RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 PSORS1C2Q9UIG4 136 aa12.4□□□□□ -0.42
ATP1A1-208ENST00000488733 RYR3Q15413 4870 aa12.39□□□□□ -0.43
ATP1A1-208ENST00000488733 TRBV7-7A0A0K0K1E9 115 aa12.39□□□□□ -0.43
ATP1A1-208ENST00000488733 IMUPQ9GZP8 106 aa12.39□□□□□ -0.43
ATP1A1-208ENST00000488733 FAM30AQ9NZY2 134 aa12.39□□□□□ -0.43
ATP1A1-208ENST00000488733 Q6JHZ5 121 aa12.38□□□□□ -0.43
ATP1A1-208ENST00000488733 Q6ZSA8 131 aa12.38□□□□□ -0.43
ATP1A1-208ENST00000488733 DNAH8Q96JB1 4490 aa12.37□□□□□ -0.43
ATP1A1-208ENST00000488733 A0A1B0GW54 56 aa12.37□□□□□ -0.43
ATP1A1-208ENST00000488733 C1orf137Q5JT78 98 aa12.37□□□□□ -0.43
ATP1A1-208ENST00000488733 CIRBP-AS1Q8TBR5 109 aa12.36□□□□□ -0.43
ATP1A1-208ENST00000488733 PKHD1P08F94 4074 aa12.35□□□□□ -0.43
ATP1A1-208ENST00000488733 PCP4P48539 62 aa12.34□□□□□ -0.43
ATP1A1-208ENST00000488733 IGLV8-61A0A075B6I0 122 aa12.34□□□□□ -0.43
ATP1A1-208ENST00000488733 ATP5EP2Q5VTU8 51 aa12.33□□□□□ -0.44
ATP1A1-208ENST00000488733 ZNF861PO60384 105 aa12.32□□□□□ -0.44
ATP1A1-208ENST00000488733 SCXQ7RTU7 201 aa12.31□□□□□ -0.44
ATP1A1-208ENST00000488733 ZNF706Q9Y5V0 76 aaPredicted RBP12.31□□□□□ -0.44
ATP1A1-208ENST00000488733 Q6ZVQ6 151 aa12.3□□□□□ -0.44
ATP1A1-208ENST00000488733 Q8NBF4 154 aa12.29□□□□□ -0.44
ATP1A1-208ENST00000488733 LRP1BQ9NZR2 4599 aa12.29□□□□□ -0.44
ATP1A1-208ENST00000488733 A0A1W2PNM2 257 aa12.28□□□□□ -0.44
ATP1A1-208ENST00000488733 SPRR4Q96PI1 79 aa12.28□□□□□ -0.44
ATP1A1-208ENST00000488733 DYNC1H1Q14204 4646 aaKnown RBP12.27□□□□□ -0.44
ATP1A1-208ENST00000488733 IGKV3D-7A0A0C4DH55 119 aa12.27□□□□□ -0.45
ATP1A1-208ENST00000488733 IGLV7-43P04211 117 aa12.27□□□□□ -0.45
ATP1A1-208ENST00000488733 HAMPP81172 84 aa12.27□□□□□ -0.45
ATP1A1-208ENST00000488733 LINC00483Q53H64 154 aa12.25□□□□□ -0.45
ATP1A1-208ENST00000488733 IGFL1Q6UW32 110 aa12.25□□□□□ -0.45
ATP1A1-208ENST00000488733 CRYGAP11844 174 aa12.23□□□□□ -0.45
ATP1A1-208ENST00000488733 NREPQ16612 68 aa12.23□□□□□ -0.45
ATP1A1-208ENST00000488733 CXCL6P80162 114 aa12.21□□□□□ -0.45
ATP1A1-208ENST00000488733 RPL37AP61513 92 aaKnown RBP12.17□□□□□ -0.46
ATP1A1-208ENST00000488733 SRRM2Q9UQ35 2752 aaKnown RBP12.16□□□□□ -0.46
ATP1A1-208ENST00000488733 HIST1H4AP62805 103 aaKnown RBP12.15□□□□□ -0.46
ATP1A1-208ENST00000488733 A0A0G2JQZ4 141 aa12.14□□□□□ -0.47
ATP1A1-208ENST00000488733 FAM236AA0A1B0GUQ0 79 aa12.14□□□□□ -0.47
ATP1A1-208ENST00000488733 FAM236BA0A1B0GV22 79 aa12.14□□□□□ -0.47
ATP1A1-208ENST00000488733 APOBP04114 4563 aaKnown RBP12.12□□□□□ -0.47
ATP1A1-208ENST00000488733 IGLV9-49A0A0B4J1Y8 123 aa12.11□□□□□ -0.47
ATP1A1-208ENST00000488733 C9orf153Q5TBE3 101 aa12.11□□□□□ -0.47
ATP1A1-208ENST00000488733 BPY2O14599 106 aa12.1□□□□□ -0.47
ATP1A1-208ENST00000488733 ANAPC13Q9BS18 74 aa12.1□□□□□ -0.47
ATP1A1-208ENST00000488733 A0A087WVE0 104 aa12.08□□□□□ -0.48
ATP1A1-208ENST00000488733 A0A087WSZ3 146 aa12.07□□□□□ -0.48
ATP1A1-208ENST00000488733 ANAPC11Q9NYG5 84 aa12.04□□□□□ -0.48
ATP1A1-208ENST00000488733 MOBPQ13875 183 aa12.03□□□□□ -0.48
ATP1A1-208ENST00000488733 ATOX1O00244 68 aa12.02□□□□□ -0.49
ATP1A1-208ENST00000488733 SMR3BP02814 79 aaPredicted RBP12.01□□□□□ -0.49
ATP1A1-208ENST00000488733 FAM229BQ4G0N7 80 aa11.97□□□□□ -0.49
ATP1A1-208ENST00000488733 SSBP3-AS1Q7Z2R9 100 aa11.97□□□□□ -0.49
ATP1A1-208ENST00000488733 VPS13BQ7Z7G8 4022 aa11.97□□□□□ -0.49
ATP1A1-208ENST00000488733 IGKV4-1P06312 121 aa11.97□□□□□ -0.49
ATP1A1-208ENST00000488733 CDK2AP2O75956 126 aa11.96□□□□□ -0.49
ATP1A1-208ENST00000488733 FAT1Q14517 4588 aa11.95□□□□□ -0.5
ATP1A1-208ENST00000488733 EPPK1P58107 5090 aaKnown RBP11.95□□□□□ -0.5
ATP1A1-208ENST00000488733 SS18L2Q9UHA2 77 aa11.94□□□□□ -0.5
ATP1A1-208ENST00000488733 DSCR10P59022 87 aa11.94□□□□□ -0.5
ATP1A1-208ENST00000488733 Q8N9L7 120 aa11.94□□□□□ -0.5
ATP1A1-208ENST00000488733 CD164Q04900 197 aa11.91□□□□□ -0.5
ATP1A1-208ENST00000488733 SPINK6Q6UWN8 80 aa11.91□□□□□ -0.5
ATP1A1-208ENST00000488733 LINC00472Q9H8W2 130 aa11.91□□□□□ -0.5
ATP1A1-208ENST00000488733 HRCT1Q6UXD1 115 aa11.9□□□□□ -0.5
ATP1A1-208ENST00000488733 HSPG2P98160 4391 aa11.89□□□□□ -0.51
ATP1A1-208ENST00000488733 J3KT08 172 aa11.89□□□□□ -0.51
ATP1A1-208ENST00000488733 DEFB116Q30KQ4 102 aa11.88□□□□□ -0.51
ATP1A1-208ENST00000488733 KRTAP1-4P0C5Y4 121 aa11.87□□□□□ -0.51
ATP1A1-208ENST00000488733 A0A087X002 238 aa11.86□□□□□ -0.51
ATP1A1-208ENST00000488733 K7EQZ3 153 aa11.86□□□□□ -0.51
ATP1A1-208ENST00000488733 KRTAP10-4P60372 401 aaPredicted RBP11.86□□□□□ -0.51
ATP1A1-208ENST00000488733 SMIM20Q8N5G0 67 aa11.86□□□□□ -0.51
ATP1A1-208ENST00000488733 SERP2Q8N6R1 65 aa11.86□□□□□ -0.51
ATP1A1-208ENST00000488733 RYR1P21817 5038 aa11.86□□□□□ -0.51
ATP1A1-208ENST00000488733 COX7CP15954 63 aa11.84□□□□□ -0.51
ATP1A1-208ENST00000488733 KRTAP13-2Q52LG2 175 aa11.84□□□□□ -0.51
ATP1A1-208ENST00000488733 FAM229AH3BQW9 127 aa11.83□□□□□ -0.52
ATP1A1-208ENST00000488733 UQCRQO14949 82 aa11.83□□□□□ -0.52
ATP1A1-208ENST00000488733 PLA2G1BP04054 148 aaKnown RBP11.83□□□□□ -0.52
ATP1A1-208ENST00000488733 KIAA1109Q2LD37 5005 aa11.82□□□□□ -0.52
ATP1A1-208ENST00000488733 A8MWP4 228 aa11.82□□□□□ -0.52
ATP1A1-208ENST00000488733 CCDC179H3BU77 68 aa11.8□□□□□ -0.52
ATP1A1-208ENST00000488733 Q96NJ1 140 aa11.8□□□□□ -0.52
ATP1A1-208ENST00000488733 TRAV7A0A075B6U4 112 aa11.79□□□□□ -0.52
ATP1A1-208ENST00000488733 PRR15Q8IV56 129 aa11.79□□□□□ -0.52
ATP1A1-208ENST00000488733 NDUFB1O75438 58 aa11.77□□□□□ -0.52
ATP1A1-208ENST00000488733 Q5VSD8 79 aa11.77□□□□□ -0.52
ATP1A1-208ENST00000488733 HCG22E2RYF7 251 aa11.77□□□□□ -0.53
ATP1A1-208ENST00000488733 ASB16-AS1Q495Z4 193 aa11.75□□□□□ -0.53
ATP1A1-208ENST00000488733 TYMSOSQ8TAI1 123 aa11.74□□□□□ -0.53
ATP1A1-208ENST00000488733 Q5XG85 94 aa11.72□□□□□ -0.53
ATP1A1-208ENST00000488733 C4orf48Q5BLP8 95 aa11.69□□□□□ -0.54
ATP1A1-208ENST00000488733 Q8N1X5 172 aa11.69□□□□□ -0.54
ATP1A1-208ENST00000488733 KRTAP17-1Q9BYP8 105 aa11.69□□□□□ -0.54
ATP1A1-208ENST00000488733 OCR1Q9BZK8 76 aa11.68□□□□□ -0.54
ATP1A1-208ENST00000488733 LIMD2Q9BT23 127 aa11.67□□□□□ -0.54
ATP1A1-208ENST00000488733 KRTAP29-1A8MX34 341 aaPredicted RBP11.66□□□□□ -0.54
ATP1A1-208ENST00000488733 CASC2Q6XLA1 102 aa11.66□□□□□ -0.54
ATP1A1-208ENST00000488733 A0A1B0GVX0 72 aa11.65□□□□□ -0.54
ATP1A1-208ENST00000488733 SPINK1P00995 79 aa11.65□□□□□ -0.54
ATP1A1-208ENST00000488733 WFDC13Q8IUB5 93 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms