RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 LAMTOR3Q9UHA4 124 aa6.11□□□□□ -1.43
HDAC6-226ENST00000483656 SMR3BP02814 79 aaPredicted RBP6.1□□□□□ -1.43
HDAC6-226ENST00000483656 SPRR4Q96PI1 79 aa6.1□□□□□ -1.43
HDAC6-226ENST00000483656 C14orf132Q9NPU4 83 aa6.1□□□□□ -1.43
HDAC6-226ENST00000483656 JMJD7-PLA2G4BH0Y9G9 81 aa6.09□□□□□ -1.43
HDAC6-226ENST00000483656 GAGE2AQ6NT46 116 aa6.09□□□□□ -1.43
HDAC6-226ENST00000483656 KRTAP10-4P60372 401 aaPredicted RBP6.08□□□□□ -1.44
HDAC6-226ENST00000483656 RBM3P98179 157 aaKnown RBP6.08□□□□□ -1.44
HDAC6-226ENST00000483656 LINC00483Q53H64 154 aa6.08□□□□□ -1.44
HDAC6-226ENST00000483656 RPL37AP61513 92 aaKnown RBP6.07□□□□□ -1.44
HDAC6-226ENST00000483656 LOC110117498A0A087WWA1 95 aa6.06□□□□□ -1.44
HDAC6-226ENST00000483656 TRBV7-4A0A0J9YYF1 115 aa6.06□□□□□ -1.44
HDAC6-226ENST00000483656 K7ERU9 68 aa6.06□□□□□ -1.44
HDAC6-226ENST00000483656 Q6ZQT0 140 aa6.06□□□□□ -1.44
HDAC6-226ENST00000483656 ANAPC11Q9NYG5 84 aa6.06□□□□□ -1.44
HDAC6-226ENST00000483656 UBR4Q5T4S7 5183 aa6.06□□□□□ -1.44
HDAC6-226ENST00000483656 ZNF706Q9Y5V0 76 aaPredicted RBP6.05□□□□□ -1.44
HDAC6-226ENST00000483656 KIAA1109Q2LD37 5005 aa6.05□□□□□ -1.44
HDAC6-226ENST00000483656 IGLV8-61A0A075B6I0 122 aa6.04□□□□□ -1.44
HDAC6-226ENST00000483656 CDK2AP2O75956 126 aa6.04□□□□□ -1.44
HDAC6-226ENST00000483656 CCKP06307 115 aa6.04□□□□□ -1.44
HDAC6-226ENST00000483656 A0A0G2JQZ4 141 aa6.03□□□□□ -1.44
HDAC6-226ENST00000483656 J3QR89 54 aa6.03□□□□□ -1.44
HDAC6-226ENST00000483656 DSCR8Q96T75 97 aa6.03□□□□□ -1.44
HDAC6-226ENST00000483656 A0A1W2PNM2 257 aa6.01□□□□□ -1.45
HDAC6-226ENST00000483656 F8WEM9 126 aa6.01□□□□□ -1.45
HDAC6-226ENST00000483656 KRTAP1-4P0C5Y4 121 aa6.01□□□□□ -1.45
HDAC6-226ENST00000483656 PDE6GP18545 87 aa6.01□□□□□ -1.45
HDAC6-226ENST00000483656 IGFL1Q6UW32 110 aa6.01□□□□□ -1.45
HDAC6-226ENST00000483656 FAM240AA0A1B0GVK7 77 aa6□□□□□ -1.45
HDAC6-226ENST00000483656 SPINK6Q6UWN8 80 aa6□□□□□ -1.45
HDAC6-226ENST00000483656 CDIP1Q9H305 208 aa6□□□□□ -1.45
HDAC6-226ENST00000483656 ABCA13Q86UQ4 5058 aa5.99□□□□□ -1.45
HDAC6-226ENST00000483656 IGLV9-49A0A0B4J1Y8 123 aa5.99□□□□□ -1.45
HDAC6-226ENST00000483656 ACYP1P07311 99 aa5.98□□□□□ -1.45
HDAC6-226ENST00000483656 Q8NBF4 154 aa5.98□□□□□ -1.45
HDAC6-226ENST00000483656 LINC00846Q9NV44 126 aa5.98□□□□□ -1.45
HDAC6-226ENST00000483656 A0A087X002 238 aa5.97□□□□□ -1.45
HDAC6-226ENST00000483656 FAM229BQ4G0N7 80 aa5.97□□□□□ -1.45
HDAC6-226ENST00000483656 KRTAP13-2Q52LG2 175 aa5.97□□□□□ -1.45
HDAC6-226ENST00000483656 Q6JHZ5 121 aa5.97□□□□□ -1.45
HDAC6-226ENST00000483656 VPS25Q9BRG1 176 aa5.97□□□□□ -1.45
HDAC6-226ENST00000483656 FAM229AH3BQW9 127 aa5.96□□□□□ -1.46
HDAC6-226ENST00000483656 MOBPQ13875 183 aa5.96□□□□□ -1.46
HDAC6-226ENST00000483656 C9orf153Q5TBE3 101 aa5.96□□□□□ -1.46
HDAC6-226ENST00000483656 KRTAP4-5Q9BYR2 181 aa5.96□□□□□ -1.46
HDAC6-226ENST00000483656 PLA2G1BP04054 148 aaKnown RBP5.95□□□□□ -1.46
HDAC6-226ENST00000483656 C21orf62-AS1Q17RA5 79 aa5.95□□□□□ -1.46
HDAC6-226ENST00000483656 Q5VSD8 79 aa5.95□□□□□ -1.46
HDAC6-226ENST00000483656 CRYGAP11844 174 aa5.94□□□□□ -1.46
HDAC6-226ENST00000483656 Q6Q795 121 aa5.93□□□□□ -1.46
HDAC6-226ENST00000483656 FAT3Q8TDW7 4589 aa5.92□□□□□ -1.46
HDAC6-226ENST00000483656 HERC1Q15751 4861 aa5.92□□□□□ -1.46
HDAC6-226ENST00000483656 SSBP3-AS1Q7Z2R9 100 aa5.92□□□□□ -1.46
HDAC6-226ENST00000483656 A0A1B0GW54 56 aa5.91□□□□□ -1.46
HDAC6-226ENST00000483656 Q6ZVQ6 151 aa5.91□□□□□ -1.46
HDAC6-226ENST00000483656 Q8N1X5 172 aa5.91□□□□□ -1.46
HDAC6-226ENST00000483656 DMBT1Q9UGM3 2413 aaPredicted RBP5.9□□□□□ -1.46
HDAC6-226ENST00000483656 PRR26Q8N8Z3 221 aa5.9□□□□□ -1.46
HDAC6-226ENST00000483656 A0A087WSZ3 146 aa5.89□□□□□ -1.47
HDAC6-226ENST00000483656 TRBV7-7A0A0K0K1E9 115 aa5.89□□□□□ -1.47
HDAC6-226ENST00000483656 MT-ATP8P03928 68 aa5.89□□□□□ -1.47
HDAC6-226ENST00000483656 HRCT1Q6UXD1 115 aa5.89□□□□□ -1.47
HDAC6-226ENST00000483656 LINC00643Q86TS7 51 aa5.89□□□□□ -1.47
HDAC6-226ENST00000483656 LRP1Q07954 4544 aaKnown RBP5.88□□□□□ -1.47
HDAC6-226ENST00000483656 UBL5Q9BZL1 73 aa5.88□□□□□ -1.47
HDAC6-226ENST00000483656 TNXBP22105 4242 aa5.88□□□□□ -1.47
HDAC6-226ENST00000483656 TYMSOSQ8TAI1 123 aa5.87□□□□□ -1.47
HDAC6-226ENST00000483656 CD164Q04900 197 aa5.86□□□□□ -1.47
HDAC6-226ENST00000483656 NREPQ16612 68 aa5.86□□□□□ -1.47
HDAC6-226ENST00000483656 IGKV3D-7A0A0C4DH55 119 aa5.85□□□□□ -1.47
HDAC6-226ENST00000483656 SIGMAR1Q99720 223 aa5.85□□□□□ -1.47
HDAC6-226ENST00000483656 LINC00472Q9H8W2 130 aa5.83□□□□□ -1.48
HDAC6-226ENST00000483656 KRTAP10-8P60410 259 aa5.82□□□□□ -1.48
HDAC6-226ENST00000483656 Q96NJ1 140 aa5.82□□□□□ -1.48
HDAC6-226ENST00000483656 DEFB116Q30KQ4 102 aa5.81□□□□□ -1.48
HDAC6-226ENST00000483656 ATP5EP2Q5VTU8 51 aa5.81□□□□□ -1.48
HDAC6-226ENST00000483656 BPY2O14599 106 aa5.8□□□□□ -1.48
HDAC6-226ENST00000483656 DSCR10P59022 87 aa5.8□□□□□ -1.48
HDAC6-226ENST00000483656 CXCL6P80162 114 aa5.8□□□□□ -1.48
HDAC6-226ENST00000483656 Q5XG85 94 aa5.8□□□□□ -1.48
HDAC6-226ENST00000483656 LINC00304Q8N9R0 145 aa5.8□□□□□ -1.48
HDAC6-226ENST00000483656 MYCBP2O75592 4640 aa5.79□□□□□ -1.48
HDAC6-226ENST00000483656 ASB16-AS1Q495Z4 193 aa5.79□□□□□ -1.48
HDAC6-226ENST00000483656 SS18L2Q9UHA2 77 aa5.79□□□□□ -1.48
HDAC6-226ENST00000483656 FLG2Q5D862 2391 aaPredicted RBP5.79□□□□□ -1.48
HDAC6-226ENST00000483656 Q8N9L7 120 aa5.78□□□□□ -1.48
HDAC6-226ENST00000483656 SPINK1P00995 79 aa5.77□□□□□ -1.49
HDAC6-226ENST00000483656 C4orf48Q5BLP8 95 aa5.77□□□□□ -1.49
HDAC6-226ENST00000483656 SPAG11AQ6PDA7 123 aa5.77□□□□□ -1.49
HDAC6-226ENST00000483656 IMUPQ9GZP8 106 aa5.77□□□□□ -1.49
HDAC6-226ENST00000483656 A0A087WVE0 104 aa5.76□□□□□ -1.49
HDAC6-226ENST00000483656 IGKV4-1P06312 121 aa5.76□□□□□ -1.49
HDAC6-226ENST00000483656 MT1HL1P0DM35 61 aa5.76□□□□□ -1.49
HDAC6-226ENST00000483656 RPS29P62273 56 aaKnown RBP5.75□□□□□ -1.49
HDAC6-226ENST00000483656 C1orf195Q5TG92 126 aa5.75□□□□□ -1.49
HDAC6-226ENST00000483656 J3KT08 172 aa5.74□□□□□ -1.49
HDAC6-226ENST00000483656 K7EQZ3 153 aa5.74□□□□□ -1.49
HDAC6-226ENST00000483656 HIST1H4AP62805 103 aaKnown RBP5.74□□□□□ -1.49
HDAC6-226ENST00000483656 LIMD2Q9BT23 127 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 220.6 ms