GV72	72 aa		11.08	□□□□□ -0.64
PNCK-231	ENST00000488994	TRBV7-4	A0A0J9YYF1	115 aa		11.07	□□□□□ -0.64
PNCK-231	ENST00000488994	FAM229B	Q4G0N7	80 aa		11.07	□□□□□ -0.64
PNCK-231	ENST00000488994		Q6JHZ5	121 aa		11.07	□□□□□ -0.64
PNCK-231	ENST00000488994	CCK	P06307	115 aa		11.04	□□□□□ -0.64
PNCK-231	ENST00000488994		Q6ZQT0	140 aa		11.04	□□□□□ -0.64
PNCK-231	ENST00000488994	KRTAP29-1	A8MX34	341 aa	Predicted RBP	11.03	□□□□□ -0.64
PNCK-231	ENST00000488994	ACYP1	P07311	99 aa		11.02	□□□□□ -0.64
PNCK-231	ENST00000488994	IGLV9-49	A0A0B4J1Y8	123 aa		11.01	□□□□□ -0.65
PNCK-231	ENST00000488994	FAM240A	A0A1B0GVK7	77 aa		11.01	□□□□□ -0.65
PNCK-231	ENST00000488994	C9orf153	Q5TBE3	101 aa		11.01	□□□□□ -0.65
PNCK-231	ENST00000488994		A0A1B0GW54	56 aa		11	□□□□□ -0.65
PNCK-231	ENST00000488994		Q8NBF4	154 aa		11	□□□□□ -0.65
PNCK-231	ENST00000488994	ANAPC11	Q9NYG5	84 aa		11	□□□□□ -0.65
PNCK-231	ENST00000488994	CRYGA	P11844	174 aa		10.99	□□□□□ -0.65
PNCK-231	ENST00000488994	KRTAP1-4	P0C5Y4	121 aa		10.98	□□□□□ -0.65
PNCK-231	ENST00000488994	IGFL1	Q6UW32	110 aa		10.98	□□□□□ -0.65
PNCK-231	ENST00000488994	SSBP3-AS1	Q7Z2R9	100 aa		10.98	□□□□□ -0.65
PNCK-231	ENST00000488994	MOBP	Q13875	183 aa		10.96	□□□□□ -0.65
PNCK-231	ENST00000488994	VPS25	Q9BRG1	176 aa		10.95	□□□□□ -0.66
PNCK-231	ENST00000488994	LRP1	Q07954	4544 aa	Known RBP	10.94	□□□□□ -0.66
PNCK-231	ENST00000488994		J3QL48	77 aa		10.94	□□□□□ -0.66
PNCK-231	ENST00000488994	OXT	P01178	125 aa		10.93	□□□□□ -0.66
PNCK-231	ENST00000488994		Q6Q795	121 aa		10.92	□□□□□ -0.66
PNCK-231	ENST00000488994	PKHD1L1	Q86WI1	4243 aa		10.92	□□□□□ -0.66
PNCK-231	ENST00000488994		A0A1W2PNM2	257 aa		10.92	□□□□□ -0.66
PNCK-231	ENST00000488994		A0A087X002	238 aa		10.91	□□□□□ -0.66
PNCK-231	ENST00000488994	CD164	Q04900	197 aa		10.87	□□□□□ -0.67
PNCK-231	ENST00000488994	KRTAP13-2	Q52LG2	175 aa		10.87	□□□□□ -0.67
PNCK-231	ENST00000488994	FAT3	Q8TDW7	4589 aa		10.87	□□□□□ -0.67
PNCK-231	ENST00000488994	TYMSOS	Q8TAI1	123 aa		10.86	□□□□□ -0.67
PNCK-231	ENST00000488994	UBL5	Q9BZL1	73 aa		10.85	□□□□□ -0.67
PNCK-231	ENST00000488994		A0A0G2JQZ4	141 aa		10.84	□□□□□ -0.67
PNCK-231	ENST00000488994	LINC00846	Q9NV44	126 aa		10.84	□□□□□ -0.67
PNCK-231	ENST00000488994	TRBV7-7	A0A0K0K1E9	115 aa		10.82	□□□□□ -0.68
PNCK-231	ENST00000488994	PRR26	Q8N8Z3	221 aa		10.82	□□□□□ -0.68
PNCK-231	ENST00000488994	C4orf48	Q5BLP8	95 aa		10.81	□□□□□ -0.68
PNCK-231	ENST00000488994	NREP	Q16612	68 aa		10.8	□□□□□ -0.68
PNCK-231	ENST00000488994		A0A087WSZ3	146 aa		10.79	□□□□□ -0.68
PNCK-231	ENST00000488994	CDIP1	Q9H305	208 aa		10.79	□□□□□ -0.68
PNCK-231	ENST00000488994	SS18L2	Q9UHA2	77 aa		10.79	□□□□□ -0.68
PNCK-231	ENST00000488994	SPAG11A	Q6PDA7	123 aa		10.78	□□□□□ -0.68
PNCK-231	ENST00000488994	LINC00643	Q86TS7	51 aa		10.78	□□□□□ -0.68
PNCK-231	ENST00000488994	MT1HL1	P0DM35	61 aa		10.76	□□□□□ -0.69
PNCK-231	ENST00000488994	HRCT1	Q6UXD1	115 aa		10.76	□□□□□ -0.69
PNCK-231	ENST00000488994		Q6ZVQ6	151 aa		10.76	□□□□□ -0.69
PNCK-231	ENST00000488994	SPINK1	P00995	79 aa		10.75	□□□□□ -0.69
PNCK-231	ENST00000488994	LINC00304	Q8N9R0	145 aa		10.73	□□□□□ -0.69
PNCK-231	ENST00000488994	HMCN2	Q8NDA2	5059 aa		10.72	□□□□□ -0.69
PNCK-231	ENST00000488994	ATP5EP2	Q5VTU8	51 aa		10.72	□□□□□ -0.69
PNCK-231	ENST00000488994		Q5XG85	94 aa		10.72	□□□□□ -0.69
PNCK-231	ENST00000488994	LIMD2	Q9BT23	127 aa		10.72	□□□□□ -0.69
PNCK-231	ENST00000488994	RPS29	P62273	56 aa	Known RBP	10.71	□□□□□ -0.69
PNCK-231	ENST00000488994	KRTAP10-8	P60410	259 aa		10.68	□□□□□ -0.7
PNCK-231	ENST00000488994	ASB16-AS1	Q495Z4	193 aa		10.68	□□□□□ -0.7
PNCK-231	ENST00000488994	TNXB	P22105	4242 aa		10.68	□□□□□ -0.7
PNCK-231	ENST00000488994	CXCL6	P80162	114 aa		10.67	□□□□□ -0.7
PNCK-231	ENST00000488994	BPY2	O14599	106 aa		10.67	□□□□□ -0.7
PNCK-231	ENST00000488994	SIGMAR1	Q99720	223 aa		10.66	□□□□□ -0.7
PNCK-231	ENST00000488994		J3KT08	172 aa		10.65	□□□□□ -0.7
PNCK-231	ENST00000488994	LINC00472	Q9H8W2	130 aa		10.65	□□□□□ -0.7
PNCK-231	ENST00000488994	IMUP	Q9GZP8	106 aa		10.61	□□□□□ -0.71
PNCK-231	ENST00000488994	IGKV3D-7	A0A0C4DH55	119 aa		10.6	□□□□□ -0.71
PNCK-231	ENST00000488994	MT-ATP8	P03928	68 aa		10.59	□□□□□ -0.71
PNCK-231	ENST00000488994		Q96NJ1	140 aa		10.58	□□□□□ -0.72
PNCK-231	ENST00000488994	IGKV4-1	P06312	121 aa		10.56	□□□□□ -0.72
PNCK-231	ENST00000488994	DEFB116	Q30KQ4	102 aa		10.55	□□□□□ -0.72
PNCK-231	ENST00000488994	UBR4	Q5T4S7	5183 aa		10.54	□□□□□ -0.72
PNCK-231	ENST00000488994	NDUFB1	O75438	58 aa		10.54	□□□□□ -0.72
PNCK-231	ENST00000488994		A8MWP4	228 aa		10.53	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms