RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 K7ERU9 68 aa4.21□□□□□ -1.74
PDAP1-203ENST00000488214 SMR3BP02814 79 aaPredicted RBP4.21□□□□□ -1.74
PDAP1-203ENST00000488214 XGP55808 180 aa4.21□□□□□ -1.74
PDAP1-203ENST00000488214 OBSCN-AS1Q96MR7 158 aa4.21□□□□□ -1.74
PDAP1-203ENST00000488214 RBM3P98179 157 aaKnown RBP4.2□□□□□ -1.74
PDAP1-203ENST00000488214 SPRR4Q96PI1 79 aa4.2□□□□□ -1.74
PDAP1-203ENST00000488214 DSCR8Q96T75 97 aa4.19□□□□□ -1.74
PDAP1-203ENST00000488214 VPS25Q9BRG1 176 aa4.19□□□□□ -1.74
PDAP1-203ENST00000488214 EPPK1P58107 5090 aaKnown RBP4.19□□□□□ -1.74
PDAP1-203ENST00000488214 SPRR1BP22528 89 aa4.18□□□□□ -1.74
PDAP1-203ENST00000488214 C9orf153Q5TBE3 101 aa4.18□□□□□ -1.74
PDAP1-203ENST00000488214 SMIM29Q86T20 159 aa4.18□□□□□ -1.74
PDAP1-203ENST00000488214 LOC110117498A0A087WWA1 95 aa4.17□□□□□ -1.74
PDAP1-203ENST00000488214 IGLV9-49A0A0B4J1Y8 123 aa4.17□□□□□ -1.74
PDAP1-203ENST00000488214 TRBV7-4A0A0J9YYF1 115 aa4.17□□□□□ -1.74
PDAP1-203ENST00000488214 FAM229AH3BQW9 127 aa4.17□□□□□ -1.74
PDAP1-203ENST00000488214 LINC00483Q53H64 154 aa4.17□□□□□ -1.74
PDAP1-203ENST00000488214 Q6ZQT0 140 aa4.17□□□□□ -1.74
PDAP1-203ENST00000488214 FAT1Q14517 4588 aa4.17□□□□□ -1.74
PDAP1-203ENST00000488214 VPS13BQ7Z7G8 4022 aa4.17□□□□□ -1.74
PDAP1-203ENST00000488214 RYR1P21817 5038 aa4.16□□□□□ -1.74
PDAP1-203ENST00000488214 HSPG2P98160 4391 aa4.16□□□□□ -1.74
PDAP1-203ENST00000488214 CDK2AP2O75956 126 aa4.16□□□□□ -1.74
PDAP1-203ENST00000488214 ANAPC11Q9NYG5 84 aa4.16□□□□□ -1.74
PDAP1-203ENST00000488214 FAM240AA0A1B0GVK7 77 aa4.15□□□□□ -1.75
PDAP1-203ENST00000488214 CCKP06307 115 aa4.15□□□□□ -1.75
PDAP1-203ENST00000488214 PDE6GP18545 87 aa4.15□□□□□ -1.75
PDAP1-203ENST00000488214 MOBPQ13875 183 aa4.15□□□□□ -1.75
PDAP1-203ENST00000488214 LCE2CQ5TA81 110 aa4.15□□□□□ -1.75
PDAP1-203ENST00000488214 IGFL1Q6UW32 110 aa4.15□□□□□ -1.75
PDAP1-203ENST00000488214 SRRM2Q9UQ35 2752 aaKnown RBP4.14□□□□□ -1.75
PDAP1-203ENST00000488214 PKHD1L1Q86WI1 4243 aa4.14□□□□□ -1.75
PDAP1-203ENST00000488214 A0A0G2JQZ4 141 aa4.14□□□□□ -1.75
PDAP1-203ENST00000488214 Q5VSD8 79 aa4.14□□□□□ -1.75
PDAP1-203ENST00000488214 Q8NBF4 154 aa4.14□□□□□ -1.75
PDAP1-203ENST00000488214 KIAA1109Q2LD37 5005 aa4.13□□□□□ -1.75
PDAP1-203ENST00000488214 IGLV8-61A0A075B6I0 122 aa4.13□□□□□ -1.75
PDAP1-203ENST00000488214 PLA2G1BP04054 148 aaKnown RBP4.13□□□□□ -1.75
PDAP1-203ENST00000488214 ACYP1P07311 99 aa4.13□□□□□ -1.75
PDAP1-203ENST00000488214 KRTAP10-4P60372 401 aaPredicted RBP4.13□□□□□ -1.75
PDAP1-203ENST00000488214 Q6JHZ5 121 aa4.13□□□□□ -1.75
PDAP1-203ENST00000488214 SPINK6Q6UWN8 80 aa4.13□□□□□ -1.75
PDAP1-203ENST00000488214 A0A1W2PNM2 257 aa4.12□□□□□ -1.75
PDAP1-203ENST00000488214 CDIP1Q9H305 208 aa4.12□□□□□ -1.75
PDAP1-203ENST00000488214 A0A087X002 238 aa4.11□□□□□ -1.75
PDAP1-203ENST00000488214 KRTAP1-4P0C5Y4 121 aa4.11□□□□□ -1.75
PDAP1-203ENST00000488214 FAM229BQ4G0N7 80 aa4.11□□□□□ -1.75
PDAP1-203ENST00000488214 LINC00846Q9NV44 126 aa4.11□□□□□ -1.75
PDAP1-203ENST00000488214 HRCT1Q6UXD1 115 aa4.1□□□□□ -1.75
PDAP1-203ENST00000488214 A0A087WSZ3 146 aa4.09□□□□□ -1.75
PDAP1-203ENST00000488214 CRYGAP11844 174 aa4.09□□□□□ -1.75
PDAP1-203ENST00000488214 KRTAP13-2Q52LG2 175 aa4.09□□□□□ -1.75
PDAP1-203ENST00000488214 UBL5Q9BZL1 73 aa4.09□□□□□ -1.75
PDAP1-203ENST00000488214 LCE2AQ5TA79 106 aaPredicted RBP4.08□□□□□ -1.76
PDAP1-203ENST00000488214 TRBV7-7A0A0K0K1E9 115 aa4.07□□□□□ -1.76
PDAP1-203ENST00000488214 MT-ATP8P03928 68 aa4.07□□□□□ -1.76
PDAP1-203ENST00000488214 Q6Q795 121 aa4.07□□□□□ -1.76
PDAP1-203ENST00000488214 Q6ZVQ6 151 aa4.07□□□□□ -1.76
PDAP1-203ENST00000488214 Q8N1X5 172 aa4.07□□□□□ -1.76
PDAP1-203ENST00000488214 PRR26Q8N8Z3 221 aa4.07□□□□□ -1.76
PDAP1-203ENST00000488214 BIRC6Q9NR09 4857 aa4.06□□□□□ -1.76
PDAP1-203ENST00000488214 IGKV3D-7A0A0C4DH55 119 aa4.06□□□□□ -1.76
PDAP1-203ENST00000488214 A0A1B0GW54 56 aa4.06□□□□□ -1.76
PDAP1-203ENST00000488214 NREPQ16612 68 aa4.06□□□□□ -1.76
PDAP1-203ENST00000488214 ATP5EP2Q5VTU8 51 aa4.06□□□□□ -1.76
PDAP1-203ENST00000488214 SSBP3-AS1Q7Z2R9 100 aa4.06□□□□□ -1.76
PDAP1-203ENST00000488214 LINC00643Q86TS7 51 aa4.06□□□□□ -1.76
PDAP1-203ENST00000488214 TYMSOSQ8TAI1 123 aa4.06□□□□□ -1.76
PDAP1-203ENST00000488214 KRTAP17-1Q9BYP8 105 aa4.05□□□□□ -1.76
PDAP1-203ENST00000488214 SS18L2Q9UHA2 77 aa4.05□□□□□ -1.76
PDAP1-203ENST00000488214 SIGMAR1Q99720 223 aa4.04□□□□□ -1.76
PDAP1-203ENST00000488214 CD164Q04900 197 aa4.03□□□□□ -1.76
PDAP1-203ENST00000488214 LINC00304Q8N9R0 145 aa4.03□□□□□ -1.76
PDAP1-203ENST00000488214 BPY2O14599 106 aa4.02□□□□□ -1.77
PDAP1-203ENST00000488214 LORP23490 312 aaPredicted RBP4.02□□□□□ -1.77
PDAP1-203ENST00000488214 DEFB116Q30KQ4 102 aa4.02□□□□□ -1.77
PDAP1-203ENST00000488214 FAT3Q8TDW7 4589 aa4.02□□□□□ -1.77
PDAP1-203ENST00000488214 H3BS24 57 aa4.01□□□□□ -1.77
PDAP1-203ENST00000488214 HIST1H4AP62805 103 aaKnown RBP4.01□□□□□ -1.77
PDAP1-203ENST00000488214 CXCL6P80162 114 aa4.01□□□□□ -1.77
PDAP1-203ENST00000488214 LIMD2Q9BT23 127 aa4.01□□□□□ -1.77
PDAP1-203ENST00000488214 Q8N9L7 120 aa4□□□□□ -1.77
PDAP1-203ENST00000488214 HERC2O95714 4834 aa3.99□□□□□ -1.77
PDAP1-203ENST00000488214 LRP1Q07954 4544 aaKnown RBP3.99□□□□□ -1.77
PDAP1-203ENST00000488214 A0A087WVE0 104 aa3.99□□□□□ -1.77
PDAP1-203ENST00000488214 Q96NJ1 140 aa3.99□□□□□ -1.77
PDAP1-203ENST00000488214 LINC00472Q9H8W2 130 aa3.99□□□□□ -1.77
PDAP1-203ENST00000488214 FLG2Q5D862 2391 aaPredicted RBP3.99□□□□□ -1.77
PDAP1-203ENST00000488214 K7EQZ3 153 aa3.98□□□□□ -1.77
PDAP1-203ENST00000488214 SPINK1P00995 79 aa3.98□□□□□ -1.77
PDAP1-203ENST00000488214 IGKV4-1P06312 121 aa3.98□□□□□ -1.77
PDAP1-203ENST00000488214 DSCR10P59022 87 aa3.98□□□□□ -1.77
PDAP1-203ENST00000488214 SPAG11AQ6PDA7 123 aa3.98□□□□□ -1.77
PDAP1-203ENST00000488214 TNXBP22105 4242 aa3.98□□□□□ -1.77
PDAP1-203ENST00000488214 FAM236AA0A1B0GUQ0 79 aa3.97□□□□□ -1.77
PDAP1-203ENST00000488214 FAM236BA0A1B0GV22 79 aa3.97□□□□□ -1.77
PDAP1-203ENST00000488214 J3KT08 172 aa3.97□□□□□ -1.77
PDAP1-203ENST00000488214 KRTAP4-5Q9BYR2 181 aa3.97□□□□□ -1.77
PDAP1-203ENST00000488214 IMUPQ9GZP8 106 aa3.97□□□□□ -1.77
PDAP1-203ENST00000488214 ABCA13Q86UQ4 5058 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms