RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 LINC00304Q8N9R0 145 aa6.89□□□□□ -1.31
APTX-227ENST00000485479 PSMB2P49721 201 aa6.89□□□□□ -1.31
APTX-227ENST00000485479 Q8N377 158 aa6.89□□□□□ -1.31
APTX-227ENST00000485479 RETNLBQ9BQ08 111 aa6.88□□□□□ -1.31
APTX-227ENST00000485479 SMIM29Q86T20 159 aa6.88□□□□□ -1.31
APTX-227ENST00000485479 LPAP08519 4548 aa6.87□□□□□ -1.31
APTX-227ENST00000485479 IGLV5-48A0A075B6I7 105 aa6.87□□□□□ -1.31
APTX-227ENST00000485479 TEX49A0A1B0GTD5 131 aa6.87□□□□□ -1.31
APTX-227ENST00000485479 SPRR1BP22528 89 aa6.87□□□□□ -1.31
APTX-227ENST00000485479 HRCT1Q6UXD1 115 aa6.86□□□□□ -1.31
APTX-227ENST00000485479 M0R143 59 aa6.86□□□□□ -1.31
APTX-227ENST00000485479 LRP2P98164 4655 aa6.85□□□□□ -1.31
APTX-227ENST00000485479 LAMTOR3Q9UHA4 124 aa6.85□□□□□ -1.31
APTX-227ENST00000485479 H0YGX0 51 aa6.84□□□□□ -1.32
APTX-227ENST00000485479 A0A1B0GV72 72 aa6.82□□□□□ -1.32
APTX-227ENST00000485479 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.82□□□□□ -1.32
APTX-227ENST00000485479 SCGB1C2P0DMR2 95 aa6.81□□□□□ -1.32
APTX-227ENST00000485479 PRR4Q16378 134 aa6.81□□□□□ -1.32
APTX-227ENST00000485479 PCP4L1A6NKN8 68 aa6.8□□□□□ -1.32
APTX-227ENST00000485479 SSBP3-AS1Q7Z2R9 100 aa6.8□□□□□ -1.32
APTX-227ENST00000485479 H3BUT2 72 aa6.8□□□□□ -1.32
APTX-227ENST00000485479 COX6CP09669 75 aa6.8□□□□□ -1.32
APTX-227ENST00000485479 UBR4Q5T4S7 5183 aa6.78□□□□□ -1.32
APTX-227ENST00000485479 FABP2P12104 132 aa6.78□□□□□ -1.32
APTX-227ENST00000485479 SNHG12Q9BXW3 62 aa6.78□□□□□ -1.32
APTX-227ENST00000485479 F8WEM9 126 aa6.77□□□□□ -1.33
APTX-227ENST00000485479 DNAL4O96015 105 aa6.77□□□□□ -1.33
APTX-227ENST00000485479 SNCGO76070 127 aa6.77□□□□□ -1.33
APTX-227ENST00000485479 SPINK1P00995 79 aa6.76□□□□□ -1.33
APTX-227ENST00000485479 SPAG11AQ6PDA7 123 aa6.76□□□□□ -1.33
APTX-227ENST00000485479 LST1O00453 97 aa6.75□□□□□ -1.33
APTX-227ENST00000485479 TCL1BO95988 128 aa6.75□□□□□ -1.33
APTX-227ENST00000485479 A0A1B0GX51 115 aa6.75□□□□□ -1.33
APTX-227ENST00000485479 TAX1BP3O14907 124 aa6.75□□□□□ -1.33
APTX-227ENST00000485479 IGFL1Q6UW32 110 aa6.75□□□□□ -1.33
APTX-227ENST00000485479 ORMDL1Q9P0S3 153 aa6.74□□□□□ -1.33
APTX-227ENST00000485479 NDUFV3P56181 108 aaKnown RBP6.73□□□□□ -1.33
APTX-227ENST00000485479 OCIAD2Q56VL3 154 aa6.73□□□□□ -1.33
APTX-227ENST00000485479 H3BMG7 143 aa6.71□□□□□ -1.33
APTX-227ENST00000485479 PPDPFLQ8WWR9 84 aa6.71□□□□□ -1.33
APTX-227ENST00000485479 TRACP01848 142 aa6.71□□□□□ -1.34
APTX-227ENST00000485479 C9orf118A6NHY6 69 aa6.7□□□□□ -1.34
APTX-227ENST00000485479 MTURNQ8N3F0 131 aa6.7□□□□□ -1.34
APTX-227ENST00000485479 IGLV8-61A0A075B6I0 122 aa6.69□□□□□ -1.34
APTX-227ENST00000485479 IGLV7-46A0A075B6I9 117 aa6.69□□□□□ -1.34
APTX-227ENST00000485479 ATXN8Q156A1 80 aa6.69□□□□□ -1.34
APTX-227ENST00000485479 A0A1W2PPM0 123 aa6.68□□□□□ -1.34
APTX-227ENST00000485479 RPS29P62273 56 aaKnown RBP6.68□□□□□ -1.34
APTX-227ENST00000485479 TMEM256-PLSCR3K7ERE1 68 aa6.67□□□□□ -1.34
APTX-227ENST00000485479 BAALC-AS2P0C853 105 aa6.67□□□□□ -1.34
APTX-227ENST00000485479 Q6JHZ5 121 aa6.67□□□□□ -1.34
APTX-227ENST00000485479 CD164Q04900 197 aa6.66□□□□□ -1.34
APTX-227ENST00000485479 LIMD2Q9BT23 127 aa6.66□□□□□ -1.34
APTX-227ENST00000485479 RNF213Q63HN8 5207 aa6.66□□□□□ -1.34
APTX-227ENST00000485479 TRBV7-7A0A0K0K1E9 115 aa6.65□□□□□ -1.34
APTX-227ENST00000485479 C9JAW5 83 aa6.65□□□□□ -1.34
APTX-227ENST00000485479 COL5A1-AS1Q5SY13 56 aa6.65□□□□□ -1.34
APTX-227ENST00000485479 GHRHP01286 108 aa6.64□□□□□ -1.35
APTX-227ENST00000485479 ANKRD29Q8N6D5 301 aa6.64□□□□□ -1.35
APTX-227ENST00000485479 PCP4P48539 62 aa6.64□□□□□ -1.35
APTX-227ENST00000485479 LYRM7Q5U5X0 104 aa6.64□□□□□ -1.35
APTX-227ENST00000485479 A0A1W2PNM2 257 aa6.63□□□□□ -1.35
APTX-227ENST00000485479 UBE2V1Q13404 147 aa6.62□□□□□ -1.35
APTX-227ENST00000485479 C1orf195Q5TG92 126 aa6.62□□□□□ -1.35
APTX-227ENST00000485479 TRBV20-1A0A075B6N2 111 aa6.62□□□□□ -1.35
APTX-227ENST00000485479 A0A087WSZ3 146 aa6.62□□□□□ -1.35
APTX-227ENST00000485479 VPS25Q9BRG1 176 aa6.62□□□□□ -1.35
APTX-227ENST00000485479 SPCS1Q9Y6A9 102 aa6.62□□□□□ -1.35
APTX-227ENST00000485479 FP248Q71RG6 208 aaPredicted RBP6.61□□□□□ -1.35
APTX-227ENST00000485479 CDIP1Q9H305 208 aa6.6□□□□□ -1.35
APTX-227ENST00000485479 C9orf92A6NGG3 77 aa6.6□□□□□ -1.35
APTX-227ENST00000485479 TPRXLQ17RH7 258 aa6.6□□□□□ -1.35
APTX-227ENST00000485479 KRTAP13-3Q3SY46 172 aa6.6□□□□□ -1.35
APTX-227ENST00000485479 TEN1Q86WV5 123 aa6.6□□□□□ -1.35
APTX-227ENST00000485479 CCKP06307 115 aa6.59□□□□□ -1.35
APTX-227ENST00000485479 RBM3P98179 157 aaKnown RBP6.59□□□□□ -1.35
APTX-227ENST00000485479 MUC2Q02817 5179 aa6.59□□□□□ -1.36
APTX-227ENST00000485479 H3BQ85 93 aa6.58□□□□□ -1.36
APTX-227ENST00000485479 Q5XG85 94 aa6.58□□□□□ -1.36
APTX-227ENST00000485479 TRBV7-4A0A0J9YYF1 115 aa6.58□□□□□ -1.36
APTX-227ENST00000485479 C14orf132Q9NPU4 83 aa6.57□□□□□ -1.36
APTX-227ENST00000485479 Q6Q795 121 aa6.57□□□□□ -1.36
APTX-227ENST00000485479 DSCR8Q96T75 97 aa6.57□□□□□ -1.36
APTX-227ENST00000485479 DEFB116Q30KQ4 102 aa6.54□□□□□ -1.36
APTX-227ENST00000485479 K7EP34 96 aa6.53□□□□□ -1.36
APTX-227ENST00000485479 Q96NJ1 140 aa6.53□□□□□ -1.36
APTX-227ENST00000485479 H3BT86 120 aa6.52□□□□□ -1.37
APTX-227ENST00000485479 ASB16-AS1Q495Z4 193 aa6.52□□□□□ -1.37
APTX-227ENST00000485479 Q6ZQT0 140 aa6.52□□□□□ -1.37
APTX-227ENST00000485479 JMJD7-PLA2G4BH0Y9G9 81 aa6.51□□□□□ -1.37
APTX-227ENST00000485479 XP32Q5T750 250 aa6.51□□□□□ -1.37
APTX-227ENST00000485479 SS18L2Q9UHA2 77 aa6.51□□□□□ -1.37
APTX-227ENST00000485479 LOC100996750A0A140TA64 210 aa6.51□□□□□ -1.37
APTX-227ENST00000485479 KRTAP4-6Q9BYQ5 205 aa6.51□□□□□ -1.37
APTX-227ENST00000485479 OBSCN-AS1Q96MR7 158 aa6.5□□□□□ -1.37
APTX-227ENST00000485479 PRO0461Q9UI25 63 aa6.5□□□□□ -1.37
APTX-227ENST00000485479 LOC110117498A0A087WWA1 95 aa6.48□□□□□ -1.37
APTX-227ENST00000485479 SIGMAR1Q99720 223 aa6.48□□□□□ -1.37
APTX-227ENST00000485479 IGKV4-1P06312 121 aa6.46□□□□□ -1.37
APTX-227ENST00000485479 GTF2H5Q6ZYL4 71 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms