RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 MED13LQ71F56 2210 aa1.87□□□□□ -2.11
ECHDC1-217ENST00000488087 TRIOO75962 3097 aa1.87□□□□□ -2.11
ECHDC1-217ENST00000488087 SPTBN1Q01082 2364 aaKnown RBP1.86□□□□□ -2.11
ECHDC1-217ENST00000488087 VCANP13611 3396 aa1.86□□□□□ -2.11
ECHDC1-217ENST00000488087 LAMA1P25391 3075 aa1.86□□□□□ -2.11
ECHDC1-217ENST00000488087 HIVEP2P31629 2446 aa1.86□□□□□ -2.11
ECHDC1-217ENST00000488087 RPL37AP61513 92 aaKnown RBP1.86□□□□□ -2.11
ECHDC1-217ENST00000488087 KRTAP26-1Q6PEX3 210 aa1.86□□□□□ -2.11
ECHDC1-217ENST00000488087 DEFB105AQ8NG35 78 aa1.86□□□□□ -2.11
ECHDC1-217ENST00000488087 TECTAO75443 2155 aa1.86□□□□□ -2.11
ECHDC1-217ENST00000488087 DMDP11532 3685 aa1.85□□□□□ -2.11
ECHDC1-217ENST00000488087 P0C880 135 aa1.85□□□□□ -2.11
ECHDC1-217ENST00000488087 FREM2Q5SZK8 3169 aa1.85□□□□□ -2.11
ECHDC1-217ENST00000488087 SPTBN2O15020 2390 aa1.85□□□□□ -2.11
ECHDC1-217ENST00000488087 WNK1Q9H4A3 2382 aa1.85□□□□□ -2.11
ECHDC1-217ENST00000488087 PRUNE2Q8WUY3 3088 aa1.85□□□□□ -2.11
ECHDC1-217ENST00000488087 KMT2BQ9UMN6 2715 aaPredicted RBP1.84□□□□□ -2.11
ECHDC1-217ENST00000488087 WDFY4Q6ZS81 3184 aa1.84□□□□□ -2.11
ECHDC1-217ENST00000488087 A0A1B0GU33 70 aa1.84□□□□□ -2.11
ECHDC1-217ENST00000488087 A0A1W2PNN7 141 aa1.84□□□□□ -2.11
ECHDC1-217ENST00000488087 PCOTHQ58A44 107 aa1.84□□□□□ -2.11
ECHDC1-217ENST00000488087 C10orf99Q6UWK7 81 aa1.84□□□□□ -2.11
ECHDC1-217ENST00000488087 PIEZO2Q9H5I5 2752 aa1.84□□□□□ -2.12
ECHDC1-217ENST00000488087 AKAP13Q12802 2813 aa1.83□□□□□ -2.12
ECHDC1-217ENST00000488087 H3BNG1 76 aa1.83□□□□□ -2.12
ECHDC1-217ENST00000488087 MRPL34Q9BQ48 92 aaKnown RBP1.83□□□□□ -2.12
ECHDC1-217ENST00000488087 SPENQ96T58 3664 aaKnown RBP1.83□□□□□ -2.12
ECHDC1-217ENST00000488087 DSPP15924 2871 aaKnown RBP1.83□□□□□ -2.12
ECHDC1-217ENST00000488087 PKDREJQ9NTG1 2253 aa1.83□□□□□ -2.12
ECHDC1-217ENST00000488087 SORL1Q92673 2214 aa1.82□□□□□ -2.12
ECHDC1-217ENST00000488087 CDH23Q9H251 3354 aa1.82□□□□□ -2.12
ECHDC1-217ENST00000488087 NUPR2A6NF83 97 aa1.82□□□□□ -2.12
ECHDC1-217ENST00000488087 MAP1BP46821 2468 aaKnown RBP1.81□□□□□ -2.12
ECHDC1-217ENST00000488087 DCHS1Q96JQ0 3298 aa1.81□□□□□ -2.12
ECHDC1-217ENST00000488087 LY6G6CO95867 125 aa1.81□□□□□ -2.12
ECHDC1-217ENST00000488087 DEFB130BP0DP73 79 aa1.81□□□□□ -2.12
ECHDC1-217ENST00000488087 DEFB130AP0DP74 79 aa1.81□□□□□ -2.12
ECHDC1-217ENST00000488087 Q96NJ1 140 aa1.81□□□□□ -2.12
ECHDC1-217ENST00000488087 PCNX1Q96RV3 2341 aa1.81□□□□□ -2.12
ECHDC1-217ENST00000488087 CNOT1A5YKK6 2376 aaKnown RBP1.81□□□□□ -2.12
ECHDC1-217ENST00000488087 SMG1Q96Q15 3661 aaKnown RBP1.81□□□□□ -2.12
ECHDC1-217ENST00000488087 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
ECHDC1-217ENST00000488087 ROS1P08922 2347 aa1.8□□□□□ -2.12
ECHDC1-217ENST00000488087 DMXL2Q8TDJ6 3036 aa1.8□□□□□ -2.12
ECHDC1-217ENST00000488087 A0A096LPF7 62 aa1.8□□□□□ -2.12
ECHDC1-217ENST00000488087 DEFB136Q30KP8 78 aa1.8□□□□□ -2.12
ECHDC1-217ENST00000488087 KRTAP13-1Q8IUC0 172 aa1.8□□□□□ -2.12
ECHDC1-217ENST00000488087 C20orf166-AS1Q96NR2 134 aa1.8□□□□□ -2.12
ECHDC1-217ENST00000488087 CCL19Q99731 98 aa1.8□□□□□ -2.12
ECHDC1-217ENST00000488087 SPEGQ15772 3267 aa1.8□□□□□ -2.12
ECHDC1-217ENST00000488087 CEP250Q9BV73 2442 aa1.8□□□□□ -2.12
ECHDC1-217ENST00000488087 MYO15AQ9UKN7 3530 aa1.79□□□□□ -2.12
ECHDC1-217ENST00000488087 LINC01556Q5JQF7 62 aa1.79□□□□□ -2.12
ECHDC1-217ENST00000488087 EP300Q09472 2414 aaPredicted RBP1.79□□□□□ -2.12
ECHDC1-217ENST00000488087 TACC2O95359 2948 aa1.79□□□□□ -2.12
ECHDC1-217ENST00000488087 CELSR3Q9NYQ7 3312 aa1.79□□□□□ -2.12
ECHDC1-217ENST00000488087 ZFHX4Q86UP3 3567 aa1.78□□□□□ -2.12
ECHDC1-217ENST00000488087 AKAP9Q99996 3911 aa1.78□□□□□ -2.12
ECHDC1-217ENST00000488087 A0A087WTM6 91 aa1.78□□□□□ -2.12
ECHDC1-217ENST00000488087 TRIOBPQ9H2D6 2365 aa1.78□□□□□ -2.12
ECHDC1-217ENST00000488087 ANKHD1Q8IWZ3 2542 aaKnown RBP1.77□□□□□ -2.13
ECHDC1-217ENST00000488087 APC2O95996 2303 aa1.77□□□□□ -2.13
ECHDC1-217ENST00000488087 SPART-AS1P0CW21 52 aa1.77□□□□□ -2.13
ECHDC1-217ENST00000488087 DEFB113Q30KQ7 82 aa1.77□□□□□ -2.13
ECHDC1-217ENST00000488087 CSMD1Q96PZ7 3565 aa1.77□□□□□ -2.13
ECHDC1-217ENST00000488087 CHD6Q8TD26 2715 aa1.77□□□□□ -2.13
ECHDC1-217ENST00000488087 MAP1AP78559 2803 aaPredicted RBP1.76□□□□□ -2.13
ECHDC1-217ENST00000488087 TPRP12270 2363 aaKnown RBP1.76□□□□□ -2.13
ECHDC1-217ENST00000488087 NBPF19A0A087WUL8 3843 aa1.76□□□□□ -2.13
ECHDC1-217ENST00000488087 DEFB124Q8NES8 71 aa1.76□□□□□ -2.13
ECHDC1-217ENST00000488087 COL6A6A6NMZ7 2263 aa1.75□□□□□ -2.13
ECHDC1-217ENST00000488087 CEP290O15078 2479 aa1.75□□□□□ -2.13
ECHDC1-217ENST00000488087 ABCA2Q9BZC7 2435 aa1.75□□□□□ -2.13
ECHDC1-217ENST00000488087 A0A0G2JQZ4 141 aa1.75□□□□□ -2.13
ECHDC1-217ENST00000488087 H0YAA0 97 aa1.75□□□□□ -2.13
ECHDC1-217ENST00000488087 KRTAP5-7Q6L8G8 165 aa1.75□□□□□ -2.13
ECHDC1-217ENST00000488087 COX6B2Q6YFQ2 88 aa1.75□□□□□ -2.13
ECHDC1-217ENST00000488087 Q6ZSA8 131 aa1.75□□□□□ -2.13
ECHDC1-217ENST00000488087 RP1L1Q8IWN7 2480 aaPredicted RBP1.75□□□□□ -2.13
ECHDC1-217ENST00000488087 DCHS2Q6V1P9 2916 aa1.74□□□□□ -2.13
ECHDC1-217ENST00000488087 PRRC2CQ9Y520 2896 aaKnown RBP1.74□□□□□ -2.13
ECHDC1-217ENST00000488087 DNAH1Q9P2D7 4330 aa1.74□□□□□ -2.13
ECHDC1-217ENST00000488087 BOD1L1Q8NFC6 3051 aa1.74□□□□□ -2.13
ECHDC1-217ENST00000488087 KRTAP12-3P60328 96 aa1.74□□□□□ -2.13
ECHDC1-217ENST00000488087 HRNRQ86YZ3 2850 aaPredicted RBP1.73□□□□□ -2.13
ECHDC1-217ENST00000488087 ADGRG4Q8IZF6 3080 aa1.73□□□□□ -2.13
ECHDC1-217ENST00000488087 PRLHP81277 87 aa1.73□□□□□ -2.13
ECHDC1-217ENST00000488087 H1FX-AS1Q4G0G2 97 aa1.73□□□□□ -2.13
ECHDC1-217ENST00000488087 NCOR1O75376 2440 aa1.73□□□□□ -2.13
ECHDC1-217ENST00000488087 BSNQ9UPA5 3926 aa1.73□□□□□ -2.13
ECHDC1-217ENST00000488087 CELSR1Q9NYQ6 3014 aa1.73□□□□□ -2.13
ECHDC1-217ENST00000488087 PTPRZ1P23471 2315 aaPredicted RBP1.73□□□□□ -2.13
ECHDC1-217ENST00000488087 CACNA1HO95180 2353 aa1.72□□□□□ -2.13
ECHDC1-217ENST00000488087 AKAP6Q13023 2319 aa1.72□□□□□ -2.13
ECHDC1-217ENST00000488087 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.72□□□□□ -2.13
ECHDC1-217ENST00000488087 K7EIL1 84 aa1.72□□□□□ -2.13
ECHDC1-217ENST00000488087 PSORS1C2Q9UIG4 136 aa1.72□□□□□ -2.13
ECHDC1-217ENST00000488087 C2CD3Q4AC94 2353 aa1.71□□□□□ -2.14
ECHDC1-217ENST00000488087 TENM2Q9NT68 2774 aa1.71□□□□□ -2.14
ECHDC1-217ENST00000488087 CREBBPQ92793 2442 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms